Cow genome map

Conread name: recc2818c_g16.y1

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 25

Conread position: 1-305
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-515
Cow position:
Alignm length: 519
Alignm identity: 319
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 7

Conread position: 1-556
Cow position:
Alignm length: 558
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 15

Conread position: 7-667
Cow position:
Alignm length: 667
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 171

Conread position: 8-354
Cow position:
Alignm length: 349
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 79

Conread position: 9-472
Cow position:
Alignm length: 465
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 166

Conread position: 9-585
Cow position:
Alignm length: 582
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 101

Conread position: 10-504
Cow position:
Alignm length: 497
Alignm identity: 297
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 201

Conread position: 12-370
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 87, 81

Conread position: 12-389
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-427
Cow position:
Alignm length: 418
Alignm identity: 268
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 108, 83

Conread position: 12-665
Cow position:
Alignm length: 673
Alignm identity: 414
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 169, 163

Conread position: 12-667
Cow position:
Alignm length: 662
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 40

Conread position: 13-427
Cow position:
Alignm length: 417
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 20

Conread position: 17-667
Cow position:
Alignm length: 653
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 588, 6

Conread position: 22-585
Cow position:
Alignm length: 568
Alignm identity: 339
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 66

Conread position: 22-667
Cow position:
Alignm length: 649
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 74

Conread position: 25-628
Cow position:
Alignm length: 620
Alignm identity: 378
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 149, 340

Conread position: 26-323
Cow position:
Alignm length: 298
Alignm identity: 202
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 267, 0

Conread position: 26-409
Cow position:
Alignm length: 386
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 67

Conread position: 26-460
Cow position:
Alignm length: 439
Alignm identity: 270
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 79

Conread position: 26-485
Cow position:
Alignm length: 460
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-508
Cow position:
Alignm length: 483
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 26-628
Cow position:
Alignm length: 606
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 67

Conread position: 26-637
Cow position:
Alignm length: 613
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 575, 149

Conread position: 27-286
Cow position:
Alignm length: 261
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 253, 247

Conread position: 27-338
Cow position:
Alignm length: 312
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 27-403
Cow position:
Alignm length: 378
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 62

Conread position: 27-473
Cow position:
Alignm length: 450
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 146

Conread position: 27-558
Cow position:
Alignm length: 536
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 152

Conread position: 27-641
Cow position:
Alignm length: 618
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 532, 547

Conread position: 27-658
Cow position:
Alignm length: 635
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 151

Conread position: 27-665
Cow position:
Alignm length: 641
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 240

Conread position: 27-667
Cow position:
Alignm length: 643
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 66

Conread position: 28-667
Cow position:
Alignm length: 642
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 230

Conread position: 29-667
Cow position:
Alignm length: 641
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 32-524
Cow position:
Alignm length: 495
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 224

Conread position: 32-667
Cow position:
Alignm length: 636
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 42-485
Cow position:
Alignm length: 444
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 0

Conread position: 42-633
Cow position:
Alignm length: 594
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 227

Conread position: 46-639
Cow position:
Alignm length: 596
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 220

Conread position: 57-393
Cow position:
Alignm length: 339
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 124, 116

Conread position: 109-557
Cow position:
Alignm length: 449
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 109-667
Cow position:
Alignm length: 564
Alignm identity: 343
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 232, 237

Conread position: 110-637
Cow position:
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 111-664
Cow position:
Alignm length: 559
Alignm identity: 346
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 67

Conread position: 111-667
Cow position:
Alignm length: 559
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 117-664
Cow position:
Alignm length: 550
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 126-575
Cow position:
Alignm length: 451
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 226

Conread position: 133-658
Cow position:
Alignm length: 528
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 457

Conread position: 134-661
Cow position:
Alignm length: 531
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 38

Conread position: 134-667
Cow position:
Alignm length: 534
Alignm identity: 327
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 140-508
Cow position:
Alignm length: 371
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 0

Conread position: 141-667
Cow position:
Alignm length: 528
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 204

Conread position: 142-524
Cow position:
Alignm length: 385
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 30

Conread position: 142-667
Cow position:
Alignm length: 529
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 103

Conread position: 181-659
Cow position:
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 186-637
Cow position:
Alignm length: 459
Alignm identity: 293
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 66, 76

Conread position: 214-667
Cow position:
Alignm length: 454
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 215-667
Cow position:
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 217-667
Cow position:
Alignm length: 452
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 162, 90

Conread position: 225-637
Cow position:
Alignm length: 414
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 367

Conread position: 235-628
Cow position:
Alignm length: 397
Alignm identity: 251
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 10

Conread position: 288-667
Cow position:
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 57

Conread position: 294-664
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 294-667
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 228, 209

Conread position: 308-646
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 127, 121

Conread position: 379-667
Cow position:
Alignm length: 292
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 48

Conread position: 392-666
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 403-667
Cow position:
Alignm length: 267
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 11

Conread position: 476-667
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.