Cow genome map
| Conread name: | recc2818c_g16.y1 |
| Conread position: | 1-636 |
| Cow position: | chr24:17070412-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 173 |
| Conread position: | 8-667 |
| Cow position: | chr24:17035746-17035087 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-652 |
| Cow position: | chr24:17035997-17035354 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 426, 419 |
| Conread position: | 11-477 |
| Cow position: | chr24:17070590-17071056 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-351 |
| Cow position: | chr24:17013212-17013551 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 91, 83 |
| Conread position: | 12-646 |
| Cow position: | chr24:17036414-17035780 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-652 |
| Cow position: | chr24:17036246-17035606 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 334 |
| Conread position: | 12-661 |
| Cow position: | chr24:17035658-17035009 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 12-666 |
| Cow position: | chr24:17036078-17035424 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 161 |
| Conread position: | 16-486 |
| Cow position: | chr24:17035402-17034933 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 455, 0 |
| Conread position: | 19-667 |
| Cow position: | chr24:17078290-17077642 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 429 |
| Conread position: | 25-667 |
| Cow position: | chr24:17036317-17035675 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 125 |
| Conread position: | 26-549 |
| Cow position: | chr24:17078031-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 149 |
| Conread position: | 26-561 |
| Cow position: | chr24:17070521-17071056 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-653 |
| Cow position: | chr24:17036148-17035521 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 402 |
| Conread position: | 26-654 |
| Cow position: | chr24:17035560-17034933 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 141 |
| Conread position: | 27-395 |
| Cow position: | chr24:17070690-17071058 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-638 |
| Cow position: | chr24:17078114-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 421 |
| Conread position: | 27-667 |
| Cow position: | chr24:17035895-17035255 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 148 |
| Conread position: | 27-667 |
| Cow position: | chr24:17036483-17035843 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 238 |
| Conread position: | 31-401 |
| Cow position: | chr24:17013147-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 360, 0 |
| Conread position: | 42-667 |
| Cow position: | chr24:17036551-17035927 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 6 |
| Conread position: | 72-667 |
| Cow position: | chr24:17078153-17077558 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 101 |
| Conread position: | 85-358 |
| Cow position: | chr24:16986384-16986656 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 111-667 |
| Cow position: | chr24:17070438-17070994 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 177-667 |
| Cow position: | chr24:17070420-17070910 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-429 |
| Cow position: | chr24:16986425-16986643 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 125, 119 |
| Conread position: | 215-558 |
| Cow position: | chr24:17013165-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 215, 15 |
| Conread position: | 295-525 |
| Cow position: | chr24:16986425-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 298-637 |
| Cow position: | chr24:17013162-17013501 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 141, 128 |
| Conread position: | 312-667 |
| Cow position: | chr24:17036615-17036263 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 313-666 |
| Cow position: | chr24:17070388-17070741 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 385-585 |
| Cow position: | chr24:16986431-16986631 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-667 |
| Cow position: | chr24:16986406-16986629 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 164, 7 |
| Conread position: | 447-667 |
| Cow position: | chr24:17013227-17013447 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 146, 154 |
| Conread position: | 466-667 |
| Cow position: | chr24:17013162-17013363 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.