Cow genome map
| Conread name: | recc2802c_j11.y1 |
| Conread position: | 146-330 |
| Cow position: | chr8:15686391-15686195 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 95 |
| Conread position: | 148-324 |
| Cow position: | chr8:41318053-41318236 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 148-329 |
| Cow position: | chr8:51695368-51695185 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 153-348 |
| Cow position: | chr8:15861901-15861705 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 159-287 |
| Cow position: | chr8:13810232-13810360 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 75 |
| Conread position: | 159-288 |
| Cow position: | chr8:33510595-33510460 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 159-289 |
| Cow position: | chr8:37487270-37487137 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 159-289 |
| Cow position: | chr8:46203295-46203426 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 159-297 |
| Cow position: | chr8:32984075-32983933 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 164-287 |
| Cow position: | chr8:13975923-13976048 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 165-330 |
| Cow position: | chr8:20682428-20682603 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 166-288 |
| Cow position: | chr8:6469131-6469007 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 166-289 |
| Cow position: | chr8:24426690-24426814 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 166-289 |
| Cow position: | chr8:49265267-49265142 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 166-292 |
| Cow position: | chr8:8134464-8134339 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 166-292 |
| Cow position: | chr8:20832289-20832160 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 166-301 |
| Cow position: | chr8:49599888-49599752 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 166-301 |
| Cow position: | chr8:50266323-50266462 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 166-303 |
| Cow position: | chr8:55829311-55829169 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 166-310 |
| Cow position: | chr8:18743531-18743679 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 166-310 |
| Cow position: | chr8:24766928-24766783 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 166-310 |
| Cow position: | chr8:49510858-49510720 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 166-310 |
| Cow position: | chr8:49576966-49577113 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 166-319 |
| Cow position: | chr8:9583508-9583349 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 166-322 |
| Cow position: | chr8:20892368-20892526 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 166-322 |
| Cow position: | chr8:27294764-27294924 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 166-322 |
| Cow position: | chr8:29413927-29414085 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 166-323 |
| Cow position: | chr8:19171578-19171420 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 166-325 |
| Cow position: | chr8:33218919-33218752 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 155 |
| Conread position: | 166-325 |
| Cow position: | chr8:36274299-36274131 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 166-326 |
| Cow position: | chr8:21282094-21282258 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 166-327 |
| Cow position: | chr8:39017740-39017908 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 166-329 |
| Cow position: | chr8:15536963-15536792 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 166-329 |
| Cow position: | chr8:60949708-60949543 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 166-330 |
| Cow position: | chr8:26228991-26229153 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 166-330 |
| Cow position: | chr8:51905003-51904832 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 166-334 |
| Cow position: | chr8:55305116-55305292 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 166-339 |
| Cow position: | chr8:35218401-35218581 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 167-326 |
| Cow position: | chr8:59507041-59506879 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 168-284 |
| Cow position: | chr8:6330714-6330833 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 170-318 |
| Cow position: | chr8:32277981-32277834 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 170-321 |
| Cow position: | chr8:28221527-28221371 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 170-324 |
| Cow position: | chr8:23030671-23030830 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 170-326 |
| Cow position: | chr8:39967768-39967609 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 170-332 |
| Cow position: | chr8:36471580-36471748 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 170-345 |
| Cow position: | chr8:37007779-37007601 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 172-330 |
| Cow position: | chr8:13900439-13900606 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 180-332 |
| Cow position: | chr8:20052871-20052710 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 181-321 |
| Cow position: | chr8:53866150-53866296 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 139 |
| Conread position: | 196-334 |
| Cow position: | chr8:5512433-5512570 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 42 |
Show alignments to all cow chromosomes.