Cow genome map
| Conread name: | recc2818c_g16.y1 |
| Conread position: | 1-463 |
| Cow position: | chr7:42878735-42878273 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 344 |
| Conread position: | 1-584 |
| Cow position: | chr7:1438120-1438701 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 350 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 153, 77 |
| Conread position: | 1-630 |
| Cow position: | chr7:11601066-11600437 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 88 |
| Conread position: | 1-666 |
| Cow position: | chr7:1014142-1014801 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 1-667 |
| Cow position: | chr7:11601150-11600484 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 603, 611 |
| Conread position: | 1-667 |
| Cow position: | chr7:42879323-42878657 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 506, 516 |
| Conread position: | 6-667 |
| Cow position: | chr7:8277637-8278299 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 8-332 |
| Cow position: | chr7:1439935-1440258 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 8-355 |
| Cow position: | chr7:1438377-1438724 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 8-637 |
| Cow position: | chr7:3180161-3180790 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 166 |
| Conread position: | 8-667 |
| Cow position: | chr7:42879064-42878405 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 593, 582 |
| Conread position: | 9-427 |
| Cow position: | chr7:1438294-1438712 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 79, 90 |
| Conread position: | 9-630 |
| Cow position: | chr7:42878895-42878274 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 158 |
| Conread position: | 9-667 |
| Cow position: | chr7:1439598-1440257 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 9-667 |
| Cow position: | chr7:42878979-42878321 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 498, 509 |
| Conread position: | 9-667 |
| Cow position: | chr7:42879231-42878573 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 592, 581 |
| Conread position: | 11-666 |
| Cow position: | chr7:8277219-8277878 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 250 |
| Conread position: | 12-505 |
| Cow position: | chr7:18390294-18390787 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 334 |
| Conread position: | 12-561 |
| Cow position: | chr7:1014903-1015452 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 12-639 |
| Cow position: | chr7:3180249-3180875 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 260 |
| Conread position: | 14-505 |
| Cow position: | chr7:1014990-1015482 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 15-439 |
| Cow position: | chr7:1439858-1440281 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 140, 113 |
| Conread position: | 15-667 |
| Cow position: | chr7:42879141-42878489 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 573, 585 |
| Conread position: | 19-667 |
| Cow position: | chr7:3179836-3180484 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 246 |
| Conread position: | 21-506 |
| Cow position: | chr7:1438222-1438707 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 287 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 23-584 |
| Cow position: | chr7:1439700-1440258 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 23-663 |
| Cow position: | chr7:3179924-3180564 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 24-485 |
| Cow position: | chr7:8325885-8326341 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 25-527 |
| Cow position: | chr7:8325634-8326135 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 25-667 |
| Cow position: | chr7:8277909-8278549 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 25-667 |
| Cow position: | chr7:18390139-18390781 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 321 |
| Conread position: | 26-424 |
| Cow position: | chr7:8243700-8244095 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 158, 146 |
| Conread position: | 26-429 |
| Cow position: | chr7:18390392-18390795 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 262 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 315, 320 |
| Conread position: | 26-584 |
| Cow position: | chr7:1014833-1015391 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-585 |
| Cow position: | chr7:8325551-8326110 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 26-662 |
| Cow position: | chr7:8243029-8243664 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 26-667 |
| Cow position: | chr7:3179759-3180400 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 26-667 |
| Cow position: | chr7:8243281-8243921 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 26-667 |
| Cow position: | chr7:8324879-8325520 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 26-667 |
| Cow position: | chr7:8325131-8325772 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 26-667 |
| Cow position: | chr7:8325383-8326024 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 236 |
| Conread position: | 26-667 |
| Cow position: | chr7:11601209-11600568 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 414, 405 |
| Conread position: | 27-546 |
| Cow position: | chr7:11600956-11600437 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 27-588 |
| Cow position: | chr7:18390225-18390786 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 421 |
| Conread position: | 27-667 |
| Cow position: | chr7:1014750-1015390 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 244 |
| Conread position: | 27-667 |
| Cow position: | chr7:3180012-3180652 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 67 |
| Conread position: | 27-667 |
| Cow position: | chr7:3180096-3180736 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 27-667 |
| Cow position: | chr7:8242946-8243585 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 184 |
| Conread position: | 32-667 |
| Cow position: | chr7:8325473-8326108 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 80 |
| Conread position: | 34-585 |
| Cow position: | chr7:8278170-8278712 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 343 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 60 |
| Conread position: | 35-667 |
| Cow position: | chr7:1014512-1015138 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 39-603 |
| Cow position: | chr7:8243545-8244104 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 358 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 42-585 |
| Cow position: | chr7:11434822-11434286 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 335 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 44-664 |
| Cow position: | chr7:8324729-8325349 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 134 |
| Conread position: | 108-667 |
| Cow position: | chr7:1439444-1440005 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 144 |
| Conread position: | 115-667 |
| Cow position: | chr7:42879377-42878825 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 119-339 |
| Cow position: | chr7:11434500-11434280 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-667 |
| Cow position: | chr7:8243457-8244003 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 154 |
| Conread position: | 123-508 |
| Cow position: | chr7:11434657-11434279 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 306, 118 |
| Conread position: | 126-667 |
| Cow position: | chr7:11434822-11434288 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 335 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 155, 138 |
| Conread position: | 137-667 |
| Cow position: | chr7:8242804-8243334 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 333 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 141-667 |
| Cow position: | chr7:3179706-3180232 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 157-667 |
| Cow position: | chr7:1438190-1438700 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 191, 177 |
| Conread position: | 184-667 |
| Cow position: | chr7:18390046-18390529 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 88 |
| Conread position: | 194-667 |
| Cow position: | chr7:8324795-8325268 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 195-427 |
| Cow position: | chr7:11434508-11434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 71 |
| Conread position: | 212-585 |
| Cow position: | chr7:11434974-11434615 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 221-667 |
| Cow position: | chr7:8242804-8243250 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 221-667 |
| Cow position: | chr7:18389999-18390445 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 47 |
| Conread position: | 279-667 |
| Cow position: | chr7:1014084-1014472 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 124, 142 |
| Conread position: | 288-667 |
| Cow position: | chr7:8324722-8325100 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 70, 8 |
| Conread position: | 299-667 |
| Cow position: | chr7:42879447-42879077 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 445-667 |
| Cow position: | chr7:11601210-11600988 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.