Cow genome map
| Conread name: | recc2818c_g16.y1 |
| Conread position: | 1-303 |
| Cow position: | chr19:23614816-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 1-333 |
| Cow position: | chr19:43570016-43569688 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 1-629 |
| Cow position: | chr19:23614480-23615108 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 606, 602 |
| Conread position: | 1-639 |
| Cow position: | chr19:14959933-14959311 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 93 |
| Conread position: | 1-667 |
| Cow position: | chr19:23614312-23614978 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 621 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-667 |
| Cow position: | chr19:23613977-23614642 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 3-667 |
| Cow position: | chr19:23613895-23614558 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 10 |
| Conread position: | 4-667 |
| Cow position: | chr19:23613812-23614474 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 438, 8 |
| Conread position: | 9-400 |
| Cow position: | chr19:14940624-14941015 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 103 |
| Conread position: | 9-435 |
| Cow position: | chr19:14948418-14947992 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 14 |
| Conread position: | 9-666 |
| Cow position: | chr19:23613732-23614389 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 254 |
| Conread position: | 9-667 |
| Cow position: | chr19:14940036-14940694 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 102 |
| Conread position: | 9-667 |
| Cow position: | chr19:14940288-14940946 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 9-667 |
| Cow position: | chr19:14960427-14959773 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 11-423 |
| Cow position: | chr19:20678337-20678746 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 269, 257 |
| Conread position: | 11-555 |
| Cow position: | chr19:23614574-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 78 |
| Conread position: | 12-286 |
| Cow position: | chr19:14940795-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 268, 258 |
| Conread position: | 12-523 |
| Cow position: | chr19:43570173-43569666 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 165 |
| Conread position: | 12-563 |
| Cow position: | chr19:20635496-20634950 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 5 |
| Conread position: | 12-563 |
| Cow position: | chr19:20678254-20678802 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 12-659 |
| Cow position: | chr19:14960340-14959700 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 12-661 |
| Cow position: | chr19:14940375-14941024 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 12-667 |
| Cow position: | chr19:14959602-14958962 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 12-667 |
| Cow position: | chr19:20677666-20678321 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 98 |
| Conread position: | 12-667 |
| Cow position: | chr19:20677836-20678489 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 423, 5 |
| Conread position: | 12-667 |
| Cow position: | chr19:23614155-23614810 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 12-667 |
| Cow position: | chr19:23649437-23650092 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 162 |
| Conread position: | 13-502 |
| Cow position: | chr19:23649943-23650432 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 10 |
| Conread position: | 13-667 |
| Cow position: | chr19:23614072-23614726 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 593, 570 |
| Conread position: | 15-340 |
| Cow position: | chr19:23650112-23650437 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-667 |
| Cow position: | chr19:23613571-23614222 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 423, 9 |
| Conread position: | 15-667 |
| Cow position: | chr19:23649608-23650260 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 495, 506 |
| Conread position: | 16-667 |
| Cow position: | chr19:14939960-14940610 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 14 |
| Conread position: | 17-667 |
| Cow position: | chr19:23614413-23615062 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 7 |
| Conread position: | 18-667 |
| Cow position: | chr19:23597005-23597651 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 28 |
| Conread position: | 21-584 |
| Cow position: | chr19:14915858-14916413 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 21-655 |
| Cow position: | chr19:43570322-43569700 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 44 |
| Conread position: | 21-667 |
| Cow position: | chr19:20677927-20678573 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 71 |
| Conread position: | 22-446 |
| Cow position: | chr19:14916024-14916443 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 276, 105 |
| Conread position: | 24-667 |
| Cow position: | chr19:23649281-23649924 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 330 |
| Conread position: | 26-405 |
| Cow position: | chr19:23597346-23597725 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 307, 314 |
| Conread position: | 26-482 |
| Cow position: | chr19:23597262-23597718 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 67 |
| Conread position: | 26-634 |
| Cow position: | chr19:23649871-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 124 |
| Conread position: | 26-667 |
| Cow position: | chr19:14959670-14959046 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 26-667 |
| Cow position: | chr19:20677596-20678237 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 26-667 |
| Cow position: | chr19:20678100-20678738 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 79 |
| Conread position: | 26-667 |
| Cow position: | chr19:23613413-23614054 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 581, 567 |
| Conread position: | 26-667 |
| Cow position: | chr19:23613497-23614138 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 156 |
| Conread position: | 27-523 |
| Cow position: | chr19:14940558-14941054 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 27-585 |
| Cow position: | chr19:43570242-43569688 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 66 |
| Conread position: | 27-638 |
| Cow position: | chr19:14959419-14958823 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 379 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 499, 114 |
| Conread position: | 27-645 |
| Cow position: | chr19:23597095-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 27-647 |
| Cow position: | chr19:23649788-23650408 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 160 |
| Conread position: | 27-661 |
| Cow position: | chr19:14940222-14940856 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 319 |
| Conread position: | 27-661 |
| Cow position: | chr19:23649704-23650338 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 141 |
| Conread position: | 27-665 |
| Cow position: | chr19:23613666-23614304 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 85 |
| Conread position: | 27-667 |
| Cow position: | chr19:14940138-14940778 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 404 |
| Conread position: | 27-667 |
| Cow position: | chr19:20677513-20678153 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 28-647 |
| Cow position: | chr19:43570398-43569790 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 5 |
| Conread position: | 32-652 |
| Cow position: | chr19:20635646-20635026 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 71 |
| Conread position: | 38-667 |
| Cow position: | chr19:20677440-20678069 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 403 |
| Conread position: | 39-574 |
| Cow position: | chr19:20635555-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 391 |
| Conread position: | 47-667 |
| Cow position: | chr19:23613350-23613970 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 115-585 |
| Cow position: | chr19:14948480-14948011 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 80 |
| Conread position: | 119-667 |
| Cow position: | chr19:43570392-43569854 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 125-667 |
| Cow position: | chr19:20677359-20677901 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 301 |
| Conread position: | 151-667 |
| Cow position: | chr19:43570606-43570106 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 331 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 152-558 |
| Cow position: | chr19:14959712-14959308 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 183, 61 |
| Conread position: | 156-664 |
| Cow position: | chr19:14960448-14959942 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 275 |
| Conread position: | 180-667 |
| Cow position: | chr19:20635750-20635263 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 180-667 |
| Cow position: | chr19:23613315-23613802 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 166 |
| Conread position: | 183-667 |
| Cow position: | chr19:23596833-23597315 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 205-667 |
| Cow position: | chr19:20635641-20635179 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 141 |
| Conread position: | 213-667 |
| Cow position: | chr19:14960475-14960023 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 279-667 |
| Cow position: | chr19:14948484-14948097 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.