Cow genome map

Conread name: recc2818c_g16.y1

Conread position: 1-463
Cow position:
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 344

Conread position: 1-584
Cow position:
Alignm length: 589
Alignm identity: 350
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 153, 77

Conread position: 1-630
Cow position:
Alignm length: 633
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 88

Conread position: 1-666
Cow position:
Alignm length: 669
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 98

Conread position: 1-667
Cow position:
Alignm length: 668
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 603, 611

Conread position: 1-667
Cow position:
Alignm length: 668
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 516

Conread position: 6-667
Cow position:
Alignm length: 667
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 103

Conread position: 8-332
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 8-355
Cow position:
Alignm length: 349
Alignm identity: 219
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 84

Conread position: 8-637
Cow position:
Alignm length: 631
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 166

Conread position: 8-667
Cow position:
Alignm length: 661
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 593, 582

Conread position: 9-427
Cow position:
Alignm length: 422
Alignm identity: 260
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 90

Conread position: 9-630
Cow position:
Alignm length: 623
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 158

Conread position: 9-667
Cow position:
Alignm length: 667
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 42

Conread position: 9-667
Cow position:
Alignm length: 661
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 498, 509

Conread position: 9-667
Cow position:
Alignm length: 660
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 592, 581

Conread position: 11-666
Cow position:
Alignm length: 664
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 250

Conread position: 12-505
Cow position:
Alignm length: 496
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 334

Conread position: 12-561
Cow position:
Alignm length: 553
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 15

Conread position: 12-639
Cow position:
Alignm length: 632
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 260

Conread position: 14-505
Cow position:
Alignm length: 496
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 9

Conread position: 15-439
Cow position:
Alignm length: 428
Alignm identity: 276
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 140, 113

Conread position: 15-667
Cow position:
Alignm length: 654
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 573, 585

Conread position: 19-667
Cow position:
Alignm length: 651
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 246

Conread position: 21-506
Cow position:
Alignm length: 488
Alignm identity: 287
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 72

Conread position: 23-584
Cow position:
Alignm length: 564
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 75

Conread position: 23-663
Cow position:
Alignm length: 644
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 66

Conread position: 24-485
Cow position:
Alignm length: 473
Alignm identity: 298
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 87

Conread position: 25-527
Cow position:
Alignm length: 508
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 87

Conread position: 25-667
Cow position:
Alignm length: 652
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 64

Conread position: 25-667
Cow position:
Alignm length: 648
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 321

Conread position: 26-424
Cow position:
Alignm length: 404
Alignm identity: 267
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 158, 146

Conread position: 26-429
Cow position:
Alignm length: 406
Alignm identity: 262
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 315, 320

Conread position: 26-584
Cow position:
Alignm length: 559
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-585
Cow position:
Alignm length: 566
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 86

Conread position: 26-662
Cow position:
Alignm length: 644
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 59

Conread position: 26-667
Cow position:
Alignm length: 645
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 75

Conread position: 26-667
Cow position:
Alignm length: 651
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 86

Conread position: 26-667
Cow position:
Alignm length: 649
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 85

Conread position: 26-667
Cow position:
Alignm length: 650
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 86

Conread position: 26-667
Cow position:
Alignm length: 645
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 236

Conread position: 26-667
Cow position:
Alignm length: 645
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 405

Conread position: 27-546
Cow position:
Alignm length: 522
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 76

Conread position: 27-588
Cow position:
Alignm length: 564
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 421

Conread position: 27-667
Cow position:
Alignm length: 643
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 244

Conread position: 27-667
Cow position:
Alignm length: 644
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 27-667
Cow position:
Alignm length: 642
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 27-667
Cow position:
Alignm length: 647
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 184

Conread position: 32-667
Cow position:
Alignm length: 642
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 80

Conread position: 34-585
Cow position:
Alignm length: 561
Alignm identity: 343
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 60

Conread position: 35-667
Cow position:
Alignm length: 637
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 57

Conread position: 39-603
Cow position:
Alignm length: 572
Alignm identity: 358
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 44, 73

Conread position: 42-585
Cow position:
Alignm length: 551
Alignm identity: 335
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 50

Conread position: 44-664
Cow position:
Alignm length: 626
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 134

Conread position: 108-667
Cow position:
Alignm length: 569
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 144

Conread position: 115-667
Cow position:
Alignm length: 555
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 119-339
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 119-667
Cow position:
Alignm length: 554
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 154

Conread position: 123-508
Cow position:
Alignm length: 387
Alignm identity: 244
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 306, 118

Conread position: 126-667
Cow position:
Alignm length: 544
Alignm identity: 335
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 155, 138

Conread position: 137-667
Cow position:
Alignm length: 536
Alignm identity: 333
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 43

Conread position: 141-667
Cow position:
Alignm length: 531
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 157-667
Cow position:
Alignm length: 515
Alignm identity: 314
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 191, 177

Conread position: 184-667
Cow position:
Alignm length: 486
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 88

Conread position: 194-667
Cow position:
Alignm length: 479
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 195-427
Cow position:
Alignm length: 234
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 71

Conread position: 212-585
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 68

Conread position: 221-667
Cow position:
Alignm length: 450
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 41

Conread position: 221-667
Cow position:
Alignm length: 449
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 47

Conread position: 279-667
Cow position:
Alignm length: 393
Alignm identity: 251
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 142

Conread position: 288-667
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 70, 8

Conread position: 299-667
Cow position:
Alignm length: 371
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 445-667
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.