Cow genome map

Conread name: recc2803c_c14.y1

Conread position: 1-216
Cow position: chr6:50883439-50883651 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 11

Conread position: 1-314
Cow position: chr6:693905-694218 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 80

Conread position: 1-390
Cow position: chr6:4691727-4692136 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 1-436
Cow position: chr6:55545932-55546358 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 317

Conread position: 1-507
Cow position: chr6:47305580-47305060 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 17

Conread position: 2-148
Cow position: chr6:23381427-23381574 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 2-154
Cow position: chr6:54828081-54828234 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 2-155
Cow position: chr6:31928878-31928724 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 2-160
Cow position: chr6:16137528-16137688 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 2-160
Cow position: chr6:28561929-28562086 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 110

Conread position: 2-162
Cow position: chr6:8369663-8369502 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 2-162
Cow position: chr6:16411852-16411691 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 2-162
Cow position: chr6:16627968-16627815 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 36

Conread position: 2-162
Cow position: chr6:32006217-32006374 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 74

Conread position: 2-162
Cow position: chr6:44543908-44544068 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 90

Conread position: 2-162
Cow position: chr6:54840261-54840427 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 2-167
Cow position: chr6:19936329-19936494 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 111

Conread position: 2-167
Cow position: chr6:49686059-49685893 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 2-169
Cow position: chr6:35984895-35985063 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 2-170
Cow position: chr6:62805884-62805715 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 2-178
Cow position: chr6:58697390-58697567 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 2-186
Cow position: chr6:57467838-57467653 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 2-195
Cow position: chr6:26408263-26408457 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 2-201
Cow position: chr6:20076036-20075835 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 2-210
Cow position: chr6:22876689-22876898 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 168

Conread position: 2-213
Cow position: chr6:66259976-66259759 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 178

Conread position: 2-228
Cow position: chr6:30024116-30023900 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 31

Conread position: 2-234
Cow position: chr6:55548295-55548525 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 51

Conread position: 2-240
Cow position: chr6:42483654-42483418 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 99

Conread position: 2-247
Cow position: chr6:55296853-55297098 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 235

Conread position: 2-251
Cow position: chr6:54831717-54831472 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 105

Conread position: 2-265
Cow position: chr6:8366053-8365792 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 235

Conread position: 2-265
Cow position: chr6:26155384-26155130 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 159, 16

Conread position: 2-266
Cow position: chr6:53546268-53546013 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 77

Conread position: 2-268
Cow position: chr6:3330235-3329963 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 241

Conread position: 2-268
Cow position: chr6:56394012-56393748 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 74

Conread position: 2-268
Cow position: chr6:63066076-63065800 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 111

Conread position: 2-269
Cow position: chr6:50504695-50504428 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 68

Conread position: 2-271
Cow position: chr6:47779117-47778846 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 2-271
Cow position: chr6:67728617-67728343 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 2-276
Cow position: chr6:28559779-28559494 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 89

Conread position: 2-286
Cow position: chr6:67451133-67451415 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 232, 36

Conread position: 2-287
Cow position: chr6:62437656-62437370 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 258

Conread position: 2-288
Cow position: chr6:2078577-2078865 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 67

Conread position: 2-288
Cow position: chr6:55417294-55417572 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 74

Conread position: 2-291
Cow position: chr6:12965093-12964805 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 29

Conread position: 2-291
Cow position: chr6:53145441-53145731 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 237

Conread position: 2-300
Cow position: chr6:23024859-23025170 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 193

Conread position: 2-300
Cow position: chr6:51529951-51530243 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 32

Conread position: 2-302
Cow position: chr6:60273772-60274071 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 97, 66

Conread position: 2-307
Cow position: chr6:24536287-24536606 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 2-317
Cow position: chr6:143139-143443 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 74

Conread position: 2-317
Cow position: chr6:8600244-8599932 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 36

Conread position: 2-317
Cow position: chr6:16287828-16288126 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 34

Conread position: 2-318
Cow position: chr6:581501-581819 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 100

Conread position: 2-324
Cow position: chr6:33510028-33509709 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 163

Conread position: 2-328
Cow position: chr6:54207893-54208222 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 2-336
Cow position: chr6:13565324-13564987 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 17

Conread position: 2-351
Cow position: chr6:10039965-10039609 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 18, 281

Conread position: 2-357
Cow position: chr6:22850013-22850363 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 107

Conread position: 2-359
Cow position: chr6:35726329-35725975 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 74

Conread position: 2-359
Cow position: chr6:50467377-50467015 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 233
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 17, 261

Conread position: 2-360
Cow position: chr6:32287870-32287517 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 21, 81

Conread position: 2-363
Cow position: chr6:16266968-16266597 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 357

Conread position: 2-372
Cow position: chr6:53841264-53841630 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 108

Conread position: 2-373
Cow position: chr6:21235286-21234908 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 41

Conread position: 2-373
Cow position: chr6:62670110-62669742 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 232

Conread position: 2-376
Cow position: chr6:21399515-21399892 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 45

Conread position: 2-376
Cow position: chr6:30122928-30123327 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 385

Conread position: 2-378
Cow position: chr6:48988673-48988300 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 230

Conread position: 2-379
Cow position: chr6:55209799-55209418 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 247
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 171

Conread position: 2-385
Cow position: chr6:67574629-67574263 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 153

Conread position: 2-398
Cow position: chr6:31847005-31847380 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 74

Conread position: 2-398
Cow position: chr6:57545990-57546376 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 31

Conread position: 2-401
Cow position: chr6:14913995-14914402 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 49

Conread position: 2-402
Cow position: chr6:60784110-60783706 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 79

Conread position: 2-407
Cow position: chr6:11247007-11246595 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 2-408
Cow position: chr6:15446954-15447378 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 2-409
Cow position: chr6:27888582-27888179 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 28

Conread position: 2-409
Cow position: chr6:47356065-47355653 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 18, 55

Conread position: 2-409
Cow position: chr6:65264312-65264706 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 63

Conread position: 2-410
Cow position: chr6:17313977-17313558 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 137

Conread position: 2-412
Cow position: chr6:60819754-60819341 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 2-418
Cow position: chr6:44566665-44566232 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 274
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 102

Conread position: 2-420
Cow position: chr6:47575130-47574723 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 57

Conread position: 2-429
Cow position: chr6:63251682-63252114 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 128

Conread position: 2-436
Cow position: chr6:10399669-10400093 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 130

Conread position: 2-441
Cow position: chr6:67456978-67456500 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 326
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 19, 246

Conread position: 2-443
Cow position: chr6:20157574-20157120 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 2-450
Cow position: chr6:4469005-4468535 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 111

Conread position: 2-450
Cow position: chr6:53024572-53025010 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 302
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 74

Conread position: 2-454
Cow position: chr6:53460332-53460787 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 2-457
Cow position: chr6:60143960-60144396 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 81

Conread position: 2-458
Cow position: chr6:24468160-24468612 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 2-460
Cow position: chr6:7539812-7539351 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 89

Conread position: 2-460
Cow position: chr6:15300601-15301039 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 71

Conread position: 2-460
Cow position: chr6:38441419-38440960 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 192

Conread position: 2-460
Cow position: chr6:50090884-50090418 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 2-460
Cow position: chr6:66434193-66433726 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 167

Conread position: 2-463
Cow position: chr6:51581016-51581484 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 2-464
Cow position: chr6:24110523-24110078 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 173

Conread position: 2-475
Cow position: chr6:58304651-58304193 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 318
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 34

Conread position: 2-487
Cow position: chr6:15243078-15242588 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 319

Conread position: 2-492
Cow position: chr6:53932606-53933093 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 101

Conread position: 2-501
Cow position: chr6:6067469-6067950 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 336
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 112, 18

Conread position: 2-505
Cow position: chr6:16765159-16765658 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 103

Conread position: 2-506
Cow position: chr6:5095303-5095821 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 2-506
Cow position: chr6:8562953-8562449 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 27

Conread position: 2-507
Cow position: chr6:1769955-1770463 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 237

Conread position: 2-507
Cow position: chr6:2607847-2607346 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 119

Conread position: 2-507
Cow position: chr6:10176060-10176566 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 213

Conread position: 2-507
Cow position: chr6:16700493-16699994 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 127

Conread position: 2-507
Cow position: chr6:18080277-18080782 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 334
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 86

Conread position: 2-507
Cow position: chr6:21004919-21004388 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 263

Conread position: 2-507
Cow position: chr6:28148503-28147983 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 130

Conread position: 2-507
Cow position: chr6:29210716-29210234 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 69

Conread position: 2-507
Cow position: chr6:33302635-33302143 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 81

Conread position: 2-507
Cow position: chr6:35181015-35181520 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 233

Conread position: 2-507
Cow position: chr6:40032418-40031926 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 2-507
Cow position: chr6:46558293-46557790 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 74

Conread position: 2-507
Cow position: chr6:53178865-53178372 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 2-507
Cow position: chr6:54981369-54980834 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 344
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 18, 246

Conread position: 2-507
Cow position: chr6:55609989-55610503 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 332
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 231

Conread position: 2-508
Cow position: chr6:44078754-44078247 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 2-514
Cow position: chr6:6201672-6201172 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 178

Conread position: 2-516
Cow position: chr6:44194317-44194822 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 2-519
Cow position: chr6:48282234-48281713 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 106

Conread position: 2-524
Cow position: chr6:10331859-10332391 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 235

Conread position: 2-524
Cow position: chr6:32122134-32121626 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 81

Conread position: 2-524
Cow position: chr6:43345201-43345739 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 101

Conread position: 2-534
Cow position: chr6:18447276-18447801 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 3-167
Cow position: chr6:8186949-8187114 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 3-167
Cow position: chr6:66293721-66293560 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 33

Conread position: 3-184
Cow position: chr6:54821072-54820890 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 3-216
Cow position: chr6:50771123-50771332 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 158, 0

Conread position: 3-233
Cow position: chr6:58725605-58725380 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 67

Conread position: 3-247
Cow position: chr6:57079664-57079417 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 3-300
Cow position: chr6:6194864-6195168 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 85

Conread position: 3-308
Cow position: chr6:44867309-44867605 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 267, 47

Conread position: 3-317
Cow position: chr6:37395167-37395481 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 15

Conread position: 3-359
Cow position: chr6:10225412-10225759 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 100

Conread position: 3-382
Cow position: chr6:4559065-4559444 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 87

Conread position: 3-382
Cow position: chr6:38610212-38609827 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 76

Conread position: 3-423
Cow position: chr6:34475320-34475735 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 17, 90

Conread position: 3-492
Cow position: chr6:3952759-3952272 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 238

Conread position: 3-494
Cow position: chr6:5609204-5609699 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 187

Conread position: 3-531
Cow position: chr6:10105745-10106292 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 4-233
Cow position: chr6:61110019-61109797 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 73

Conread position: 4-246
Cow position: chr6:12928377-12928143 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 79

Conread position: 4-268
Cow position: chr6:41014737-41015001 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 229

Conread position: 4-332
Cow position: chr6:5330651-5330326 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 109

Conread position: 4-379
Cow position: chr6:43134704-43135082 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 46

Conread position: 4-439
Cow position: chr6:21231749-21231335 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 71

Conread position: 4-463
Cow position: chr6:29240169-29239718 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 4-482
Cow position: chr6:67951194-67950714 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 4-504
Cow position: chr6:46466055-46465563 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 4-524
Cow position: chr6:13687580-13688096 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 70

Conread position: 5-269
Cow position: chr6:57089440-57089171 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 86

Conread position: 5-382
Cow position: chr6:19996851-19996479 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 15, 86

Conread position: 5-392
Cow position: chr6:3596030-3595640 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 117

Conread position: 5-457
Cow position: chr6:61114001-61113531 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 45

Conread position: 5-464
Cow position: chr6:19402081-19401636 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 6-234
Cow position: chr6:48436065-48435844 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 33

Conread position: 6-265
Cow position: chr6:21293263-21293518 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 69

Conread position: 6-300
Cow position: chr6:18144436-18144136 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 39

Conread position: 6-324
Cow position: chr6:5844933-5845254 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 13, 242

Conread position: 6-344
Cow position: chr6:59719046-59718691 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 183

Conread position: 6-377
Cow position: chr6:60118377-60118010 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 14, 67

Conread position: 6-379
Cow position: chr6:48803405-48803779 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 70

Conread position: 6-386
Cow position: chr6:58370982-58370599 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 76

Conread position: 6-391
Cow position: chr6:19264266-19264653 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 23

Conread position: 6-430
Cow position: chr6:37149417-37149002 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 31

Conread position: 6-453
Cow position: chr6:17997082-17997530 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 6-453
Cow position: chr6:32268652-32269083 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 299
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 85

Conread position: 6-460
Cow position: chr6:36203056-36202606 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 69

Conread position: 6-484
Cow position: chr6:38853421-38853903 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 224

Conread position: 6-488
Cow position: chr6:31535338-31535821 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 6-503
Cow position: chr6:61514963-61515461 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 6-507
Cow position: chr6:15937617-15938132 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 202

Conread position: 6-507
Cow position: chr6:47520289-47519783 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 6-507
Cow position: chr6:61269552-61269067 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 340
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 75

Conread position: 7-313
Cow position: chr6:19045862-19045556 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 215

Conread position: 7-447
Cow position: chr6:5113815-5114257 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 8-406
Cow position: chr6:19446486-19446092 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 163

Conread position: 8-445
Cow position: chr6:239686-240145 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 295
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 12, 79

Conread position: 8-514
Cow position: chr6:39358110-39358614 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 11-256
Cow position: chr6:48379381-48379628 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 164

Conread position: 11-291
Cow position: chr6:68816401-68816118 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 16

Conread position: 11-410
Cow position: chr6:39093975-39093572 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 8, 66

Conread position: 11-507
Cow position: chr6:50747229-50746709 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 147

Conread position: 12-436
Cow position: chr6:12091757-12092182 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 222

Conread position: 13-524
Cow position: chr6:51835626-51835116 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 54

Conread position: 16-507
Cow position: chr6:28483241-28482747 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 74

Conread position: 18-201
Cow position: chr6:15587370-15587555 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 0

Conread position: 18-232
Cow position: chr6:61681300-61681088 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 18-236
Cow position: chr6:23109969-23110193 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 169, 0

Conread position: 18-263
Cow position: chr6:42567718-42567472 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 124, 230

Conread position: 18-290
Cow position: chr6:2585163-2584894 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 252, 57

Conread position: 18-296
Cow position: chr6:56986426-56986699 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 252, 156

Conread position: 18-307
Cow position: chr6:8161463-8161756 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 170, 226

Conread position: 18-312
Cow position: chr6:18117829-18118121 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 210, 57

Conread position: 18-312
Cow position: chr6:32044072-32043783 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 218, 231

Conread position: 18-317
Cow position: chr6:24339511-24339210 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 88

Conread position: 18-317
Cow position: chr6:41375992-41375696 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 72

Conread position: 18-339
Cow position: chr6:61523982-61524301 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 219, 64

Conread position: 18-359
Cow position: chr6:16262003-16261666 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 102

Conread position: 18-382
Cow position: chr6:67617725-67618100 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 180, 39

Conread position: 18-383
Cow position: chr6:48010302-48010667 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 248
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 76, 95

Conread position: 18-385
Cow position: chr6:19754856-19755221 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 187, 197

Conread position: 18-397
Cow position: chr6:60740232-60739856 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 50

Conread position: 18-401
Cow position: chr6:15243481-15243088 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 14

Conread position: 18-433
Cow position: chr6:21456455-21456885 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 282
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 99

Conread position: 18-433
Cow position: chr6:63720414-63720004 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 57

Conread position: 18-457
Cow position: chr6:7103017-7103454 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 304
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 261, 63

Conread position: 18-459
Cow position: chr6:41733857-41733406 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 246

Conread position: 18-465
Cow position: chr6:38207264-38207722 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 18-468
Cow position: chr6:4383696-4383263 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 54

Conread position: 18-503
Cow position: chr6:54365107-54365587 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 98

Conread position: 18-507
Cow position: chr6:6264874-6264378 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 54

Conread position: 18-507
Cow position: chr6:15305793-15305321 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 57

Conread position: 18-507
Cow position: chr6:21587212-21587689 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 60

Conread position: 18-507
Cow position: chr6:46292133-46292598 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 323
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 252, 64

Conread position: 18-524
Cow position: chr6:13367504-13367016 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 57

Conread position: 19-464
Cow position: chr6:50984443-50983982 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 13

Conread position: 19-468
Cow position: chr6:16746567-16746110 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 232

Conread position: 20-317
Cow position: chr6:9718697-9718994 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 210, 45

Conread position: 20-317
Cow position: chr6:46173038-46173326 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 252, 53

Conread position: 20-365
Cow position: chr6:62929718-62929368 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 211, 191

Conread position: 20-375
Cow position: chr6:45388541-45388192 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 184, 30

Conread position: 20-433
Cow position: chr6:37467317-37467734 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 101

Conread position: 20-433
Cow position: chr6:58732080-58732509 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 287
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 160, 184

Conread position: 20-445
Cow position: chr6:19696029-19695600 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 116

Conread position: 21-370
Cow position: chr6:1371011-1371356 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 49

Conread position: 21-433
Cow position: chr6:52413081-52412659 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 181

Conread position: 21-507
Cow position: chr6:35842879-35842393 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 85

Conread position: 21-507
Cow position: chr6:35990020-35990496 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 22-507
Cow position: chr6:64432151-64431674 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 42

Conread position: 23-443
Cow position: chr6:445545-445106 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 221

Conread position: 24-413
Cow position: chr6:8125545-8125157 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 225

Conread position: 24-444
Cow position: chr6:38641710-38641292 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 67

Conread position: 30-317
Cow position: chr6:22525536-22525259 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 240, 45

Conread position: 31-374
Cow position: chr6:38640443-38640094 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 208, 54

Conread position: 33-413
Cow position: chr6:59104805-59104433 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 122, 19

Conread position: 39-317
Cow position: chr6:2153395-2153665 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 208, 191

Conread position: 39-355
Cow position: chr6:21514405-21514735 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 198, 18

Conread position: 39-359
Cow position: chr6:36189901-36189577 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 231, 135

Conread position: 39-507
Cow position: chr6:8637478-8637007 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 35

Conread position: 46-273
Cow position: chr6:55502967-55502736 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 80

Conread position: 46-445
Cow position: chr6:45606260-45606655 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 262
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 207

Conread position: 53-458
Cow position: chr6:54431017-54430599 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 174, 62

Conread position: 53-504
Cow position: chr6:40713322-40713763 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 309
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 224, 34

Conread position: 53-505
Cow position: chr6:21590892-21590452 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 320
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 22

Conread position: 53-533
Cow position: chr6:7801208-7801657 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 33

Conread position: 61-340
Cow position: chr6:3592579-3592300 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 159, 109

Conread position: 66-445
Cow position: chr6:54864483-54864873 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 99

Conread position: 67-286
Cow position: chr6:19131606-19131387 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 67-355
Cow position: chr6:58597326-58597620 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 204

Conread position: 67-405
Cow position: chr6:16764470-16764809 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 128, 219

Conread position: 67-523
Cow position: chr6:5302245-5302683 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 24

Conread position: 73-393
Cow position: chr6:67323479-67323161 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 241, 164

Conread position: 75-444
Cow position: chr6:6098098-6098488 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 290

Conread position: 75-514
Cow position: chr6:14958172-14958619 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 157

Conread position: 83-311
Cow position: chr6:11830347-11830127 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 18

Conread position: 83-382
Cow position: chr6:16316476-16316165 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 272

Conread position: 85-314
Cow position: chr6:54185184-54185418 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 191

Conread position: 85-505
Cow position: chr6:42961205-42961633 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 88

Conread position: 86-385
Cow position: chr6:582116-582411 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 184, 80

Conread position: 86-407
Cow position: chr6:35993739-35993408 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 221, 10

Conread position: 86-426
Cow position: chr6:47799450-47799110 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 282

Conread position: 86-434
Cow position: chr6:16191828-16191471 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 147, 65

Conread position: 86-507
Cow position: chr6:9750900-9751313 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 229, 90

Conread position: 86-507
Cow position: chr6:47339199-47339624 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 173

Conread position: 86-507
Cow position: chr6:60057502-60057933 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 22

Conread position: 86-523
Cow position: chr6:40774175-40774627 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 312
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 44

Conread position: 87-506
Cow position: chr6:54867673-54867245 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 267

Conread position: 87-507
Cow position: chr6:35103172-35103592 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 233

Conread position: 87-507
Cow position: chr6:42565843-42565418 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 22

Conread position: 87-507
Cow position: chr6:63047748-63047308 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 293

Conread position: 88-312
Cow position: chr6:58608289-58608508 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 151

Conread position: 90-431
Cow position: chr6:53519471-53519816 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 168, 140

Conread position: 91-401
Cow position: chr6:26450465-26450154 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 81

Conread position: 91-440
Cow position: chr6:528132-528478 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 221, 137

Conread position: 91-459
Cow position: chr6:46865440-46865820 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 139

Conread position: 91-460
Cow position: chr6:45064865-45065228 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 179, 149

Conread position: 91-463
Cow position: chr6:66874501-66874137 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 27

Conread position: 91-466
Cow position: chr6:21736741-21737111 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 148, 27

Conread position: 91-505
Cow position: chr6:19681373-19681782 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 200

Conread position: 91-506
Cow position: chr6:24004688-24004280 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 289
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 220, 137

Conread position: 91-507
Cow position: chr6:67214901-67214474 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 154

Conread position: 92-367
Cow position: chr6:60667561-60667291 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 185, 40

Conread position: 93-313
Cow position: chr6:37463172-37462952 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 182

Conread position: 93-482
Cow position: chr6:8787887-8788279 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 146, 163

Conread position: 93-504
Cow position: chr6:14696215-14696637 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 154

Conread position: 93-507
Cow position: chr6:36470412-36470833 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 141

Conread position: 93-507
Cow position: chr6:57164575-57164159 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 25

Conread position: 97-332
Cow position: chr6:17548828-17549074 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 98-365
Cow position: chr6:7119474-7119736 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 206, 172

Conread position: 98-456
Cow position: chr6:16423846-16423481 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 133, 45

Conread position: 98-507
Cow position: chr6:66531677-66532070 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 142, 62

Conread position: 98-516
Cow position: chr6:60350147-60350574 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 386

Conread position: 101-420
Cow position: chr6:26909731-26910051 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 72

Conread position: 101-507
Cow position: chr6:4864405-4864806 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 88

Conread position: 101-507
Cow position: chr6:31526188-31525784 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 139

Conread position: 102-367
Cow position: chr6:20206416-20206150 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 168, 124

Conread position: 102-405
Cow position: chr6:47640291-47640604 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 140

Conread position: 102-459
Cow position: chr6:7189978-7190340 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 68

Conread position: 104-507
Cow position: chr6:63272473-63272885 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 34

Conread position: 106-462
Cow position: chr6:51893363-51893737 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 168, 123

Conread position: 112-533
Cow position: chr6:7989284-7989712 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 138

Conread position: 113-470
Cow position: chr6:63286375-63286742 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 232
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 157, 116

Conread position: 118-394
Cow position: chr6:55763978-55763698 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 154, 70

Conread position: 122-506
Cow position: chr6:53401477-53401104 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 21

Conread position: 127-459
Cow position: chr6:130047-130385 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 47

Conread position: 127-524
Cow position: chr6:457291-456895 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 43

Conread position: 129-506
Cow position: chr6:54140911-54140551 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 113

Conread position: 138-507
Cow position: chr6:56843259-56842892 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 95, 26

Conread position: 143-391
Cow position: chr6:61608612-61608354 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 143-507
Cow position: chr6:48170038-48169677 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 34, 30

Conread position: 145-409
Cow position: chr6:17333955-17334228 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 125, 101

Conread position: 145-436
Cow position: chr6:33277136-33276841 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 10

Conread position: 151-450
Cow position: chr6:57405033-57405336 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 126, 84

Conread position: 151-451
Cow position: chr6:24962237-24961932 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 140

Conread position: 151-459
Cow position: chr6:8804439-8804748 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 37

Conread position: 151-507
Cow position: chr6:44099178-44098820 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 19

Conread position: 174-499
Cow position: chr6:36928730-36928393 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 271

Conread position: 175-514
Cow position: chr6:18961447-18961797 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 267

Conread position: 176-460
Cow position: chr6:68049498-68049214 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 60

Conread position: 176-466
Cow position: chr6:38614886-38614596 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 169

Conread position: 187-524
Cow position: chr6:20230770-20231110 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 177

Conread position: 189-359
Cow position: chr6:44127665-44127486 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 189-400
Cow position: chr6:54492402-54492621 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 34

Conread position: 189-409
Cow position: chr6:9839226-9838991 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 185

Conread position: 189-436
Cow position: chr6:48187529-48187779 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 56

Conread position: 189-455
Cow position: chr6:25773331-25773598 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 83

Conread position: 189-459
Cow position: chr6:54884851-54885134 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 12

Conread position: 189-507
Cow position: chr6:58076284-58075960 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 179

Conread position: 189-514
Cow position: chr6:5957974-5958291 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 41

Conread position: 190-401
Cow position: chr6:59108998-59108779 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 38

Conread position: 190-437
Cow position: chr6:53731577-53731322 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 177

Conread position: 190-445
Cow position: chr6:61137428-61137158 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 51

Conread position: 190-506
Cow position: chr6:31635635-31635954 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 83

Conread position: 190-506
Cow position: chr6:58074103-58073776 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 52

Conread position: 190-507
Cow position: chr6:28148888-28148578 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 80, 38

Conread position: 190-507
Cow position: chr6:47540584-47540258 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 190-507
Cow position: chr6:62924945-62925261 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 40

Conread position: 191-361
Cow position: chr6:38234011-38233838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 155

Conread position: 191-394
Cow position: chr6:30688563-30688763 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 37

Conread position: 191-403
Cow position: chr6:40834416-40834638 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 191-422
Cow position: chr6:25008770-25008530 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 76

Conread position: 191-450
Cow position: chr6:52025598-52025866 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 177

Conread position: 191-507
Cow position: chr6:607313-606994 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 69

Conread position: 191-507
Cow position: chr6:34076081-34075759 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 200

Conread position: 192-402
Cow position: chr6:44984381-44984162 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 48

Conread position: 192-436
Cow position: chr6:63298980-63299221 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 124

Conread position: 193-401
Cow position: chr6:19351106-19351313 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 77, 20

Conread position: 193-410
Cow position: chr6:54288121-54287908 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 8

Conread position: 193-441
Cow position: chr6:48425274-48425524 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 61, 24

Conread position: 193-492
Cow position: chr6:32335851-32335567 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 193-505
Cow position: chr6:3978612-3978927 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 57

Conread position: 194-459
Cow position: chr6:49685634-49685364 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 170

Conread position: 196-454
Cow position: chr6:18968733-18968990 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 41

Conread position: 197-455
Cow position: chr6:48344379-48344111 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 45

Conread position: 197-488
Cow position: chr6:53711161-53710867 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 40

Conread position: 198-507
Cow position: chr6:16411236-16410928 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 30

Conread position: 200-449
Cow position: chr6:46400370-46400616 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 36

Conread position: 201-385
Cow position: chr6:603138-602949 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 149

Conread position: 204-383
Cow position: chr6:357847-358036 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 204-534
Cow position: chr6:16625982-16625655 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 31, 14

Conread position: 205-406
Cow position: chr6:58363970-58364180 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 163

Conread position: 211-501
Cow position: chr6:54294141-54293849 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 216-465
Cow position: chr6:22969111-22968847 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 218-460
Cow position: chr6:31564315-31564555 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 17

Conread position: 218-487
Cow position: chr6:16675825-16675574 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 252, 12

Conread position: 220-507
Cow position: chr6:59597667-59597389 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 131, 10

Conread position: 223-537
Cow position: chr6:12500875-12500559 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 13

Conread position: 225-457
Cow position: chr6:5462040-5462267 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 46

Conread position: 225-458
Cow position: chr6:21110985-21110749 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 20, 119

Conread position: 225-506
Cow position: chr6:66303823-66304107 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 46, 145

Conread position: 226-500
Cow position: chr6:6722122-6721859 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 124

Conread position: 227-460
Cow position: chr6:48572866-48573104 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 97

Conread position: 228-474
Cow position: chr6:59301805-59302063 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 86, 0

Conread position: 229-453
Cow position: chr6:66453815-66453586 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 229-459
Cow position: chr6:30786140-30786369 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 41, 140

Conread position: 231-500
Cow position: chr6:57411646-57411385 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 154

Conread position: 241-510
Cow position: chr6:642562-642848 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 17

Conread position: 245-506
Cow position: chr6:28477177-28476911 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 120

Conread position: 259-507
Cow position: chr6:1783792-1784033 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 70

Conread position: 260-422
Cow position: chr6:1703802-1703630 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 260-434
Cow position: chr6:33917868-33918047 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 265-510
Cow position: chr6:19508461-19508702 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 55

Conread position: 269-524
Cow position: chr6:46667086-46666821 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 186

Conread position: 275-439
Cow position: chr6:46245350-46245524 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 5

Conread position: 281-481
Cow position: chr6:28559386-28559173 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 163

Show alignments to all cow chromosomes.