Cow genome map
| Conread name: | recc2818c_g16.y1 |
| Conread position: | 1-506 |
| Cow position: | chr17:22473457-22473963 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 1-555 |
| Cow position: | chr17:22589727-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-663 |
| Cow position: | chr17:22552645-22551983 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 1-667 |
| Cow position: | chr17:22552225-22551559 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 600, 581 |
| Conread position: | 1-667 |
| Cow position: | chr17:22552309-22551643 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 1-667 |
| Cow position: | chr17:22553065-22552399 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 506, 517 |
| Conread position: | 8-410 |
| Cow position: | chr17:22551882-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 236 |
| Conread position: | 8-667 |
| Cow position: | chr17:22552890-22552231 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 423 |
| Conread position: | 9-637 |
| Cow position: | chr17:22589803-22589175 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 434, 416 |
| Conread position: | 9-646 |
| Cow position: | chr17:22552133-22551496 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 498, 509 |
| Conread position: | 9-652 |
| Cow position: | chr17:22552553-22551910 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 501, 509 |
| Conread position: | 9-653 |
| Cow position: | chr17:22590139-22589495 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-667 |
| Cow position: | chr17:22552385-22551727 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 498, 509 |
| Conread position: | 9-667 |
| Cow position: | chr17:22552805-22552147 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 518, 522 |
| Conread position: | 9-667 |
| Cow position: | chr17:22552973-22552315 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 501, 515 |
| Conread position: | 9-667 |
| Cow position: | chr17:22553141-22552483 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 345 |
| Conread position: | 9-667 |
| Cow position: | chr17:22589887-22589229 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 521, 517 |
| Conread position: | 9-667 |
| Cow position: | chr17:22590223-22589565 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 160 |
| Conread position: | 10-667 |
| Cow position: | chr17:22590306-22589649 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-422 |
| Cow position: | chr17:22452080-22451669 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 100 |
| Conread position: | 12-563 |
| Cow position: | chr17:22499093-22498542 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 91 |
| Conread position: | 12-663 |
| Cow position: | chr17:22590052-22589401 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-666 |
| Cow position: | chr17:22452331-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 419, 428 |
| Conread position: | 13-502 |
| Cow position: | chr17:22452162-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 162 |
| Conread position: | 15-664 |
| Cow position: | chr17:22452412-22451763 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 157 |
| Conread position: | 23-328 |
| Cow position: | chr17:22451900-22451595 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-656 |
| Cow position: | chr17:22499166-22498533 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 240 |
| Conread position: | 25-663 |
| Cow position: | chr17:22499332-22498694 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 403 |
| Conread position: | 26-579 |
| Cow position: | chr17:22473398-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 400 |
| Conread position: | 26-661 |
| Cow position: | chr17:22499247-22498612 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 318 |
| Conread position: | 26-667 |
| Cow position: | chr17:22473233-22473871 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 27-585 |
| Cow position: | chr17:22452232-22451674 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 319 |
| Conread position: | 27-667 |
| Cow position: | chr17:22552451-22551811 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 319 |
| Conread position: | 27-667 |
| Cow position: | chr17:22552703-22552063 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 328 |
| Conread position: | 31-663 |
| Cow position: | chr17:22473319-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 34-667 |
| Cow position: | chr17:22499409-22498774 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 395 |
| Conread position: | 102-667 |
| Cow position: | chr17:22452409-22451844 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 106-667 |
| Cow position: | chr17:22473229-22473787 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 35 |
| Conread position: | 137-661 |
| Cow position: | chr17:22499388-22498864 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 445 |
| Conread position: | 184-667 |
| Cow position: | chr17:22452411-22451928 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 81 |
| Conread position: | 228-666 |
| Cow position: | chr17:22553174-22552736 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 290 |
| Conread position: | 437-662 |
| Cow position: | chr17:22499422-22499199 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.