Cow genome map
| Conread name: | recc2804c_n16.y1 |
| Conread position: | 71-237 |
| Cow position: | chr17:9748996-9748821 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 73-237 |
| Cow position: | chr17:26614489-26614654 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 74-234 |
| Cow position: | chr17:27505340-27505177 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 78-211 |
| Cow position: | chr17:31465001-31465135 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 78-237 |
| Cow position: | chr17:8615609-8615763 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 95 |
| Conread position: | 78-237 |
| Cow position: | chr17:8831905-8832065 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 101 |
| Conread position: | 78-237 |
| Cow position: | chr17:32457330-32457491 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 78-243 |
| Cow position: | chr17:7861464-7861630 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 99 |
| Conread position: | 81-237 |
| Cow position: | chr17:2271231-2271078 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 81-237 |
| Cow position: | chr17:8094075-8093925 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 82-214 |
| Cow position: | chr17:6559090-6558955 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 83-237 |
| Cow position: | chr17:19891851-19891702 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 84-235 |
| Cow position: | chr17:18173599-18173748 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 84-236 |
| Cow position: | chr17:3619855-3620007 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 84-237 |
| Cow position: | chr17:30236420-30236274 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 81, 11 |
| Conread position: | 86-239 |
| Cow position: | chr17:4085980-4085830 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 87-218 |
| Cow position: | chr17:37342060-37342195 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 87-236 |
| Cow position: | chr17:8215419-8215271 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 87-237 |
| Cow position: | chr17:33903696-33903844 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 89-237 |
| Cow position: | chr17:38139735-38139587 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 91-234 |
| Cow position: | chr17:13229604-13229459 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 91-237 |
| Cow position: | chr17:39012940-39012797 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 36 |
| Conread position: | 92-237 |
| Cow position: | chr17:143956-144101 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 95-237 |
| Cow position: | chr17:15923058-15922916 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 98-235 |
| Cow position: | chr17:3467185-3467046 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 99-232 |
| Cow position: | chr17:10271700-10271574 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 99-237 |
| Cow position: | chr17:42775051-42775190 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 100-235 |
| Cow position: | chr17:21730082-21730218 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 108-237 |
| Cow position: | chr17:27781273-27781144 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 108-237 |
| Cow position: | chr17:37043215-37043337 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 112-235 |
| Cow position: | chr17:33930363-33930239 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 117-237 |
| Cow position: | chr17:11826258-11826379 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 120-243 |
| Cow position: | chr17:23318127-23318246 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 126-237 |
| Cow position: | chr17:7595338-7595228 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 51 |
Show alignments to all cow chromosomes.