Cow genome map
| Conread name: | recc2804c_n16.y1 |
| Conread position: | 72-234 |
| Cow position: | chr6:15996979-15997137 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 75-237 |
| Cow position: | chr6:827468-827630 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 7 |
| Conread position: | 75-237 |
| Cow position: | chr6:36194835-36194676 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 77-232 |
| Cow position: | chr6:52002591-52002438 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 78-237 |
| Cow position: | chr6:35774746-35774906 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 78-237 |
| Cow position: | chr6:38914678-38914518 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 78-237 |
| Cow position: | chr6:47192288-47192447 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 78-239 |
| Cow position: | chr6:9026751-9026595 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 82-237 |
| Cow position: | chr6:30160549-30160396 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 82-237 |
| Cow position: | chr6:47624652-47624804 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 82-246 |
| Cow position: | chr6:60423109-60423272 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 84-235 |
| Cow position: | chr6:17534288-17534434 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 84-237 |
| Cow position: | chr6:54144533-54144380 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 84-237 |
| Cow position: | chr6:59496444-59496297 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 86-236 |
| Cow position: | chr6:4023331-4023180 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 86-237 |
| Cow position: | chr6:15943771-15943924 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 87-237 |
| Cow position: | chr6:24650071-24649922 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 88-223 |
| Cow position: | chr6:50287549-50287685 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 88-235 |
| Cow position: | chr6:28165052-28164904 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 88 |
| Conread position: | 89-235 |
| Cow position: | chr6:50034508-50034647 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 95-231 |
| Cow position: | chr6:65872105-65871973 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 95-235 |
| Cow position: | chr6:19427666-19427530 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 33 |
| Conread position: | 95-235 |
| Cow position: | chr6:41042137-41041999 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 95-235 |
| Cow position: | chr6:43760574-43760441 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 95-235 |
| Cow position: | chr6:53674081-53673943 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 95-235 |
| Cow position: | chr6:56376132-56376269 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 95-237 |
| Cow position: | chr6:13718985-13718841 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 95-237 |
| Cow position: | chr6:15782294-15782437 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 95-239 |
| Cow position: | chr6:33985443-33985301 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 95-239 |
| Cow position: | chr6:37054204-37054061 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 96-237 |
| Cow position: | chr6:36892114-36892253 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 99-223 |
| Cow position: | chr6:38453565-38453690 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 99-229 |
| Cow position: | chr6:31425343-31425473 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 99-235 |
| Cow position: | chr6:37612322-37612185 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 99-237 |
| Cow position: | chr6:53264585-53264720 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 101-229 |
| Cow position: | chr6:24558092-24557964 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 103-225 |
| Cow position: | chr6:5085499-5085620 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 107-234 |
| Cow position: | chr6:15754049-15753924 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 108-239 |
| Cow position: | chr6:10237541-10237409 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 111-235 |
| Cow position: | chr6:1890373-1890502 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.