Cow genome map
| Conread name: | recc2804c_n16.y1 |
| Conread position: | 56-237 |
| Cow position: | chr9:6346804-6346986 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 71-237 |
| Cow position: | chr9:27292451-27292287 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 77-237 |
| Cow position: | chr9:35708790-35708627 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 99 |
| Conread position: | 78-237 |
| Cow position: | chr9:58669213-58669373 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 81-237 |
| Cow position: | chr9:42037489-42037644 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 82-237 |
| Cow position: | chr9:18111025-18110874 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 82-237 |
| Cow position: | chr9:19382165-19382322 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 82-237 |
| Cow position: | chr9:40007698-40007853 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 83-236 |
| Cow position: | chr9:21537104-21537258 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 84-237 |
| Cow position: | chr9:39152843-39152688 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 85-237 |
| Cow position: | chr9:6203947-6203795 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 85-237 |
| Cow position: | chr9:20839466-20839620 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 85-237 |
| Cow position: | chr9:30019820-30019971 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 90 |
| Conread position: | 85-237 |
| Cow position: | chr9:32266547-32266396 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 86-237 |
| Cow position: | chr9:10676534-10676383 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 86-237 |
| Cow position: | chr9:21463016-21462874 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 49 |
| Conread position: | 86-237 |
| Cow position: | chr9:36827538-36827690 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 86-237 |
| Cow position: | chr9:43697303-43697160 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 87-212 |
| Cow position: | chr9:43944653-43944526 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 90-237 |
| Cow position: | chr9:26645764-26645912 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 90-237 |
| Cow position: | chr9:33999301-33999154 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 92-235 |
| Cow position: | chr9:34309874-34310018 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 92-237 |
| Cow position: | chr9:17110619-17110765 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 95-229 |
| Cow position: | chr9:21566762-21566627 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 95-234 |
| Cow position: | chr9:5172182-5172320 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 95-234 |
| Cow position: | chr9:39428951-39428811 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 95-235 |
| Cow position: | chr9:50522487-50522354 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 95-236 |
| Cow position: | chr9:8657582-8657440 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 95-237 |
| Cow position: | chr9:3169669-3169531 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 95-237 |
| Cow position: | chr9:15006898-15006758 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 95-239 |
| Cow position: | chr9:43926256-43926116 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 95-242 |
| Cow position: | chr9:42173336-42173189 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 99-235 |
| Cow position: | chr9:46252676-46252811 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 99-237 |
| Cow position: | chr9:20039276-20039139 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 99-237 |
| Cow position: | chr9:33059419-33059280 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 101-237 |
| Cow position: | chr9:34203984-34204121 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 101-237 |
| Cow position: | chr9:53794673-53794537 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 103-237 |
| Cow position: | chr9:15033766-15033898 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 106-234 |
| Cow position: | chr9:34725648-34725525 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 108-237 |
| Cow position: | chr9:32847751-32847881 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 111-231 |
| Cow position: | chr9:48773218-48773335 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 116-237 |
| Cow position: | chr9:64008009-64007890 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 125-237 |
| Cow position: | chr9:11102919-11102808 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 48 |
Show alignments to all cow chromosomes.