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Cow genome map

           
Conread name:
           
recc2803c_c14.y1
        

               
Conread position:
               
1-155
               

               
Cow position:
               
chr12:13995632-13995788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr12:36261856-36261627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr12:9130065-9129770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr12:22284960-22285386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr12:27563217-27563723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
2-131
               

               
Cow position:
               
chr12:6719551-6719421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr12:27663829-27663980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-153
               

               
Cow position:
               
chr12:37718607-37718759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr12:12699477-12699636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr12:35137082-35136923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chr12:3454858-3454697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr12:1089229-1089395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr12:22048085-22047919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr12:43619444-43619278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr12:19272529-19272706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr12:37945785-37945962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr12:43474919-43474730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr12:14986908-14986704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr12:43974453-43974236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 163
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr12:38154907-38155133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr12:6187948-6188180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr12:15496058-15495830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr12:10827947-10827713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr12:42923950-42924185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr12:27192205-27192460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr12:16493194-16493462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr12:18582838-18583095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr12:25343945-25343680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr12:35240942-35241205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr12:26749789-26750077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr12:18563323-18563032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr12:14223144-14222852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr12:19261356-19261074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr12:33495396-33495107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr12:10942455-10942153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr12:7110369-7110056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 232
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr12:9766720-9767020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr12:36790652-36790957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr12:16670427-16670118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr12:41658560-41658870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 220
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr12:19258437-19258131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr12:32051681-32051365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr12:4596634-4596313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 237
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr12:13988535-13988219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 226
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr12:15103438-15103113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 232
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr12:33298345-33298038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr12:38126360-38126671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 278
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr12:23446877-23446569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr12:4720105-4719785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
2-329
               

               
Cow position:
               
chr12:42784468-42784139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr12:11547202-11546860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr12:38774084-38774420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr12:15050464-15050800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-353
               

               
Cow position:
               
chr12:28131752-28131392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr12:12301089-12300731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr12:17879144-17879500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr12:4769080-4768724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr12:33976364-33975998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 229
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr12:31948273-31947904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr12:33129415-33129042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr12:29899259-29899670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 230
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr12:5459411-5459028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
314, 16
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr12:35779759-35780180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 178
               

               
Conread position:
               
2-436
               

               
Cow position:
               
chr12:34333277-34332830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr12:20776768-20777225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr12:6960611-6960142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 175
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr12:26783035-26782582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr12:30745877-30745414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr12:18518833-18518368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr12:35770863-35771337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
2-481
               

               
Cow position:
               
chr12:44622521-44622037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr12:30590930-30590454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr12:31530459-31529965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
18, 242
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr12:6410575-6411061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr12:30919595-30919096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 355
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr12:25561527-25561027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:4341574-4342067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:9482141-9482641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:10895393-10895894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:15089677-15089145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:15938109-15938610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:17080427-17079915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:19508403-19508915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:30170813-30170316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:36119129-36118625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 246
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:40910124-40910636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr12:41217229-41216716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
2-508
               

               
Cow position:
               
chr12:35368805-35368292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr12:39486591-39486076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 92
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr12:6241485-6240944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr12:7884519-7885015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr12:18123827-18123324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-533
               

               
Cow position:
               
chr12:35310521-35311043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
3-153
               

               
Cow position:
               
chr12:37742461-37742310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr12:3057249-3057093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chr12:4182129-4182283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr12:31269319-31269045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
3-448
               

               
Cow position:
               
chr12:19502254-19502708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 238
               

               
Conread position:
               
3-507
               

               
Cow position:
               
chr12:19697554-19697066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
3-528
               

               
Cow position:
               
chr12:31228743-31228215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 250
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr12:24152501-24152206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr12:38215867-38216174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr12:24032647-24032352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
4-507
               

               
Cow position:
               
chr12:21393869-21393352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr12:37701689-37701361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 250
               

               
Conread position:
               
5-340
               

               
Cow position:
               
chr12:12637027-12637367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
5-507
               

               
Cow position:
               
chr12:36500789-36501293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr12:26147011-26147217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr12:16056698-16056985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr12:37008553-37008833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr12:29674983-29675272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr12:23836491-23836175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr12:3623848-3623542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr12:46120661-46120982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr12:15414714-15415042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
211, 69
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr12:11587926-11587576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr12:33851513-33851140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr12:5635295-5635708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr12:11057023-11056579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr12:42879856-42879407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
14, 223
               

               
Conread position:
               
7-359
               

               
Cow position:
               
chr12:25280347-25280691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr12:24116218-24116682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr12:23939372-23939121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr12:40360838-40360527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
11-468
               

               
Cow position:
               
chr12:3076473-3076929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
13-456
               

               
Cow position:
               
chr12:41091685-41091233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
17-268
               

               
Cow position:
               
chr12:21780309-21780062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
17-507
               

               
Cow position:
               
chr12:4371393-4370890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chr12:12532347-12532539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
159, 28
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr12:9514512-9514283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 226
               

               
Conread position:
               
18-258
               

               
Cow position:
               
chr12:42749587-42749348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
18-313
               

               
Cow position:
               
chr12:23916983-23916695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
217, 57
               

               
Conread position:
               
18-338
               

               
Cow position:
               
chr12:1998654-1998977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
216, 222
               

               
Conread position:
               
18-406
               

               
Cow position:
               
chr12:23574914-23574524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 244
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr12:45363506-45363095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
215, 53
               

               
Conread position:
               
18-455
               

               
Cow position:
               
chr12:18040461-18040887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
252, 208
               

               
Conread position:
               
18-482
               

               
Cow position:
               
chr12:37993578-37994045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr12:9143528-9143046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 14
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr12:19866388-19865896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr12:22515594-22516082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 62
               

               
Conread position:
               
18-524
               

               
Cow position:
               
chr12:15122469-15121979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
18-531
               

               
Cow position:
               
chr12:17270681-17270178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 216
               

               
Conread position:
               
19-507
               

               
Cow position:
               
chr12:9710062-9710551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 284
               

               
Conread position:
               
20-261
               

               
Cow position:
               
chr12:17478896-17479138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 228
               

               
Conread position:
               
20-276
               

               
Cow position:
               
chr12:46122807-46122552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
20-387
               

               
Cow position:
               
chr12:19400674-19401030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
20-391
               

               
Cow position:
               
chr12:24663262-24662884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
20-506
               

               
Cow position:
               
chr12:42180986-42181483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 54
               

               
Conread position:
               
20-507
               

               
Cow position:
               
chr12:42967137-42966655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 44
               

               
Conread position:
               
21-317
               

               
Cow position:
               
chr12:25027615-25027924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 66
               

               
Conread position:
               
23-507
               

               
Cow position:
               
chr12:5631745-5632220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
24-379
               

               
Cow position:
               
chr12:25917138-25917483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 61
               

               
Conread position:
               
24-385
               

               
Cow position:
               
chr12:28749082-28748712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
26-451
               

               
Cow position:
               
chr12:20850133-20849723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
27-514
               

               
Cow position:
               
chr12:37771001-37770517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 19
               

               
Conread position:
               
28-360
               

               
Cow position:
               
chr12:7299327-7299667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
28-400
               

               
Cow position:
               
chr12:22287410-22287038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
39-434
               

               
Cow position:
               
chr12:43942595-43942206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
39-437
               

               
Cow position:
               
chr12:30661826-30662227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 52
               

               
Conread position:
               
39-460
               

               
Cow position:
               
chr12:41159713-41159297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 123
               

               
Conread position:
               
39-517
               

               
Cow position:
               
chr12:33323371-33323855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
40-310
               

               
Cow position:
               
chr12:3371738-3372004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
42-317
               

               
Cow position:
               
chr12:38184719-38184445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
46-339
               

               
Cow position:
               
chr12:35124008-35123714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
189, 127
               

               
Conread position:
               
46-481
               

               
Cow position:
               
chr12:20479221-20479636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
283, 39
               

               
Conread position:
               
46-557
               

               
Cow position:
               
chr12:26868695-26869191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 116
               

               
Conread position:
               
54-213
               

               
Cow position:
               
chr12:7457434-7457591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
54-507
               

               
Cow position:
               
chr12:42254777-42254315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
55-288
               

               
Cow position:
               
chr12:24222412-24222641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
55-382
               

               
Cow position:
               
chr12:15762804-15763129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
179, 94
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr12:9914900-9914494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
65-332
               

               
Cow position:
               
chr12:3599662-3599919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
65-400
               

               
Cow position:
               
chr12:10575703-10575362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
66-454
               

               
Cow position:
               
chr12:3950245-3950645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 206
               

               
Conread position:
               
66-507
               

               
Cow position:
               
chr12:1773562-1774009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 175
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr12:44920126-44919859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
203, 19
               

               
Conread position:
               
67-459
               

               
Cow position:
               
chr12:7000507-7000888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 57
               

               
Conread position:
               
67-511
               

               
Cow position:
               
chr12:45820268-45820707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 228
               

               
Conread position:
               
67-514
               

               
Cow position:
               
chr12:31959977-31959540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 104
               

               
Conread position:
               
68-268
               

               
Cow position:
               
chr12:16341986-16341790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
68-317
               

               
Cow position:
               
chr12:7882390-7882141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 29
               

               
Conread position:
               
70-419
               

               
Cow position:
               
chr12:17774889-17774546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 167
               

               
Conread position:
               
71-507
               

               
Cow position:
               
chr12:45160424-45160855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
78-503
               

               
Cow position:
               
chr12:7978124-7977708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 86
               

               
Conread position:
               
82-395
               

               
Cow position:
               
chr12:4162272-4162606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 223
               

               
Conread position:
               
83-507
               

               
Cow position:
               
chr12:15173905-15173473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 143
               

               
Conread position:
               
85-299
               

               
Cow position:
               
chr12:44733012-44733225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 161
               

               
Conread position:
               
85-386
               

               
Cow position:
               
chr12:18103532-18103817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
142, 95
               

               
Conread position:
               
85-404
               

               
Cow position:
               
chr12:29770499-29770817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
158, 83
               

               
Conread position:
               
85-502
               

               
Cow position:
               
chr12:47929280-47928874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 67
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr12:25188267-25188025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 157
               

               
Conread position:
               
86-385
               

               
Cow position:
               
chr12:27037371-27037671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 161
               

               
Conread position:
               
86-453
               

               
Cow position:
               
chr12:41474168-41473802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 172
               

               
Conread position:
               
86-479
               

               
Cow position:
               
chr12:44517659-44518058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 150
               

               
Conread position:
               
86-524
               

               
Cow position:
               
chr12:18943579-18944013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
87-312
               

               
Cow position:
               
chr12:4821039-4820809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 145
               

               
Conread position:
               
87-441
               

               
Cow position:
               
chr12:25320992-25320642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
183, 75
               

               
Conread position:
               
87-457
               

               
Cow position:
               
chr12:5714704-5714332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
88-507
               

               
Cow position:
               
chr12:21486653-21486250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
90-406
               

               
Cow position:
               
chr12:24211482-24211170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
149, 73
               

               
Conread position:
               
90-533
               

               
Cow position:
               
chr12:29483811-29484258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 81
               

               
Conread position:
               
91-384
               

               
Cow position:
               
chr12:45680351-45680046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
174, 138
               

               
Conread position:
               
91-412
               

               
Cow position:
               
chr12:28213583-28213266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
223, 46
               

               
Conread position:
               
91-422
               

               
Cow position:
               
chr12:18765899-18766243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
96, 102
               

               
Conread position:
               
91-433
               

               
Cow position:
               
chr12:39465653-39465305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 181
               

               
Conread position:
               
91-457
               

               
Cow position:
               
chr12:5906130-5905760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 246
               

               
Conread position:
               
91-458
               

               
Cow position:
               
chr12:22882129-22881754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
91-460
               

               
Cow position:
               
chr12:21922524-21922136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
91-506
               

               
Cow position:
               
chr12:31429497-31429901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
91-507
               

               
Cow position:
               
chr12:30753793-30753380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
91-507
               

               
Cow position:
               
chr12:45814188-45814610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
91-517
               

               
Cow position:
               
chr12:2813301-2812870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr12:30605093-30605484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 51
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr12:2711571-2711146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 83
               

               
Conread position:
               
95-518
               

               
Cow position:
               
chr12:34465934-34466354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 201
               

               
Conread position:
               
96-317
               

               
Cow position:
               
chr12:42174485-42174268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
174, 85
               

               
Conread position:
               
97-470
               

               
Cow position:
               
chr12:33458215-33457838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
142, 77
               

               
Conread position:
               
101-377
               

               
Cow position:
               
chr12:22540271-22539987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 184
               

               
Conread position:
               
101-385
               

               
Cow position:
               
chr12:18963864-18964151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
169, 127
               

               
Conread position:
               
101-385
               

               
Cow position:
               
chr12:35378266-35377977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
101-457
               

               
Cow position:
               
chr12:29995400-29995759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 88
               

               
Conread position:
               
101-464
               

               
Cow position:
               
chr12:15531118-15530759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
166, 36
               

               
Conread position:
               
101-485
               

               
Cow position:
               
chr12:8868818-8869206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 63
               

               
Conread position:
               
105-317
               

               
Cow position:
               
chr12:15038916-15039128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
165, 141
               

               
Conread position:
               
106-385
               

               
Cow position:
               
chr12:3906529-3906246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
164, 10
               

               
Conread position:
               
106-482
               

               
Cow position:
               
chr12:7098800-7098432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
164, 65
               

               
Conread position:
               
107-327
               

               
Cow position:
               
chr12:15230758-15230981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
107-459
               

               
Cow position:
               
chr12:12682092-12682452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
111-383
               

               
Cow position:
               
chr12:25452393-25452668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
147, 126
               

               
Conread position:
               
116-507
               

               
Cow position:
               
chr12:27992779-27993171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
154, 5
               

               
Conread position:
               
118-318
               

               
Cow position:
               
chr12:9894829-9894632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
152, 108
               

               
Conread position:
               
120-328
               

               
Cow position:
               
chr12:6102783-6102990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
148, 82
               

               
Conread position:
               
121-404
               

               
Cow position:
               
chr12:5658033-5658320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
124-359
               

               
Cow position:
               
chr12:10491312-10491079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
125-382
               

               
Cow position:
               
chr12:12578993-12579244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 88
               

               
Conread position:
               
138-492
               

               
Cow position:
               
chr12:20326801-20326443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
138-526
               

               
Cow position:
               
chr12:34007328-34006931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
140-508
               

               
Cow position:
               
chr12:19869488-19869125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 64
               

               
Conread position:
               
141-445
               

               
Cow position:
               
chr12:941664-941347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
143-417
               

               
Cow position:
               
chr12:40028732-40029012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 208
               

               
Conread position:
               
143-460
               

               
Cow position:
               
chr12:28582486-28582792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
143-474
               

               
Cow position:
               
chr12:19664510-19664827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
144-470
               

               
Cow position:
               
chr12:3056153-3055826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
145-445
               

               
Cow position:
               
chr12:12178943-12178636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
149-457
               

               
Cow position:
               
chr12:3955757-3956072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
181-507
               

               
Cow position:
               
chr12:2241905-2242235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
186-447
               

               
Cow position:
               
chr12:41214342-41214605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
189-355
               

               
Cow position:
               
chr12:30227254-30227422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr12:25820454-25820652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
189-385
               

               
Cow position:
               
chr12:38511860-38512064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 179
               

               
Conread position:
               
189-385
               

               
Cow position:
               
chr12:44559562-44559364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
189-436
               

               
Cow position:
               
chr12:12699788-12700051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
189-456
               

               
Cow position:
               
chr12:25456095-25455818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
189-457
               

               
Cow position:
               
chr12:26317441-26317162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 193
               

               
Conread position:
               
189-468
               

               
Cow position:
               
chr12:28650933-28650649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 150
               

               
Conread position:
               
189-507
               

               
Cow position:
               
chr12:40807372-40807050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 7
               

               
Conread position:
               
190-357
               

               
Cow position:
               
chr12:5639122-5638947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr12:18021567-18021374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
190-398
               

               
Cow position:
               
chr12:30476457-30476239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr12:12030853-12031075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 180
               

               
Conread position:
               
190-449
               

               
Cow position:
               
chr12:40110357-40110100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
190-474
               

               
Cow position:
               
chr12:3510535-3510252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
190-482
               

               
Cow position:
               
chr12:29411514-29411805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr12:11583365-11583060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr12:44595835-44596160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 263
               

               
Conread position:
               
192-457
               

               
Cow position:
               
chr12:19715063-19715324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
192-459
               

               
Cow position:
               
chr12:36954408-36954674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
193-516
               

               
Cow position:
               
chr12:2670238-2669919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
194-423
               

               
Cow position:
               
chr12:3994929-3994686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
194-516
               

               
Cow position:
               
chr12:32391819-32391489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
196-428
               

               
Cow position:
               
chr12:17702257-17702501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr12:24107584-24107802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
204-436
               

               
Cow position:
               
chr12:44846348-44846117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
204-503
               

               
Cow position:
               
chr12:18572591-18572295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
212-420
               

               
Cow position:
               
chr12:46673277-46673489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
220-460
               

               
Cow position:
               
chr12:34473676-34473913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
220-507
               

               
Cow position:
               
chr12:5800982-5800692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
223-457
               

               
Cow position:
               
chr12:29694102-29694334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
224-507
               

               
Cow position:
               
chr12:3039448-3039169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
226-506
               

               
Cow position:
               
chr12:2805109-2805389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
227-528
               

               
Cow position:
               
chr12:28010959-28011271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
228-507
               

               
Cow position:
               
chr12:19419998-19420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
230-492
               

               
Cow position:
               
chr12:34385578-34385845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
235-492
               

               
Cow position:
               
chr12:9465531-9465791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr12:18076465-18076190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
237-507
               

               
Cow position:
               
chr12:9413853-9414112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr12:27803124-27803407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
238-518
               

               
Cow position:
               
chr12:1284532-1284817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr12:29161889-29162073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
240-457
               

               
Cow position:
               
chr12:40270166-40270383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 108
               

               
Conread position:
               
240-493
               

               
Cow position:
               
chr12:12017804-12017545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
244-432
               

               
Cow position:
               
chr12:31841364-31841165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
244-482
               

               
Cow position:
               
chr12:9229564-9229805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
247-507
               

               
Cow position:
               
chr12:7311316-7311062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
249-366
               

               
Cow position:
               
chr12:31882264-31882143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
249-450
               

               
Cow position:
               
chr12:4134588-4134375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
250-401
               

               
Cow position:
               
chr12:24180812-24180656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
260-460
               

               
Cow position:
               
chr12:6687766-6687569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
269-469
               

               
Cow position:
               
chr12:46635048-46635255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
271-457
               

               
Cow position:
               
chr12:25805216-25805407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 92
               
Show alignments to all cow chromosomes.