Cow genome map
| Conread name: | recc2804c_n16.y1 |
| Conread position: | 61-238 |
| Cow position: | chr8:5997546-5997722 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 66-230 |
| Cow position: | chr8:46203484-46203321 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 75-210 |
| Cow position: | chr8:34054962-34055100 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 75-237 |
| Cow position: | chr8:943024-942858 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 75-237 |
| Cow position: | chr8:48763754-48763596 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 77-235 |
| Cow position: | chr8:24934324-24934170 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 78-235 |
| Cow position: | chr8:15861724-15861874 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 78-237 |
| Cow position: | chr8:36471750-36471589 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 80-237 |
| Cow position: | chr8:49265096-49265254 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 81-232 |
| Cow position: | chr8:31814838-31814992 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 64 |
| Conread position: | 81-235 |
| Cow position: | chr8:45987595-45987748 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 81-237 |
| Cow position: | chr8:9812006-9811849 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 81-237 |
| Cow position: | chr8:26451329-26451171 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 82-237 |
| Cow position: | chr8:13900608-13900446 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 83-237 |
| Cow position: | chr8:18175801-18175956 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 84-225 |
| Cow position: | chr8:56033671-56033811 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 84-237 |
| Cow position: | chr8:7671541-7671392 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 44, 93 |
| Conread position: | 84-237 |
| Cow position: | chr8:20682601-20682442 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 85-237 |
| Cow position: | chr8:25573246-25573087 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 85-237 |
| Cow position: | chr8:51959206-51959360 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 86-235 |
| Cow position: | chr8:49577128-49576981 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 86-237 |
| Cow position: | chr8:23030830-23030680 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 86-237 |
| Cow position: | chr8:33218752-33218906 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 86-239 |
| Cow position: | chr8:25075793-25075640 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 93 |
| Conread position: | 86-263 |
| Cow position: | chr8:59506879-59507056 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 87-198 |
| Cow position: | chr8:5675192-5675304 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 88-237 |
| Cow position: | chr8:24547216-24547064 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 88-237 |
| Cow position: | chr8:32079484-32079634 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 92-235 |
| Cow position: | chr8:57421091-57420947 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 95-235 |
| Cow position: | chr8:46640146-46640286 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 95-235 |
| Cow position: | chr8:53866292-53866150 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 95-236 |
| Cow position: | chr8:37114722-37114861 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 66, 79 |
| Conread position: | 95-237 |
| Cow position: | chr8:28221377-28221518 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 80 |
| Conread position: | 95-237 |
| Cow position: | chr8:35218557-35218414 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 97-237 |
| Cow position: | chr8:18743682-18743544 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 97-239 |
| Cow position: | chr8:27053416-27053554 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 97-240 |
| Cow position: | chr8:13810391-13810250 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 99-237 |
| Cow position: | chr8:1839934-1840067 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 99-237 |
| Cow position: | chr8:19171432-19171565 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 99-237 |
| Cow position: | chr8:37487110-37487249 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 99-237 |
| Cow position: | chr8:43803739-43803598 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 101-237 |
| Cow position: | chr8:41318221-41318084 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 101-238 |
| Cow position: | chr8:11249298-11249433 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 103-237 |
| Cow position: | chr8:18001084-18001215 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 103-237 |
| Cow position: | chr8:36505558-36505424 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 104-237 |
| Cow position: | chr8:34317890-34318026 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 105-237 |
| Cow position: | chr8:20052738-20052872 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 106-236 |
| Cow position: | chr8:13976070-13975940 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 107-235 |
| Cow position: | chr8:39936800-39936672 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 107-237 |
| Cow position: | chr8:26922800-26922672 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 107-237 |
| Cow position: | chr8:43693387-43693257 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 120-240 |
| Cow position: | chr8:45586259-45586377 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 55 |
Show alignments to all cow chromosomes.