Cow genome map
| Conread name: | recc2804c_n16.y1 |
| Conread position: | 78-229 |
| Cow position: | chrX:15305072-15305223 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 78-237 |
| Cow position: | chrX:630086-630245 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 78-237 |
| Cow position: | chrX:27771354-27771512 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 82-233 |
| Cow position: | chrX:5046693-5046848 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 82-233 |
| Cow position: | chrX:30069505-30069354 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 65 |
| Conread position: | 82-237 |
| Cow position: | chrX:27287519-27287672 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 83-237 |
| Cow position: | chrX:29874152-29874306 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 83-237 |
| Cow position: | chrX:34470931-34470778 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 83-237 |
| Cow position: | chrX:36841081-36840927 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 83-240 |
| Cow position: | chrX:29675719-29675560 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 84-237 |
| Cow position: | chrX:4545136-4545288 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 84-237 |
| Cow position: | chrX:6563736-6563584 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 91 |
| Conread position: | 84-237 |
| Cow position: | chrX:41084135-41083979 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 85-234 |
| Cow position: | chrX:26618900-26619050 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 85-237 |
| Cow position: | chrX:46084190-46084037 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 86-234 |
| Cow position: | chrX:39000065-38999916 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 52, 91 |
| Conread position: | 86-235 |
| Cow position: | chrX:40789421-40789274 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 87-223 |
| Cow position: | chrX:34355760-34355896 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 87-235 |
| Cow position: | chrX:31602873-31602724 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 88-231 |
| Cow position: | chrX:33585703-33585562 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 88-237 |
| Cow position: | chrX:16514059-16514202 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 89-235 |
| Cow position: | chrX:46028548-46028695 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 90-237 |
| Cow position: | chrX:21640636-21640490 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 92-237 |
| Cow position: | chrX:23414165-23414304 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 95-220 |
| Cow position: | chrX:20344115-20344234 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 95-235 |
| Cow position: | chrX:10302545-10302408 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 95-235 |
| Cow position: | chrX:18456608-18456468 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 95-237 |
| Cow position: | chrX:7425673-7425530 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 95-237 |
| Cow position: | chrX:10289419-10289562 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 95-237 |
| Cow position: | chrX:17895728-17895865 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 95-237 |
| Cow position: | chrX:18142252-18142389 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 95-237 |
| Cow position: | chrX:18286875-18287012 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 95-237 |
| Cow position: | chrX:21664517-21664656 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 95-237 |
| Cow position: | chrX:25338392-25338252 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 95-237 |
| Cow position: | chrX:31273410-31273267 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 95-239 |
| Cow position: | chrX:9839429-9839287 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 97-237 |
| Cow position: | chrX:18417099-18417240 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 99-235 |
| Cow position: | chrX:488879-488745 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 99-237 |
| Cow position: | chrX:33802804-33802943 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 104-237 |
| Cow position: | chrX:23179083-23179215 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 110-237 |
| Cow position: | chrX:27176120-27176248 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 122-239 |
| Cow position: | chrX:2301102-2300987 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 125-240 |
| Cow position: | chrX:3951216-3951102 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 128-240 |
| Cow position: | chrX:16419319-16419208 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.