Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 145-310 |
| Cow position: | chr28:3823131-3822961 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 148-356 |
| Cow position: | chr28:1202234-1202019 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 153-289 |
| Cow position: | chr28:20963514-20963374 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 153-330 |
| Cow position: | chr28:34749752-34749935 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 155-313 |
| Cow position: | chr28:28640880-28641034 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 5 |
| Conread position: | 159-317 |
| Cow position: | chr28:23668761-23668598 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 88 |
| Conread position: | 159-322 |
| Cow position: | chr28:25825841-25825673 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 159-324 |
| Cow position: | chr28:15081900-15081733 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 162-289 |
| Cow position: | chr28:8335987-8336116 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 65, 74 |
| Conread position: | 163-310 |
| Cow position: | chr28:22421958-22421812 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 163-321 |
| Cow position: | chr28:3940170-3940001 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 163-326 |
| Cow position: | chr28:15406087-15406250 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 166-286 |
| Cow position: | chr28:7540128-7540007 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 166-289 |
| Cow position: | chr28:25340302-25340424 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 166-301 |
| Cow position: | chr28:7805393-7805255 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 166-324 |
| Cow position: | chr28:31165953-31165788 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 166-326 |
| Cow position: | chr28:19253512-19253673 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 119, 61 |
| Conread position: | 166-327 |
| Cow position: | chr28:11181132-11180968 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 166-330 |
| Cow position: | chr28:3769635-3769464 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 166-336 |
| Cow position: | chr28:9294464-9294289 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 167-329 |
| Cow position: | chr28:22331088-22331250 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 168-289 |
| Cow position: | chr28:34199076-34198953 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 168-310 |
| Cow position: | chr28:5979954-5980097 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 168-326 |
| Cow position: | chr28:6643251-6643085 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 153 |
| Conread position: | 169-345 |
| Cow position: | chr28:17625140-17624958 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 170-311 |
| Cow position: | chr28:12999127-12999275 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 170-322 |
| Cow position: | chr28:5406588-5406734 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 170-324 |
| Cow position: | chr28:19465363-19465196 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 180-318 |
| Cow position: | chr28:27987918-27988054 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 55 |
Show alignments to all cow chromosomes.