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Cow genome map

           
Conread name:
           
recc2803c_c14.y1
        

               
Conread position:
               
1-268
               

               
Cow position:
               
chr15:15177206-15177467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr15:5571740-5571239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr15:26380857-26380703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chr15:44089275-44089115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:7811641-7811476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:15680954-15680788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:17124581-17124415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:21710219-21710055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:21942942-21943108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:26617825-26617992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:43634140-43633981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr15:44809956-44810122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr15:20566018-20566189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr15:29927854-29928054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr15:53018977-53019180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr15:38420665-38420456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr15:39474045-39473838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr15:22444097-22443886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 162
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr15:7751024-7750797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr15:18073608-18073834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr15:38652713-38652482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr15:9978993-9979221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:37970693-37970934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 234
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr15:42380818-42381066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr15:31028770-31028510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 246
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr15:19554036-19553772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr15:42888945-42888685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr15:41053881-41053611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr15:8444362-8444629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr15:20856589-20856304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr15:40231008-40231288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 202
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr15:29541755-29542054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr15:41528076-41527802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr15:5409004-5408719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr15:37865250-37865559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr15:52126800-52126504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr15:19807833-19807522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 224
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr15:33693482-33693165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 251
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr15:5158261-5158574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 248
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr15:6233125-6232813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr15:22930460-22930142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr15:31929008-31928696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr15:23780181-23779868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr15:30471089-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 229
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr15:1857616-1857956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr15:4418512-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr15:36353556-36353897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr15:16017923-16018279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr15:5717609-5717957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr15:4295650-4296020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 240
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr15:23572799-23572415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr15:31137575-31137191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr15:275533-275919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr15:16439944-16439540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr15:2968224-2968619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 187
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr15:44658256-44658664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
2-414
               

               
Cow position:
               
chr15:225913-225498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
2-414
               

               
Cow position:
               
chr15:6168643-6168210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr15:8006868-8007287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr15:27900615-27900194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr15:47844198-47843797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr15:20391387-20390964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr15:11996138-11995706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr15:23114724-23115152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
181, 18
               

               
Conread position:
               
2-433
               

               
Cow position:
               
chr15:48851603-48851173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
2-436
               

               
Cow position:
               
chr15:12304529-12304968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr15:49922025-49922467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr15:22938877-22938439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 238
               

               
Conread position:
               
2-449
               

               
Cow position:
               
chr15:29810015-29810449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
2-449
               

               
Cow position:
               
chr15:39599339-39599780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr15:38883036-38883502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr15:12722974-12723425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 175
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr15:39405632-39406081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr15:35641902-35642368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr15:5683027-5683483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr15:40957468-40957928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr15:21366300-21365850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr15:286362-286809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 359
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr15:17100814-17100365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr15:19771027-19771478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr15:43914208-43913730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 251
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr15:51427936-51427468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
2-476
               

               
Cow position:
               
chr15:21941958-21941483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 156
               

               
Conread position:
               
2-488
               

               
Cow position:
               
chr15:17233076-17233565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
2-488
               

               
Cow position:
               
chr15:36621291-36621797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr15:795127-794628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr15:20370562-20370079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr15:36391561-36392057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 170
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr15:17870402-17869899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 239
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr15:51822040-51822537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
18, 230
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr15:18605297-18605777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr15:36435092-36435602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 224
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr15:42142763-42143245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:1301036-1301537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:6227286-6226800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:16112284-16112799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:19186733-19186221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:19402895-19403372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:20487311-20486816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:21608833-21608334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 228
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:22939434-22938939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:24616457-24616960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 171
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:28924872-28924372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:43031136-43030625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:43827882-43827379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr15:47990876-47990365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
2-508
               

               
Cow position:
               
chr15:7429856-7430377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 234
               

               
Conread position:
               
2-508
               

               
Cow position:
               
chr15:17084096-17084607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 274
               

               
Conread position:
               
2-508
               

               
Cow position:
               
chr15:20534563-20534052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 313
               

               
Conread position:
               
2-517
               

               
Cow position:
               
chr15:8665717-8665170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 381
               

               
Conread position:
               
2-519
               

               
Cow position:
               
chr15:22531563-22532069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
2-519
               

               
Cow position:
               
chr15:36259707-36259185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr15:20472654-20472132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr15:25208869-25208353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr15:26912178-26911667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr15:30047664-30047122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr15:33284766-33285284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr15:43626354-43626872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
2-525
               

               
Cow position:
               
chr15:4919180-4918644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
2-528
               

               
Cow position:
               
chr15:4138024-4138553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
2-533
               

               
Cow position:
               
chr15:6905429-6905975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
2-533
               

               
Cow position:
               
chr15:25667335-25666794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 170
               

               
Conread position:
               
2-535
               

               
Cow position:
               
chr15:44377161-44377686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
3-144
               

               
Cow position:
               
chr15:51831901-51831759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr15:22242293-22242450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr15:12045650-12045482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr15:32324317-32323932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
3-443
               

               
Cow position:
               
chr15:26158708-26158284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
3-448
               

               
Cow position:
               
chr15:10246104-10245670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
4-453
               

               
Cow position:
               
chr15:52451503-52451970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr15:11658691-11658217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
4-506
               

               
Cow position:
               
chr15:50957919-50957399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 251
               

               
Conread position:
               
4-507
               

               
Cow position:
               
chr15:4754468-4753979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
4-510
               

               
Cow position:
               
chr15:16603721-16604219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr15:7479105-7478893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr15:38935297-38935609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr15:11560622-11560256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
5-505
               

               
Cow position:
               
chr15:6647343-6647843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
5-507
               

               
Cow position:
               
chr15:608036-608553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 234
               

               
Conread position:
               
5-507
               

               
Cow position:
               
chr15:23798629-23798125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr15:24967694-24968210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr15:49131953-49132176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr15:3695531-3695784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr15:38860238-38859976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 188
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr15:25349868-25350142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr15:39286517-39286232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr15:16928195-16927895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
223, 30
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr15:49273856-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr15:36887733-36888102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr15:45584616-45585010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
16, 179
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr15:16667604-16667208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr15:21822033-21821629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 229
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr15:31857483-31857927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr15:24994617-24994177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr15:21803771-21803300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 144
               

               
Conread position:
               
6-507
               

               
Cow position:
               
chr15:31201896-31202402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
14, 184
               

               
Conread position:
               
6-507
               

               
Cow position:
               
chr15:37381523-37382019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
6-507
               

               
Cow position:
               
chr15:45478893-45479404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 359
               

               
Conread position:
               
6-508
               

               
Cow position:
               
chr15:26387905-26388422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 309
               

               
Conread position:
               
6-524
               

               
Cow position:
               
chr15:20459417-20458886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 366
               

               
Conread position:
               
7-390
               

               
Cow position:
               
chr15:41045297-41045686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
7-431
               

               
Cow position:
               
chr15:39598140-39598560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
7-449
               

               
Cow position:
               
chr15:52778629-52778188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
7-470
               

               
Cow position:
               
chr15:21893675-21894145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
8-380
               

               
Cow position:
               
chr15:32241872-32242246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 114
               

               
Conread position:
               
8-386
               

               
Cow position:
               
chr15:244678-245048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
8-476
               

               
Cow position:
               
chr15:22553645-22553158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr15:45530-45023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr15:1330213-1329709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 224
               

               
Conread position:
               
12-356
               

               
Cow position:
               
chr15:8353941-8354289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
16-323
               

               
Cow position:
               
chr15:11424877-11425179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
16-507
               

               
Cow position:
               
chr15:5235086-5234608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 31
               

               
Conread position:
               
17-463
               

               
Cow position:
               
chr15:12785335-12785790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
17-517
               

               
Cow position:
               
chr15:5420976-5420497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
18-158
               

               
Cow position:
               
chr15:14760733-14760593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-162
               

               
Cow position:
               
chr15:16657377-16657521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-168
               

               
Cow position:
               
chr15:16644881-16644732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
18-260
               

               
Cow position:
               
chr15:40947470-40947227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 224
               

               
Conread position:
               
18-268
               

               
Cow position:
               
chr15:13783061-13782815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
18-276
               

               
Cow position:
               
chr15:25571905-25571647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
217, 231
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr15:41624990-41624717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 80
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr15:43114811-43114540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
18-300
               

               
Cow position:
               
chr15:20314389-20314669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 137
               

               
Conread position:
               
18-307
               

               
Cow position:
               
chr15:9465581-9465870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
197, 240
               

               
Conread position:
               
18-312
               

               
Cow position:
               
chr15:14888730-14888443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
226, 52
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr15:24804893-24804589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
217, 73
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr15:40379119-40379414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
252, 144
               

               
Conread position:
               
18-359
               

               
Cow position:
               
chr15:11559445-11559108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
259, 19
               

               
Conread position:
               
18-382
               

               
Cow position:
               
chr15:38837651-38838020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 172
               

               
Conread position:
               
18-385
               

               
Cow position:
               
chr15:23275440-23275806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
50, 162
               

               
Conread position:
               
18-385
               

               
Cow position:
               
chr15:25906825-25907186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
207, 57
               

               
Conread position:
               
18-400
               

               
Cow position:
               
chr15:9622087-9622484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
169, 199
               

               
Conread position:
               
18-400
               

               
Cow position:
               
chr15:39619049-39619448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
195, 14
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr15:23696995-23696622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
18-444
               

               
Cow position:
               
chr15:30001603-30002024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
18-457
               

               
Cow position:
               
chr15:2953226-2952782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 56
               

               
Conread position:
               
18-459
               

               
Cow position:
               
chr15:17418059-17417602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 197
               

               
Conread position:
               
18-467
               

               
Cow position:
               
chr15:11011686-11011251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
160, 28
               

               
Conread position:
               
18-492
               

               
Cow position:
               
chr15:24797896-24797433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 57
               

               
Conread position:
               
18-496
               

               
Cow position:
               
chr15:21420854-21421328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 19
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr15:1055757-1056251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
82, 239
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr15:6969894-6970375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 19
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr15:17196052-17196542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 201
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr15:52482922-52482432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 73
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr15:53101491-53101985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 89
               

               
Conread position:
               
18-557
               

               
Cow position:
               
chr15:26079439-26078924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 57
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr15:39833070-39832795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
215, 130
               

               
Conread position:
               
19-313
               

               
Cow position:
               
chr15:34284502-34284213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
20-261
               

               
Cow position:
               
chr15:15986984-15986737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr15:38037036-38036739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
20-328
               

               
Cow position:
               
chr15:7308249-7307942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 62
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr15:18671540-18671203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
215, 15
               

               
Conread position:
               
20-376
               

               
Cow position:
               
chr15:5443890-5444248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
250, 217
               

               
Conread position:
               
20-382
               

               
Cow position:
               
chr15:21583018-21582649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
184, 204
               

               
Conread position:
               
20-412
               

               
Cow position:
               
chr15:1804424-1804028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 49
               

               
Conread position:
               
20-433
               

               
Cow position:
               
chr15:17762817-17763224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
217, 70
               

               
Conread position:
               
20-436
               

               
Cow position:
               
chr15:38394336-38394747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
20-439
               

               
Cow position:
               
chr15:14740778-14740341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
20-440
               

               
Cow position:
               
chr15:26903102-26903526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
210, 49
               

               
Conread position:
               
20-524
               

               
Cow position:
               
chr15:32980125-32979620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 18
               

               
Conread position:
               
21-238
               

               
Cow position:
               
chr15:6102251-6102039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
180, 91
               

               
Conread position:
               
21-399
               

               
Cow position:
               
chr15:33643001-33643376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
21-507
               

               
Cow position:
               
chr15:23530633-23531120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
23-268
               

               
Cow position:
               
chr15:13395460-13395703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
202, 78
               

               
Conread position:
               
24-507
               

               
Cow position:
               
chr15:21832527-21832027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
24-507
               

               
Cow position:
               
chr15:47274277-47274764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 119
               

               
Conread position:
               
24-521
               

               
Cow position:
               
chr15:38806592-38806087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 202
               

               
Conread position:
               
27-509
               

               
Cow position:
               
chr15:15880834-15881322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 420
               

               
Conread position:
               
31-328
               

               
Cow position:
               
chr15:23866152-23865857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
152, 173
               

               
Conread position:
               
33-354
               

               
Cow position:
               
chr15:50265566-50265246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
237, 206
               

               
Conread position:
               
39-268
               

               
Cow position:
               
chr15:12203474-12203703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-507
               

               
Cow position:
               
chr15:32226938-32226492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 33
               

               
Conread position:
               
40-459
               

               
Cow position:
               
chr15:16583768-16583362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
53-346
               

               
Cow position:
               
chr15:10512327-10512035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
179, 81
               

               
Conread position:
               
53-506
               

               
Cow position:
               
chr15:25585150-25584693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
53-524
               

               
Cow position:
               
chr15:362965-363428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 38
               

               
Conread position:
               
54-310
               

               
Cow position:
               
chr15:36793554-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
172, 222
               

               
Conread position:
               
55-466
               

               
Cow position:
               
chr15:51898169-51898581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 297
               

               
Conread position:
               
57-482
               

               
Cow position:
               
chr15:1297690-1298108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 23
               

               
Conread position:
               
63-247
               

               
Cow position:
               
chr15:40368239-40368423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr15:39316889-39316575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
167, 210
               

               
Conread position:
               
67-382
               

               
Cow position:
               
chr15:22871567-22871880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
210, 71
               

               
Conread position:
               
67-408
               

               
Cow position:
               
chr15:5072131-5071801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
203, 120
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr15:26573333-26573711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 42
               

               
Conread position:
               
67-450
               

               
Cow position:
               
chr15:39621293-39621679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
67-536
               

               
Cow position:
               
chr15:33976742-33976267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 208
               

               
Conread position:
               
68-254
               

               
Cow position:
               
chr15:36388245-36388431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
69-317
               

               
Cow position:
               
chr15:28258500-28258253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
171, 13
               

               
Conread position:
               
70-306
               

               
Cow position:
               
chr15:35441122-35440884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 94
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr15:5929853-5930092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
70-524
               

               
Cow position:
               
chr15:6530892-6530424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
70-524
               

               
Cow position:
               
chr15:41000117-40999638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
75-467
               

               
Cow position:
               
chr15:8230607-8230222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
76-402
               

               
Cow position:
               
chr15:17664288-17663970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
83-307
               

               
Cow position:
               
chr15:12617-12843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 213
               

               
Conread position:
               
83-401
               

               
Cow position:
               
chr15:2141334-2141003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 195
               

               
Conread position:
               
83-507
               

               
Cow position:
               
chr15:20422808-20422367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
85-317
               

               
Cow position:
               
chr15:35205181-35204946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
85-456
               

               
Cow position:
               
chr15:27973246-27972868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
85-507
               

               
Cow position:
               
chr15:53353577-53353158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 86
               

               
Conread position:
               
86-268
               

               
Cow position:
               
chr15:14176527-14176347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
86-313
               

               
Cow position:
               
chr15:9781443-9781662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 88
               

               
Conread position:
               
86-346
               

               
Cow position:
               
chr15:12870892-12870628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
183, 150
               

               
Conread position:
               
86-409
               

               
Cow position:
               
chr15:26919303-26918973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 139
               

               
Conread position:
               
86-496
               

               
Cow position:
               
chr15:16307393-16307802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
86-527
               

               
Cow position:
               
chr15:42789176-42788745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
132, 150
               

               
Conread position:
               
87-453
               

               
Cow position:
               
chr15:2145165-2144788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
87-456
               

               
Cow position:
               
chr15:22136663-22137030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
87-466
               

               
Cow position:
               
chr15:34139954-34140337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
87-530
               

               
Cow position:
               
chr15:41418856-41418393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
88-533
               

               
Cow position:
               
chr15:42415228-42415687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 151
               

               
Conread position:
               
90-359
               

               
Cow position:
               
chr15:10608329-10608057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
140, 28
               

               
Conread position:
               
90-459
               

               
Cow position:
               
chr15:45322762-45323133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
90-507
               

               
Cow position:
               
chr15:13554329-13554736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 150
               

               
Conread position:
               
91-353
               

               
Cow position:
               
chr15:37205025-37205287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
186, 137
               

               
Conread position:
               
91-528
               

               
Cow position:
               
chr15:50177086-50177519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
162, 241
               

               
Conread position:
               
92-328
               

               
Cow position:
               
chr15:39326539-39326301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
92-441
               

               
Cow position:
               
chr15:35112904-35112557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
93-341
               

               
Cow position:
               
chr15:9107014-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
177, 34
               

               
Conread position:
               
93-341
               

               
Cow position:
               
chr15:50088959-50089213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 37
               

               
Conread position:
               
93-344
               

               
Cow position:
               
chr15:43599168-43599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 31
               

               
Conread position:
               
93-360
               

               
Cow position:
               
chr15:5726304-5726574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
184, 143
               

               
Conread position:
               
93-482
               

               
Cow position:
               
chr15:15573856-15573448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
93-531
               

               
Cow position:
               
chr15:30981919-30982335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
223, 83
               

               
Conread position:
               
94-434
               

               
Cow position:
               
chr15:50322574-50322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 79
               

               
Conread position:
               
98-507
               

               
Cow position:
               
chr15:20351816-20352236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 132
               

               
Conread position:
               
101-507
               

               
Cow position:
               
chr15:47843264-47842869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 212
               

               
Conread position:
               
102-459
               

               
Cow position:
               
chr15:23768270-23767915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
105-507
               

               
Cow position:
               
chr15:23180431-23180816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
363, 112
               

               
Conread position:
               
106-384
               

               
Cow position:
               
chr15:20046291-20046573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 140
               

               
Conread position:
               
106-443
               

               
Cow position:
               
chr15:40095516-40095176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
106-507
               

               
Cow position:
               
chr15:6385357-6385756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
106-507
               

               
Cow position:
               
chr15:45610843-45610436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
164, 123
               

               
Conread position:
               
107-470
               

               
Cow position:
               
chr15:6421626-6421994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
163, 101
               

               
Conread position:
               
112-486
               

               
Cow position:
               
chr15:12554328-12553945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr15:3726128-3726364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
149, 121
               

               
Conread position:
               
118-524
               

               
Cow position:
               
chr15:23568123-23567712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 231
               

               
Conread position:
               
120-507
               

               
Cow position:
               
chr15:18720320-18720711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 68
               

               
Conread position:
               
120-524
               

               
Cow position:
               
chr15:47280133-47279744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
127-485
               

               
Cow position:
               
chr15:35417612-35417247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
138, 113
               

               
Conread position:
               
127-500
               

               
Cow position:
               
chr15:13387090-13387471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
138-514
               

               
Cow position:
               
chr15:24045076-24044687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
139-459
               

               
Cow position:
               
chr15:24941346-24941036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
142-467
               

               
Cow position:
               
chr15:47105064-47105395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr15:9494268-9493902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
143-512
               

               
Cow position:
               
chr15:41620161-41619784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
143-542
               

               
Cow position:
               
chr15:44640925-44641329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
145-509
               

               
Cow position:
               
chr15:22751481-22751847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr15:16448718-16448888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
149-362
               

               
Cow position:
               
chr15:16904665-16904879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 80
               

               
Conread position:
               
149-507
               

               
Cow position:
               
chr15:30820802-30820426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
99, 88
               

               
Conread position:
               
151-385
               

               
Cow position:
               
chr15:38877267-38877030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
152-367
               

               
Cow position:
               
chr15:12655878-12655657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
172-489
               

               
Cow position:
               
chr15:10615677-10615363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
175-507
               

               
Cow position:
               
chr15:46610993-46611315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
176-506
               

               
Cow position:
               
chr15:41582971-41583312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
180-465
               

               
Cow position:
               
chr15:6586649-6586356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
181-479
               

               
Cow position:
               
chr15:20725549-20725251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
188-539
               

               
Cow position:
               
chr15:23487094-23486741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
189-363
               

               
Cow position:
               
chr15:23927399-23927217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
189-402
               

               
Cow position:
               
chr15:34145079-34144862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
189-423
               

               
Cow position:
               
chr15:10845794-10846036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
189-470
               

               
Cow position:
               
chr15:33303398-33303694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
189-502
               

               
Cow position:
               
chr15:7962152-7962480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
189-505
               

               
Cow position:
               
chr15:52740051-52739729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
189-507
               

               
Cow position:
               
chr15:5498959-5498632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
189-524
               

               
Cow position:
               
chr15:6331964-6331647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
189-534
               

               
Cow position:
               
chr15:4501061-4501403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
190-372
               

               
Cow position:
               
chr15:12441749-12441561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
190-385
               

               
Cow position:
               
chr15:53045803-53045602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
190-395
               

               
Cow position:
               
chr15:36773622-36773408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr15:16657567-16657781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
190-412
               

               
Cow position:
               
chr15:17353574-17353347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
190-462
               

               
Cow position:
               
chr15:14856391-14856131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
190-492
               

               
Cow position:
               
chr15:6046240-6045933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
190-503
               

               
Cow position:
               
chr15:53680684-53680377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr15:5727726-5728035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
190-528
               

               
Cow position:
               
chr15:23775863-23775538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
191-400
               

               
Cow position:
               
chr15:4350526-4350309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
191-529
               

               
Cow position:
               
chr15:13684191-13683864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
192-492
               

               
Cow position:
               
chr15:37716855-37716544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 240
               

               
Conread position:
               
194-482
               

               
Cow position:
               
chr15:36782245-36781964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
194-504
               

               
Cow position:
               
chr15:19119531-19119223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 173
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr15:16936768-16936444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
196-479
               

               
Cow position:
               
chr15:11363096-11362812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
199-492
               

               
Cow position:
               
chr15:53402906-53402620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
204-445
               

               
Cow position:
               
chr15:21522876-21523126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
204-507
               

               
Cow position:
               
chr15:9871327-9871018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
204-507
               

               
Cow position:
               
chr15:51632947-51632648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
204-524
               

               
Cow position:
               
chr15:5535842-5536163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr15:37931672-37931414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
218-418
               

               
Cow position:
               
chr15:36346864-36347078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
220-436
               

               
Cow position:
               
chr15:11629777-11629555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 136
               

               
Conread position:
               
223-479
               

               
Cow position:
               
chr15:12316035-12316293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
225-507
               

               
Cow position:
               
chr15:144126-143837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
227-507
               

               
Cow position:
               
chr15:1830671-1830963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 94
               

               
Conread position:
               
229-479
               

               
Cow position:
               
chr15:18018036-18018278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
231-453
               

               
Cow position:
               
chr15:29792792-29792568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
237-460
               

               
Cow position:
               
chr15:4535032-4535258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
237-464
               

               
Cow position:
               
chr15:38846225-38846451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
237-483
               

               
Cow position:
               
chr15:7827916-7827666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
247-507
               

               
Cow position:
               
chr15:33314317-33314050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 155
               

               
Conread position:
               
248-507
               

               
Cow position:
               
chr15:6082511-6082246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
251-436
               

               
Cow position:
               
chr15:33525553-33525753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
251-469
               

               
Cow position:
               
chr15:14259791-14259578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
260-506
               

               
Cow position:
               
chr15:16786819-16787051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
279-473
               

               
Cow position:
               
chr15:241006-241214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
279-507
               

               
Cow position:
               
chr15:33605087-33605318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
281-460
               

               
Cow position:
               
chr15:31085702-31085885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 65
               
Show alignments to all cow chromosomes.