Cow genome map
| Conread name: | recc2818c_g16.y1 |
| Conread position: | 1-584 |
| Cow position: | chr3:62742899-62743460 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 94 |
| Conread position: | 6-667 |
| Cow position: | chr3:77351281-77350632 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 9-663 |
| Cow position: | chr3:62722364-62721712 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 9-667 |
| Cow position: | chr3:68045562-68046220 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 165 |
| Conread position: | 10-667 |
| Cow position: | chr3:62722279-62721622 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 165 |
| Conread position: | 13-638 |
| Cow position: | chr3:62722192-62721567 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 162 |
| Conread position: | 14-350 |
| Cow position: | chr3:68045987-68046323 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-667 |
| Cow position: | chr3:68027059-68027711 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 256 |
| Conread position: | 16-321 |
| Cow position: | chr3:68027480-68027784 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 272, 259 |
| Conread position: | 21-559 |
| Cow position: | chr3:68027233-68027769 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 246 |
| Conread position: | 26-427 |
| Cow position: | chr3:62743075-62743471 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 42 |
| Conread position: | 26-473 |
| Cow position: | chr3:62722011-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-585 |
| Cow position: | chr3:68027154-68027713 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 141 |
| Conread position: | 26-628 |
| Cow position: | chr3:68045747-68046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 141 |
| Conread position: | 26-665 |
| Cow position: | chr3:62742257-62742891 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 26-667 |
| Cow position: | chr3:62742592-62743207 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 49 |
| Conread position: | 26-667 |
| Cow position: | chr3:62742839-62743459 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 27-555 |
| Cow position: | chr3:77351094-77350576 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 57 |
| Conread position: | 27-637 |
| Cow position: | chr3:77351177-77350578 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 29-667 |
| Cow position: | chr3:68026990-68027627 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 111-508 |
| Cow position: | chr3:62743076-62743468 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 39 |
| Conread position: | 111-667 |
| Cow position: | chr3:62722346-62721790 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 6 |
| Conread position: | 133-667 |
| Cow position: | chr3:68045602-68046136 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 158-653 |
| Cow position: | chr3:68026950-68027445 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 110 |
| Conread position: | 180-665 |
| Cow position: | chr3:62742242-62742724 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 185-667 |
| Cow position: | chr3:68026814-68027291 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 206-470 |
| Cow position: | chr3:16020466-16020209 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 363-667 |
| Cow position: | chr3:62742258-62742561 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 375-638 |
| Cow position: | chr3:16020465-16020209 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 225, 58 |
| Conread position: | 445-667 |
| Cow position: | chr3:62722348-62722126 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 35, 19 |
Show alignments to all cow chromosomes.