Cow genome map

Conread name: recc2818c_g18.y1

Conread position: 2-326
Cow position: chr1:3429611-3429292 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 209
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 84

Conread position: 4-234
Cow position: chr1:5135794-5135579 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 170, 27

Conread position: 4-236
Cow position: chr1:99793451-99793681 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 15

Conread position: 4-301
Cow position: chr1:69551584-69551283 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 81

Conread position: 4-322
Cow position: chr1:86113505-86113185 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 106

Conread position: 4-335
Cow position: chr1:73960605-73960919 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 26, 70

Conread position: 4-338
Cow position: chr1:76613227-76612899 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 170, 27

Conread position: 5-158
Cow position: chr1:44155150-44155303 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 117

Conread position: 5-179
Cow position: chr1:87440369-87440542 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 119

Conread position: 5-200
Cow position: chr1:26729623-26729809 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 187, 66

Conread position: 5-210
Cow position: chr1:19227154-19226951 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 66

Conread position: 5-216
Cow position: chr1:85866049-85866272 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 68

Conread position: 5-216
Cow position: chr1:91039268-91039061 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 77

Conread position: 5-225
Cow position: chr1:81913247-81913033 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 5

Conread position: 5-226
Cow position: chr1:42874046-42873827 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 166, 34

Conread position: 5-226
Cow position: chr1:100393260-100393040 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 167, 75

Conread position: 5-234
Cow position: chr1:6752327-6752101 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 167, 66

Conread position: 5-238
Cow position: chr1:85647881-85647648 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 74

Conread position: 5-242
Cow position: chr1:5539373-5539136 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 80

Conread position: 5-244
Cow position: chr1:39510148-39509916 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 169, 67

Conread position: 5-244
Cow position: chr1:57900838-57900582 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 111

Conread position: 5-244
Cow position: chr1:81580076-81580319 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 65, 122

Conread position: 5-244
Cow position: chr1:81613290-81613530 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 79

Conread position: 5-251
Cow position: chr1:90868540-90868298 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 82

Conread position: 5-257
Cow position: chr1:93554745-93554989 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 167, 71

Conread position: 5-258
Cow position: chr1:74822356-74822607 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 167, 66

Conread position: 5-265
Cow position: chr1:11913976-11913714 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 77

Conread position: 5-265
Cow position: chr1:52039537-52039793 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 121

Conread position: 5-272
Cow position: chr1:91811688-91811949 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 167, 66

Conread position: 5-273
Cow position: chr1:84910727-84910473 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 48

Conread position: 5-274
Cow position: chr1:53458597-53458867 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 73

Conread position: 5-276
Cow position: chr1:76019791-76019526 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 84

Conread position: 5-280
Cow position: chr1:98461194-98461452 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 170, 47

Conread position: 5-281
Cow position: chr1:53397892-53398149 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 169, 73

Conread position: 5-288
Cow position: chr1:83747847-83748126 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 167, 47

Conread position: 5-291
Cow position: chr1:6941364-6941652 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 74

Conread position: 5-291
Cow position: chr1:6958777-6959065 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 74

Conread position: 5-291
Cow position: chr1:43389149-43388868 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 92

Conread position: 5-302
Cow position: chr1:2976093-2975792 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 66

Conread position: 5-305
Cow position: chr1:8523-8818 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 169, 68

Conread position: 5-305
Cow position: chr1:68855069-68855366 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 76

Conread position: 5-307
Cow position: chr1:16767182-16766884 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 68

Conread position: 5-307
Cow position: chr1:22944125-22943826 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 81

Conread position: 5-307
Cow position: chr1:27463032-27463330 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 25, 124

Conread position: 5-308
Cow position: chr1:48444293-48443988 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 79

Conread position: 5-309
Cow position: chr1:38753821-38754121 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 88

Conread position: 5-310
Cow position: chr1:261578-261259 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 119

Conread position: 5-310
Cow position: chr1:10942191-10941893 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 123

Conread position: 5-310
Cow position: chr1:10964195-10964493 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 123

Conread position: 5-310
Cow position: chr1:14206254-14205959 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 125

Conread position: 5-310
Cow position: chr1:18936928-18936632 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 119, 75

Conread position: 5-310
Cow position: chr1:49317595-49317296 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 26, 72

Conread position: 5-310
Cow position: chr1:51394322-51394623 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 54, 76

Conread position: 5-310
Cow position: chr1:52496684-52496973 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 49

Conread position: 5-310
Cow position: chr1:70434904-70435191 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 169, 68

Conread position: 5-310
Cow position: chr1:81228437-81228131 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 129

Conread position: 5-310
Cow position: chr1:92197365-92197659 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 172, 32

Conread position: 5-310
Cow position: chr1:95100864-95101156 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 225, 72

Conread position: 5-311
Cow position: chr1:10632949-10633246 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 56

Conread position: 5-312
Cow position: chr1:3323772-3324081 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 164, 76

Conread position: 5-312
Cow position: chr1:8129066-8128771 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 88

Conread position: 5-316
Cow position: chr1:87197728-87198039 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 33

Conread position: 5-317
Cow position: chr1:83072344-83072653 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 123

Conread position: 5-322
Cow position: chr1:26178906-26178590 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 167, 74

Conread position: 5-322
Cow position: chr1:69678421-69678108 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 17

Conread position: 5-322
Cow position: chr1:78079629-78079942 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 167, 14

Conread position: 5-322
Cow position: chr1:101714022-101714330 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 17

Conread position: 5-323
Cow position: chr1:54258465-54258787 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 128

Conread position: 5-323
Cow position: chr1:64678602-64678896 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 169, 74

Conread position: 5-323
Cow position: chr1:85162643-85162311 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 68

Conread position: 5-324
Cow position: chr1:41181746-41182055 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 65

Conread position: 5-324
Cow position: chr1:82936685-82936386 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 52

Conread position: 5-325
Cow position: chr1:89388244-89388563 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 78

Conread position: 5-326
Cow position: chr1:77232667-77232353 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 66

Conread position: 5-327
Cow position: chr1:81290408-81290729 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 5-327
Cow position: chr1:92996995-92996664 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 53

Conread position: 5-328
Cow position: chr1:10716403-10716725 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 35

Conread position: 5-329
Cow position: chr1:7971322-7971628 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 46, 39

Conread position: 5-329
Cow position: chr1:28563666-28563335 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 67, 121

Conread position: 5-330
Cow position: chr1:19482174-19481876 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 32

Conread position: 5-330
Cow position: chr1:26934360-26934043 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 74

Conread position: 5-331
Cow position: chr1:96081387-96081702 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 207, 76

Conread position: 5-331
Cow position: chr1:98583664-98583973 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 65

Conread position: 5-332
Cow position: chr1:197103-196781 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 80

Conread position: 5-332
Cow position: chr1:37322101-37321782 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 5-332
Cow position: chr1:68217458-68217141 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 57

Conread position: 5-333
Cow position: chr1:22827068-22827374 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 26

Conread position: 5-333
Cow position: chr1:70538508-70538829 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 5-333
Cow position: chr1:101268106-101267775 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 122

Conread position: 5-334
Cow position: chr1:23999020-23998695 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 207, 59

Conread position: 5-334
Cow position: chr1:55429054-55428726 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 5-337
Cow position: chr1:53369984-53370318 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 122

Conread position: 5-337
Cow position: chr1:56225694-56226014 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 76

Conread position: 5-337
Cow position: chr1:64804201-64803864 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 71

Conread position: 5-339
Cow position: chr1:85339305-85339610 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 172, 47

Conread position: 5-340
Cow position: chr1:96305076-96304739 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 114

Conread position: 5-342
Cow position: chr1:71350822-71350486 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 74

Conread position: 5-343
Cow position: chr1:33206970-33206635 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 75

Conread position: 5-343
Cow position: chr1:37886909-37886564 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 84

Conread position: 5-343
Cow position: chr1:61884820-61885150 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 37

Conread position: 5-344
Cow position: chr1:23186893-23186565 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 169, 22

Conread position: 5-346
Cow position: chr1:13810556-13810897 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 61

Conread position: 5-348
Cow position: chr1:45019901-45019563 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 126

Conread position: 5-349
Cow position: chr1:52435175-52435522 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 62

Conread position: 5-350
Cow position: chr1:13548082-13547742 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 16

Conread position: 5-350
Cow position: chr1:20104169-20104511 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 62

Conread position: 5-350
Cow position: chr1:68845582-68845254 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 54

Conread position: 5-351
Cow position: chr1:29935479-29935147 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 26

Conread position: 5-351
Cow position: chr1:33720020-33720351 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 45

Conread position: 6-225
Cow position: chr1:24876169-24876384 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 165, 67

Conread position: 6-244
Cow position: chr1:3882563-3882319 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 86

Conread position: 6-253
Cow position: chr1:93043931-93044162 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 166, 32

Conread position: 6-310
Cow position: chr1:7739856-7740148 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 168, 41

Conread position: 6-310
Cow position: chr1:41056584-41056885 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 67

Conread position: 6-321
Cow position: chr1:1956426-1956123 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 78

Conread position: 6-322
Cow position: chr1:21955470-21955154 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 66

Conread position: 6-323
Cow position: chr1:40192782-40192484 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 221, 16

Conread position: 6-326
Cow position: chr1:37726513-37726196 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 59

Conread position: 6-326
Cow position: chr1:46693748-46693424 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 166, 76

Conread position: 6-343
Cow position: chr1:93499532-93499857 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 136, 38

Conread position: 6-349
Cow position: chr1:38418934-38419268 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 22, 35

Conread position: 7-227
Cow position: chr1:85028861-85029078 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 78

Conread position: 7-244
Cow position: chr1:71253650-71253414 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 68

Conread position: 7-307
Cow position: chr1:24909150-24908841 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 66

Conread position: 7-310
Cow position: chr1:88397937-88397637 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 76

Conread position: 7-320
Cow position: chr1:74929810-74929492 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 33, 82

Conread position: 7-323
Cow position: chr1:81569128-81568811 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 56

Conread position: 7-325
Cow position: chr1:22836301-22836619 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 66

Conread position: 7-335
Cow position: chr1:42256600-42256278 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 125

Conread position: 7-338
Cow position: chr1:70343945-70344279 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 64

Conread position: 7-343
Cow position: chr1:70227789-70227452 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 11

Conread position: 7-343
Cow position: chr1:73545999-73545673 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 167, 66

Conread position: 8-351
Cow position: chr1:52994929-52995281 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 115

Conread position: 9-243
Cow position: chr1:3167164-3166935 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 163, 64

Conread position: 9-294
Cow position: chr1:98467718-98467991 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 163, 34

Conread position: 10-219
Cow position: chr1:89497866-89498062 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 22

Conread position: 10-321
Cow position: chr1:84812031-84811724 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 71

Conread position: 10-351
Cow position: chr1:70428638-70428988 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 12

Conread position: 11-225
Cow position: chr1:98594485-98594687 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 161, 60

Conread position: 12-351
Cow position: chr1:98575959-98576301 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 51, 69

Conread position: 14-226
Cow position: chr1:4581417-4581208 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 67

Conread position: 15-183
Cow position: chr1:61560811-61560644 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 108

Conread position: 15-310
Cow position: chr1:37707057-37706764 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 159, 113

Conread position: 18-324
Cow position: chr1:79135198-79135498 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 31, 112

Conread position: 20-327
Cow position: chr1:61005634-61005335 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 36

Conread position: 21-157
Cow position: chr1:41695522-41695654 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 21-217
Cow position: chr1:61542995-61542805 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 151, 55

Conread position: 21-220
Cow position: chr1:93810352-93810546 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 21-305
Cow position: chr1:15333807-15334088 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 109

Conread position: 21-311
Cow position: chr1:11853762-11853480 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 153, 52

Conread position: 21-348
Cow position: chr1:6394481-6394800 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 158, 51

Conread position: 21-350
Cow position: chr1:41289855-41289534 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 215
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 153, 41

Conread position: 22-210
Cow position: chr1:81355785-81355597 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 59

Conread position: 22-210
Cow position: chr1:92433924-92434105 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 49

Conread position: 22-211
Cow position: chr1:7350466-7350655 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 100

Conread position: 22-211
Cow position: chr1:81563660-81563852 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 104

Conread position: 22-213
Cow position: chr1:44125723-44125529 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 108

Conread position: 22-214
Cow position: chr1:12978604-12978793 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 150, 41

Conread position: 22-216
Cow position: chr1:38401718-38401912 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 150, 97

Conread position: 22-216
Cow position: chr1:45288948-45288759 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 150, 51

Conread position: 22-216
Cow position: chr1:80900041-80900232 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 47

Conread position: 22-222
Cow position: chr1:70380222-70380024 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 91

Conread position: 22-222
Cow position: chr1:89349886-89350084 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 51

Conread position: 22-224
Cow position: chr1:4291084-4291285 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 107

Conread position: 22-232
Cow position: chr1:3790142-3789942 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 41

Conread position: 22-233
Cow position: chr1:67688656-67688452 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 52

Conread position: 22-233
Cow position: chr1:91874985-91874786 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 187, 51

Conread position: 22-235
Cow position: chr1:96947793-96947588 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 187, 36

Conread position: 22-235
Cow position: chr1:100800280-100800482 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 150, 35

Conread position: 22-238
Cow position: chr1:7023044-7023257 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 152, 26

Conread position: 22-238
Cow position: chr1:25281737-25281523 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 149, 106

Conread position: 22-240
Cow position: chr1:18780412-18780193 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 104, 18

Conread position: 22-240
Cow position: chr1:84255687-84255903 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 150, 99

Conread position: 22-243
Cow position: chr1:47233555-47233335 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 152, 43

Conread position: 22-243
Cow position: chr1:68253515-68253736 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 120, 37

Conread position: 22-243
Cow position: chr1:77880812-77880594 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 33

Conread position: 22-244
Cow position: chr1:45553320-45553101 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 150, 101

Conread position: 22-244
Cow position: chr1:48769727-48769943 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 150, 49

Conread position: 22-244
Cow position: chr1:68672676-68672462 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 51

Conread position: 22-244
Cow position: chr1:85550154-85549936 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 150, 49

Conread position: 22-244
Cow position: chr1:95153143-95153362 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 58

Conread position: 22-245
Cow position: chr1:4032552-4032773 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 152, 106

Conread position: 22-247
Cow position: chr1:41047380-41047157 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 71, 60

Conread position: 22-249
Cow position: chr1:80841576-80841791 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 44

Conread position: 22-254
Cow position: chr1:89230306-89230080 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 26

Conread position: 22-254
Cow position: chr1:89342071-89341832 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 213

Conread position: 22-260
Cow position: chr1:32001397-32001167 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 110

Conread position: 22-272
Cow position: chr1:51044382-51044141 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 61

Conread position: 22-272
Cow position: chr1:69695068-69694831 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 150, 49

Conread position: 22-279
Cow position: chr1:31348516-31348261 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 59

Conread position: 22-279
Cow position: chr1:96277130-96276879 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 150, 49

Conread position: 22-281
Cow position: chr1:13637741-13637489 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 152, 47

Conread position: 22-281
Cow position: chr1:51770012-51770271 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 51

Conread position: 22-284
Cow position: chr1:98511852-98512120 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 152, 51

Conread position: 22-290
Cow position: chr1:33913744-33914016 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 58

Conread position: 22-290
Cow position: chr1:95557960-95558225 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 134, 51

Conread position: 22-290
Cow position: chr1:100761999-100762259 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 144, 47

Conread position: 22-291
Cow position: chr1:5128367-5128641 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 39

Conread position: 22-291
Cow position: chr1:14309111-14308843 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 51

Conread position: 22-291
Cow position: chr1:33409701-33409437 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 150, 59

Conread position: 22-291
Cow position: chr1:71079034-71078776 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 42

Conread position: 22-294
Cow position: chr1:6077822-6078089 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 41

Conread position: 22-294
Cow position: chr1:93528622-93528883 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 48

Conread position: 22-294
Cow position: chr1:98030838-98031104 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 110

Conread position: 22-297
Cow position: chr1:95499570-95499304 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 157, 59

Conread position: 22-298
Cow position: chr1:17196706-17196432 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 59

Conread position: 22-299
Cow position: chr1:100400272-100400010 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 205, 59

Conread position: 22-301
Cow position: chr1:82884466-82884180 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 187, 44

Conread position: 22-304
Cow position: chr1:34856707-34856425 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 155, 59

Conread position: 22-304
Cow position: chr1:72813538-72813817 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 152, 59

Conread position: 22-306
Cow position: chr1:43872407-43872108 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 78

Conread position: 22-306
Cow position: chr1:45555288-45555566 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 150, 51

Conread position: 22-306
Cow position: chr1:48105510-48105224 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 91

Conread position: 22-306
Cow position: chr1:57575835-57575563 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 153, 30

Conread position: 22-306
Cow position: chr1:67585472-67585752 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 114

Conread position: 22-306
Cow position: chr1:82337857-82337579 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 94

Conread position: 22-306
Cow position: chr1:89448821-89449099 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 47

Conread position: 22-306
Cow position: chr1:99609292-99609568 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 34, 21

Conread position: 22-308
Cow position: chr1:33331164-33330899 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 152, 48

Conread position: 22-309
Cow position: chr1:49433337-49433055 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 152, 42

Conread position: 22-309
Cow position: chr1:62964201-62964472 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 152, 24

Conread position: 22-309
Cow position: chr1:65028455-65028724 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 51

Conread position: 22-310
Cow position: chr1:874574-874868 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 152, 106

Conread position: 22-310
Cow position: chr1:5858763-5858467 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 48

Conread position: 22-310
Cow position: chr1:6166166-6166437 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 26

Conread position: 22-310
Cow position: chr1:21787254-21787529 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 108

Conread position: 22-310
Cow position: chr1:26895903-26895607 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 216

Conread position: 22-310
Cow position: chr1:34771580-34771294 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 152, 22

Conread position: 22-310
Cow position: chr1:42398270-42397991 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 51

Conread position: 22-310
Cow position: chr1:42869015-42868745 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 59

Conread position: 22-310
Cow position: chr1:50931052-50930775 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 152, 9

Conread position: 22-310
Cow position: chr1:59518842-59519116 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 152, 106

Conread position: 22-310
Cow position: chr1:64302324-64302045 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 141, 99

Conread position: 22-310
Cow position: chr1:64572437-64572719 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 51

Conread position: 22-310
Cow position: chr1:68763759-68763479 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 154, 30

Conread position: 22-310
Cow position: chr1:74956097-74955827 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 152, 106

Conread position: 22-310
Cow position: chr1:75744784-75745065 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 42

Conread position: 22-310
Cow position: chr1:87072621-87072899 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 133, 18

Conread position: 22-310
Cow position: chr1:91066229-91065952 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 152, 61

Conread position: 22-310
Cow position: chr1:100576116-100575836 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 110

Conread position: 22-311
Cow position: chr1:35162333-35162611 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 150, 59

Conread position: 22-311
Cow position: chr1:70422229-70422508 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 152, 46

Conread position: 22-312
Cow position: chr1:11172299-11172575 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 152, 54

Conread position: 22-314
Cow position: chr1:79165161-79164872 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 48

Conread position: 22-315
Cow position: chr1:41696982-41697263 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 144, 49

Conread position: 22-315
Cow position: chr1:68619009-68618725 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 152, 58

Conread position: 22-315
Cow position: chr1:82513432-82513142 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 59

Conread position: 22-315
Cow position: chr1:101822577-101822294 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 205, 22

Conread position: 22-316
Cow position: chr1:25383587-25383881 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 91

Conread position: 22-316
Cow position: chr1:47886562-47886271 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 103, 59

Conread position: 22-316
Cow position: chr1:54478248-54478528 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 100

Conread position: 22-317
Cow position: chr1:39427078-39426802 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 150, 51

Conread position: 22-317
Cow position: chr1:78810963-78811251 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 18

Conread position: 22-318
Cow position: chr1:4391359-4391053 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 66

Conread position: 22-318
Cow position: chr1:72356282-72356582 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 26

Conread position: 22-318
Cow position: chr1:84282998-84283285 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 150, 46

Conread position: 22-319
Cow position: chr1:4701748-4701457 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 51

Conread position: 22-319
Cow position: chr1:65318500-65318792 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 33

Conread position: 22-321
Cow position: chr1:43352734-43352439 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 150, 101

Conread position: 22-321
Cow position: chr1:53374355-53374643 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 190, 59

Conread position: 22-321
Cow position: chr1:79640367-79640072 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 22-322
Cow position: chr1:5479758-5479443 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 224

Conread position: 22-322
Cow position: chr1:22728975-22729269 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 102

Conread position: 22-322
Cow position: chr1:30189070-30189374 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 59

Conread position: 22-322
Cow position: chr1:53622884-53623175 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 151, 22

Conread position: 22-322
Cow position: chr1:89509999-89509713 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 30

Conread position: 22-322
Cow position: chr1:96964244-96964538 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 152, 40

Conread position: 22-323
Cow position: chr1:56618727-56618438 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 51

Conread position: 22-323
Cow position: chr1:68817875-68817586 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 58

Conread position: 22-323
Cow position: chr1:69539621-69539901 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 149, 49

Conread position: 22-323
Cow position: chr1:71295382-71295085 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 30

Conread position: 22-324
Cow position: chr1:484542-484243 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 152, 51

Conread position: 22-324
Cow position: chr1:10778490-10778773 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 150, 30

Conread position: 22-324
Cow position: chr1:20667818-20667531 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 152, 54

Conread position: 22-324
Cow position: chr1:31765463-31765147 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 53

Conread position: 22-324
Cow position: chr1:43505448-43505742 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 101

Conread position: 22-324
Cow position: chr1:49825146-49824846 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 106

Conread position: 22-324
Cow position: chr1:52467225-52467504 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 152, 65

Conread position: 22-324
Cow position: chr1:61012233-61012527 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 150, 99

Conread position: 22-324
Cow position: chr1:66898573-66898273 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 152, 40

Conread position: 22-325
Cow position: chr1:4414284-4414009 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 22-325
Cow position: chr1:12464742-12464448 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 58

Conread position: 22-325
Cow position: chr1:24542658-24542348 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 89

Conread position: 22-325
Cow position: chr1:24778062-24777764 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 189, 27

Conread position: 22-325
Cow position: chr1:56225390-56225686 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 58

Conread position: 22-325
Cow position: chr1:66138244-66138543 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 152, 48

Conread position: 22-325
Cow position: chr1:73458170-73457876 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 153, 42

Conread position: 22-325
Cow position: chr1:90621584-90621286 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 30

Conread position: 22-325
Cow position: chr1:102105655-102105958 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 26

Conread position: 22-326
Cow position: chr1:4243418-4243107 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 97, 62

Conread position: 22-327
Cow position: chr1:21954308-21954005 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 42, 113

Conread position: 22-327
Cow position: chr1:63390847-63390544 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 48

Conread position: 22-328
Cow position: chr1:71666009-71665710 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 150, 33

Conread position: 22-328
Cow position: chr1:78838722-78839011 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 155, 14

Conread position: 22-328
Cow position: chr1:91023544-91023244 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 22-329
Cow position: chr1:78857398-78857102 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 40

Conread position: 22-330
Cow position: chr1:3923871-3923578 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 153, 33

Conread position: 22-330
Cow position: chr1:46030883-46031189 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 152, 56

Conread position: 22-330
Cow position: chr1:72068915-72068606 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 152, 106

Conread position: 22-331
Cow position: chr1:22823827-22824135 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 27

Conread position: 22-331
Cow position: chr1:51445804-51446109 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 22-331
Cow position: chr1:94226628-94226318 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 152, 34

Conread position: 22-332
Cow position: chr1:29474424-29474128 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 61

Conread position: 22-332
Cow position: chr1:31607971-31607668 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 90

Conread position: 22-332
Cow position: chr1:90904830-90904530 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 36

Conread position: 22-332
Cow position: chr1:90976161-90975849 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 152, 54

Conread position: 22-332
Cow position: chr1:94875751-94875437 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 152, 51

Conread position: 22-332
Cow position: chr1:97755440-97755727 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 191, 107

Conread position: 22-332
Cow position: chr1:97794625-97794321 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 52

Conread position: 22-332
Cow position: chr1:98059973-98060283 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 61, 70

Conread position: 22-333
Cow position: chr1:20000827-20000529 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 153, 11

Conread position: 22-333
Cow position: chr1:35600373-35600064 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 110, 47

Conread position: 22-333
Cow position: chr1:42482127-42482425 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 191, 37

Conread position: 22-333
Cow position: chr1:43311852-43311537 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 67, 18

Conread position: 22-333
Cow position: chr1:78091959-78092273 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 153, 58

Conread position: 22-333
Cow position: chr1:86110807-86110517 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 44

Conread position: 22-333
Cow position: chr1:88913242-88913548 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 51

Conread position: 22-333
Cow position: chr1:99642442-99642140 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 150, 56

Conread position: 22-334
Cow position: chr1:4691519-4691814 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 152, 59

Conread position: 22-334
Cow position: chr1:23488583-23488273 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 49

Conread position: 22-334
Cow position: chr1:35554829-35555144 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 179

Conread position: 22-334
Cow position: chr1:101866573-101866267 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 12

Conread position: 22-335
Cow position: chr1:54156808-54156504 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 152, 26

Conread position: 22-335
Cow position: chr1:73584487-73584171 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 61

Conread position: 22-335
Cow position: chr1:98551640-98551962 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 150, 100

Conread position: 22-335
Cow position: chr1:100551893-100552195 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 51

Conread position: 22-335
Cow position: chr1:101834747-101835043 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 150, 18

Conread position: 22-335
Cow position: chr1:102306219-102305920 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 59

Conread position: 22-336
Cow position: chr1:42175648-42175959 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 47

Conread position: 22-336
Cow position: chr1:92369656-92369979 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 153, 106

Conread position: 22-337
Cow position: chr1:47790742-47790438 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 183, 106

Conread position: 22-337
Cow position: chr1:82880568-82880863 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 152, 57

Conread position: 22-337
Cow position: chr1:86682638-86682336 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 62

Conread position: 22-338
Cow position: chr1:56477511-56477822 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 100

Conread position: 22-338
Cow position: chr1:74751711-74751395 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 98, 8

Conread position: 22-338
Cow position: chr1:102266344-102266037 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 152, 18

Conread position: 22-339
Cow position: chr1:34159761-34160062 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 33

Conread position: 22-339
Cow position: chr1:38278110-38277788 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 14, 41

Conread position: 22-340
Cow position: chr1:1981191-1980874 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 60

Conread position: 22-340
Cow position: chr1:10616804-10617130 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 61

Conread position: 22-340
Cow position: chr1:31934436-31934737 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 154, 43

Conread position: 22-340
Cow position: chr1:71119440-71119757 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 22-341
Cow position: chr1:54206895-54206582 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 32

Conread position: 22-341
Cow position: chr1:55705326-55705012 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 100

Conread position: 22-342
Cow position: chr1:57297400-57297744 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 108

Conread position: 22-343
Cow position: chr1:24133135-24132824 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 30

Conread position: 22-343
Cow position: chr1:62519282-62519607 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 47, 90

Conread position: 22-343
Cow position: chr1:71399208-71399531 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 89, 67

Conread position: 22-343
Cow position: chr1:91651436-91651114 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 209
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 59

Conread position: 22-344
Cow position: chr1:635761-635444 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 130, 48

Conread position: 22-345
Cow position: chr1:17875787-17875472 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 210
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 152, 108

Conread position: 22-345
Cow position: chr1:43855225-43855530 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 152, 59

Conread position: 22-346
Cow position: chr1:74084271-74083948 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 109

Conread position: 22-346
Cow position: chr1:76740755-76740430 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 157, 59

Conread position: 22-347
Cow position: chr1:648248-648567 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 208
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 152, 42

Conread position: 22-347
Cow position: chr1:75250035-75250352 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 152, 97

Conread position: 22-348
Cow position: chr1:81477948-81477617 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 59

Conread position: 22-349
Cow position: chr1:6304939-6304633 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 152, 51

Conread position: 22-351
Cow position: chr1:6228660-6228335 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 155, 46

Conread position: 22-351
Cow position: chr1:48214238-48213899 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 103

Conread position: 22-351
Cow position: chr1:63434882-63434555 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 152, 51

Conread position: 22-351
Cow position: chr1:78096848-78097168 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 22-351
Cow position: chr1:102753776-102754096 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 109, 60

Conread position: 23-232
Cow position: chr1:83583010-83582805 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 145, 17

Conread position: 23-233
Cow position: chr1:98360473-98360275 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 31

Conread position: 23-294
Cow position: chr1:49082665-49082935 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 151, 60

Conread position: 23-304
Cow position: chr1:79003898-79004175 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 189, 60

Conread position: 23-314
Cow position: chr1:100474156-100474448 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 58

Conread position: 23-328
Cow position: chr1:1877954-1878243 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 151, 54

Conread position: 23-329
Cow position: chr1:89381199-89381497 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 151, 57

Conread position: 23-330
Cow position: chr1:72011884-72011595 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 146, 43

Conread position: 23-333
Cow position: chr1:53402706-53403009 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 101, 37

Conread position: 23-347
Cow position: chr1:35671466-35671778 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 51

Conread position: 23-349
Cow position: chr1:70094267-70094583 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 206, 47

Conread position: 23-351
Cow position: chr1:77986497-77986170 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 90, 46

Conread position: 24-221
Cow position: chr1:88652556-88652754 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 28

Conread position: 24-304
Cow position: chr1:24581508-24581766 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 150, 18

Conread position: 24-315
Cow position: chr1:61391863-61391586 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 48, 105

Conread position: 24-336
Cow position: chr1:75247689-75248005 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 206
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 55

Conread position: 26-272
Cow position: chr1:53520840-53521081 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 149, 47

Conread position: 26-317
Cow position: chr1:61564724-61564993 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 181, 46

Conread position: 26-324
Cow position: chr1:42541525-42541810 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 147, 45

Conread position: 26-326
Cow position: chr1:97820615-97820902 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 189, 44

Conread position: 26-332
Cow position: chr1:101158844-101159153 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 148, 9

Conread position: 26-333
Cow position: chr1:74319853-74319558 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 105, 47

Conread position: 26-337
Cow position: chr1:6102984-6102668 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 58

Conread position: 26-337
Cow position: chr1:89158202-89157901 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 103

Conread position: 27-306
Cow position: chr1:30983562-30983291 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 150, 46

Conread position: 27-307
Cow position: chr1:70828828-70829098 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 101, 120

Conread position: 27-325
Cow position: chr1:186348-186063 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 43

Conread position: 27-326
Cow position: chr1:92684763-92684460 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 17

Conread position: 28-291
Cow position: chr1:2971840-2972106 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 105

Conread position: 28-323
Cow position: chr1:61846075-61846376 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 146, 36

Conread position: 29-294
Cow position: chr1:45223510-45223765 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 144, 51

Conread position: 30-310
Cow position: chr1:627893-628173 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 43

Conread position: 31-280
Cow position: chr1:88926453-88926204 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 166
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 52

Conread position: 31-299
Cow position: chr1:77425679-77425417 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 143, 33

Conread position: 31-322
Cow position: chr1:52139700-52139412 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 49

Conread position: 31-323
Cow position: chr1:46143530-46143249 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 50

Conread position: 31-332
Cow position: chr1:57053129-57053431 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 100, 49

Conread position: 32-310
Cow position: chr1:19516458-19516189 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 57

Conread position: 32-331
Cow position: chr1:5423804-5423506 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 41

Conread position: 33-302
Cow position: chr1:95072264-95072540 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 33-340
Cow position: chr1:54267999-54267701 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 26

Conread position: 34-310
Cow position: chr1:3965775-3966034 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 140, 36

Conread position: 34-323
Cow position: chr1:79844402-79844697 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 139, 59

Conread position: 35-317
Cow position: chr1:78066602-78066330 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 48

Conread position: 36-349
Cow position: chr1:61742032-61741723 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 47

Conread position: 37-310
Cow position: chr1:48618301-48618042 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 137, 27

Conread position: 37-310
Cow position: chr1:88359819-88360090 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 137, 45

Conread position: 37-325
Cow position: chr1:5597271-5596991 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 129, 44

Conread position: 37-325
Cow position: chr1:80584369-80584648 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 33

Conread position: 37-326
Cow position: chr1:101507296-101507570 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 45

Conread position: 38-335
Cow position: chr1:50432548-50432252 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 136, 45

Conread position: 39-243
Cow position: chr1:60901014-60901214 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 42

Conread position: 39-284
Cow position: chr1:44946698-44946931 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 32

Conread position: 39-294
Cow position: chr1:64113854-64113611 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 133, 89

Conread position: 39-326
Cow position: chr1:97303304-97303032 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 34

Conread position: 39-339
Cow position: chr1:30862471-30862175 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 135, 42

Conread position: 40-158
Cow position: chr1:80904708-80904823 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 40-344
Cow position: chr1:79718742-79719046 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 67, 44

Conread position: 42-225
Cow position: chr1:84768936-84768757 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 38

Conread position: 42-336
Cow position: chr1:52662231-52661946 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 132, 39

Conread position: 42-342
Cow position: chr1:3942267-3941980 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 137, 31

Conread position: 44-323
Cow position: chr1:70175596-70175323 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 25

Conread position: 48-310
Cow position: chr1:52912949-52912687 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 164, 33

Conread position: 48-312
Cow position: chr1:81481435-81481179 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 35

Conread position: 48-328
Cow position: chr1:92590144-92590415 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 25

Conread position: 48-340
Cow position: chr1:79630965-79630684 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 82

Conread position: 49-239
Cow position: chr1:95974345-95974534 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 75

Conread position: 49-317
Cow position: chr1:57089733-57089467 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 61

Conread position: 49-325
Cow position: chr1:500123-500396 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 32

Conread position: 51-340
Cow position: chr1:81390869-81391157 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 80

Conread position: 52-305
Cow position: chr1:79146867-79146614 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 43

Conread position: 52-307
Cow position: chr1:97833663-97833899 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 20

Conread position: 53-216
Cow position: chr1:57090930-57091091 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 34

Conread position: 53-312
Cow position: chr1:43286298-43286536 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 121, 28

Conread position: 53-350
Cow position: chr1:102529902-102529609 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 121, 18

Conread position: 54-238
Cow position: chr1:69481996-69481816 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 20

Conread position: 54-310
Cow position: chr1:76658124-76657843 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 19

Conread position: 54-318
Cow position: chr1:3815739-3815468 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 58

Conread position: 54-322
Cow position: chr1:86688200-86687945 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 23

Conread position: 54-323
Cow position: chr1:22035565-22035826 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 25

Conread position: 54-341
Cow position: chr1:60044941-60045221 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 41

Conread position: 55-327
Cow position: chr1:71790193-71789929 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 31

Conread position: 56-314
Cow position: chr1:33998714-33998959 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 25

Conread position: 57-350
Cow position: chr1:77739675-77739969 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 73

Conread position: 58-310
Cow position: chr1:62997756-62998007 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 114, 23

Conread position: 60-321
Cow position: chr1:82537896-82538144 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 113, 23

Conread position: 60-328
Cow position: chr1:13157148-13157418 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 21

Conread position: 62-334
Cow position: chr1:59020623-59020898 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 19

Conread position: 63-284
Cow position: chr1:33775682-33775457 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 65

Conread position: 64-272
Cow position: chr1:83606489-83606280 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 36

Conread position: 64-310
Cow position: chr1:89158736-89158503 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 17

Conread position: 64-320
Cow position: chr1:67654359-67654110 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 64-342
Cow position: chr1:528107-527846 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 21

Conread position: 68-312
Cow position: chr1:76037549-76037304 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 13

Conread position: 68-323
Cow position: chr1:81858937-81858683 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 46

Conread position: 69-314
Cow position: chr1:98421965-98422213 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 59

Conread position: 69-324
Cow position: chr1:22637463-22637205 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 138

Conread position: 70-221
Cow position: chr1:83618638-83618486 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 97, 10

Conread position: 70-306
Cow position: chr1:41027043-41027273 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 104, 58

Conread position: 70-310
Cow position: chr1:73719430-73719676 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 17

Conread position: 70-312
Cow position: chr1:30035186-30035433 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 10

Conread position: 70-328
Cow position: chr1:16061036-16060785 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 61

Conread position: 70-328
Cow position: chr1:47658313-47658568 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 58

Conread position: 70-328
Cow position: chr1:81515202-81515461 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 102, 13

Conread position: 70-341
Cow position: chr1:852138-852412 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 104, 58

Conread position: 70-350
Cow position: chr1:96019199-96019482 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 13

Conread position: 71-351
Cow position: chr1:83092843-83093107 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 53

Conread position: 73-251
Cow position: chr1:78068098-78067923 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 42

Conread position: 73-306
Cow position: chr1:49980681-49980909 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 55

Conread position: 73-306
Cow position: chr1:86057104-86056877 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 58

Conread position: 73-323
Cow position: chr1:6731153-6731398 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 101, 10

Conread position: 73-326
Cow position: chr1:5751284-5751534 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 101, 55

Conread position: 73-330
Cow position: chr1:22192740-22192995 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 104, 57

Conread position: 73-331
Cow position: chr1:6590005-6590265 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 102, 21

Conread position: 73-338
Cow position: chr1:92523985-92524251 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 101, 50

Conread position: 73-340
Cow position: chr1:31347963-31347698 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 39

Conread position: 74-330
Cow position: chr1:5010867-5010608 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 22

Conread position: 74-331
Cow position: chr1:98911979-98912234 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 49

Conread position: 74-334
Cow position: chr1:78794259-78794005 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 36

Conread position: 74-339
Cow position: chr1:98897723-98897459 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 55

Conread position: 75-321
Cow position: chr1:20950688-20950933 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 6, 45

Conread position: 75-327
Cow position: chr1:12222636-12222383 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 57

Conread position: 75-335
Cow position: chr1:36998158-36998410 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 36

Conread position: 76-310
Cow position: chr1:22730708-22730938 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 34

Conread position: 76-332
Cow position: chr1:101177489-101177751 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 52

Conread position: 76-333
Cow position: chr1:97144489-97144242 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 12

Conread position: 76-341
Cow position: chr1:14759387-14759119 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 131

Conread position: 77-323
Cow position: chr1:8287655-8287411 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 97, 36

Conread position: 77-323
Cow position: chr1:31795030-31794789 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 46

Conread position: 77-325
Cow position: chr1:83025189-83024950 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 95, 51

Conread position: 77-338
Cow position: chr1:48581104-48581362 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 51

Conread position: 77-338
Cow position: chr1:67919110-67919361 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 52

Conread position: 78-294
Cow position: chr1:62034852-62034646 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 133, 50

Conread position: 78-326
Cow position: chr1:57087817-57088072 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 102

Conread position: 79-265
Cow position: chr1:19962028-19962209 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 5, 54

Conread position: 79-324
Cow position: chr1:102768154-102768396 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 53

Conread position: 79-347
Cow position: chr1:46030384-46030121 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 49

Conread position: 79-351
Cow position: chr1:46245772-46245487 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 111

Conread position: 80-244
Cow position: chr1:8670751-8670914 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 48

Conread position: 80-299
Cow position: chr1:61011159-61011369 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 43

Conread position: 80-306
Cow position: chr1:95618619-95618842 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 49

Conread position: 80-331
Cow position: chr1:4444863-4444614 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 94, 12

Conread position: 80-336
Cow position: chr1:55753237-55752988 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 40

Conread position: 80-336
Cow position: chr1:93590608-93590361 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 94, 48

Conread position: 81-306
Cow position: chr1:73721339-73721565 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 93, 47

Conread position: 81-310
Cow position: chr1:66752650-66752427 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 49

Conread position: 81-314
Cow position: chr1:27959571-27959338 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 47

Conread position: 81-314
Cow position: chr1:63530537-63530770 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 47

Conread position: 81-321
Cow position: chr1:99221372-99221126 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 34

Conread position: 81-322
Cow position: chr1:87095235-87094996 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 93, 47

Conread position: 81-327
Cow position: chr1:42887298-42887060 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 40

Conread position: 81-327
Cow position: chr1:100823016-100823262 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 50

Conread position: 81-328
Cow position: chr1:84104082-84103832 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 60

Conread position: 81-332
Cow position: chr1:15206893-15206651 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 146, 47

Conread position: 81-333
Cow position: chr1:7748192-7748444 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 47

Conread position: 81-333
Cow position: chr1:7752358-7752608 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 47

Conread position: 81-333
Cow position: chr1:95835819-95835564 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 42

Conread position: 81-340
Cow position: chr1:72422429-72422168 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 131, 47

Conread position: 81-341
Cow position: chr1:21560991-21561253 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 93, 47

Conread position: 81-349
Cow position: chr1:67529034-67529300 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 34

Conread position: 81-351
Cow position: chr1:38706875-38706608 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 47

Conread position: 82-306
Cow position: chr1:63078990-63079202 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 46

Conread position: 82-321
Cow position: chr1:17055974-17056206 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 46

Conread position: 82-323
Cow position: chr1:24530482-24530716 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 92, 27

Conread position: 82-326
Cow position: chr1:20871579-20871334 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 91, 45

Conread position: 82-345
Cow position: chr1:43148568-43148300 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 20

Conread position: 83-263
Cow position: chr1:52487999-52487820 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 45

Conread position: 83-291
Cow position: chr1:1053562-1053768 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 45

Conread position: 83-328
Cow position: chr1:75411858-75411609 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 46

Conread position: 83-335
Cow position: chr1:49334411-49334158 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 45

Conread position: 84-309
Cow position: chr1:51860579-51860360 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 17

Conread position: 84-310
Cow position: chr1:14006098-14006330 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 135

Conread position: 84-310
Cow position: chr1:72092641-72092418 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 25

Conread position: 84-331
Cow position: chr1:53452519-53452747 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 84-337
Cow position: chr1:872139-871883 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 200

Conread position: 84-340
Cow position: chr1:73020680-73020429 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 44

Conread position: 85-310
Cow position: chr1:102648261-102648485 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 43

Conread position: 85-327
Cow position: chr1:85688161-85688404 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 127, 43

Conread position: 86-245
Cow position: chr1:3417332-3417496 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 145

Conread position: 86-326
Cow position: chr1:45315652-45315410 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 42

Conread position: 86-335
Cow position: chr1:242541-242781 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 42

Conread position: 88-336
Cow position: chr1:759432-759181 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 35

Conread position: 91-291
Cow position: chr1:6031613-6031814 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 38

Conread position: 91-306
Cow position: chr1:6381761-6381977 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 37

Conread position: 91-311
Cow position: chr1:6790764-6790980 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 35

Conread position: 91-323
Cow position: chr1:36688389-36688161 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 83, 34

Conread position: 92-216
Cow position: chr1:52429670-52429547 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 34

Conread position: 92-287
Cow position: chr1:22461248-22461057 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 36

Conread position: 92-310
Cow position: chr1:33846579-33846365 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 38

Conread position: 92-323
Cow position: chr1:68688573-68688797 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 83, 36

Conread position: 93-306
Cow position: chr1:101439491-101439288 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 35

Conread position: 93-337
Cow position: chr1:14567644-14567406 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 44

Conread position: 94-340
Cow position: chr1:41138152-41137908 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 33

Conread position: 94-343
Cow position: chr1:4582543-4582790 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 80, 35

Conread position: 95-242
Cow position: chr1:64019528-64019381 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 33

Conread position: 95-244
Cow position: chr1:97750626-97750479 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 33

Conread position: 95-294
Cow position: chr1:101280741-101280548 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 17

Conread position: 96-321
Cow position: chr1:11489167-11488941 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 29

Conread position: 97-310
Cow position: chr1:99605192-99604987 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 77, 31

Conread position: 97-343
Cow position: chr1:40212337-40212110 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 31

Conread position: 98-322
Cow position: chr1:100852705-100852919 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 76, 25

Conread position: 99-244
Cow position: chr1:83783933-83783791 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 29

Conread position: 99-320
Cow position: chr1:95156967-95156748 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 31

Conread position: 102-306
Cow position: chr1:100573627-100573427 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 26

Conread position: 103-328
Cow position: chr1:731975-731750 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 185

Conread position: 106-290
Cow position: chr1:7305968-7306154 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 125

Conread position: 106-321
Cow position: chr1:30948996-30949196 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 17

Conread position: 108-323
Cow position: chr1:67291157-67291377 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 101, 6

Conread position: 108-333
Cow position: chr1:70483328-70483107 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 66, 15

Conread position: 110-321
Cow position: chr1:98380289-98380078 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 18

Conread position: 110-327
Cow position: chr1:34001051-34001265 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 36

Conread position: 110-331
Cow position: chr1:98557113-98556893 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 18

Conread position: 110-341
Cow position: chr1:20537211-20537441 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 12

Conread position: 112-304
Cow position: chr1:69691709-69691512 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 112-322
Cow position: chr1:50765618-50765832 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 36

Conread position: 112-323
Cow position: chr1:30469789-30470002 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 5

Conread position: 112-326
Cow position: chr1:97540641-97540858 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 93

Conread position: 112-335
Cow position: chr1:7442982-7443211 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 208

Conread position: 112-349
Cow position: chr1:1496526-1496283 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 113-291
Cow position: chr1:31630280-31630097 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 113-310
Cow position: chr1:100800762-100800564 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 125

Conread position: 113-331
Cow position: chr1:95152878-95153102 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 113-341
Cow position: chr1:1489393-1489169 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 12

Conread position: 114-308
Cow position: chr1:78030024-78029823 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 115-310
Cow position: chr1:81638559-81638744 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 10

Conread position: 115-315
Cow position: chr1:98742030-98742226 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 11, 57

Conread position: 115-323
Cow position: chr1:76474547-76474341 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 91

Conread position: 115-338
Cow position: chr1:94713155-94712927 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 103

Conread position: 115-343
Cow position: chr1:31256215-31255992 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 10

Conread position: 117-331
Cow position: chr1:62469073-62469283 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 57, 35

Conread position: 119-321
Cow position: chr1:4362043-4361836 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 121-328
Cow position: chr1:98605688-98605481 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 47

Conread position: 121-338
Cow position: chr1:98415603-98415826 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 83

Conread position: 122-253
Cow position: chr1:36578535-36578666 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 40

Conread position: 122-336
Cow position: chr1:11709001-11708796 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 86

Conread position: 123-312
Cow position: chr1:4329882-4329701 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 22

Conread position: 123-330
Cow position: chr1:101883376-101883163 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 124-263
Cow position: chr1:50329514-50329655 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 25

Conread position: 124-294
Cow position: chr1:61134430-61134604 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 124-304
Cow position: chr1:69940804-69940626 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 112

Conread position: 124-309
Cow position: chr1:73551491-73551298 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 124-310
Cow position: chr1:32035691-32035509 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 106

Conread position: 124-310
Cow position: chr1:32217261-32217443 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 42

Conread position: 124-310
Cow position: chr1:50585859-50585671 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 108

Conread position: 124-310
Cow position: chr1:87149796-87149611 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 49, 105

Conread position: 124-311
Cow position: chr1:94823373-94823183 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 124-318
Cow position: chr1:46172624-46172818 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 150

Conread position: 124-322
Cow position: chr1:524827-525024 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 96

Conread position: 124-322
Cow position: chr1:4294363-4294565 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 145

Conread position: 124-322
Cow position: chr1:39684125-39683925 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 64

Conread position: 124-322
Cow position: chr1:77685962-77685763 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 190

Conread position: 124-322
Cow position: chr1:96558830-96558629 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 124-323
Cow position: chr1:87888408-87888609 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 21

Conread position: 124-324
Cow position: chr1:32014215-32014414 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 105

Conread position: 124-325
Cow position: chr1:25022056-25021859 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 105

Conread position: 124-327
Cow position: chr1:83004672-83004887 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 25

Conread position: 124-327
Cow position: chr1:89298091-89297885 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 57

Conread position: 124-327
Cow position: chr1:89301700-89301494 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 57

Conread position: 124-328
Cow position: chr1:1380016-1380227 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 124-329
Cow position: chr1:55685959-55685755 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 106

Conread position: 124-329
Cow position: chr1:63994536-63994331 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 92

Conread position: 124-330
Cow position: chr1:49297670-49297876 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 51, 119

Conread position: 124-331
Cow position: chr1:71946065-71945854 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 155

Conread position: 124-334
Cow position: chr1:70416741-70416531 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 119

Conread position: 124-334
Cow position: chr1:81473174-81473387 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 76

Conread position: 124-334
Cow position: chr1:102523622-102523412 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 48, 63

Conread position: 124-336
Cow position: chr1:46939866-46939643 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 124-337
Cow position: chr1:89437698-89437493 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 7

Conread position: 124-339
Cow position: chr1:24656264-24656491 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 88

Conread position: 124-348
Cow position: chr1:83677305-83677081 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 76

Conread position: 124-350
Cow position: chr1:102730743-102730509 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 125-305
Cow position: chr1:53651007-53651179 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 63

Conread position: 125-321
Cow position: chr1:42774930-42775122 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 112

Conread position: 126-300
Cow position: chr1:78034883-78034710 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 60

Conread position: 127-274
Cow position: chr1:67539583-67539729 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 9

Conread position: 127-281
Cow position: chr1:70146889-70146732 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 127-291
Cow position: chr1:23372881-23373047 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 127-294
Cow position: chr1:101525903-101525731 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 61

Conread position: 127-301
Cow position: chr1:40181603-40181425 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 127-307
Cow position: chr1:96201294-96201113 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 66

Conread position: 127-308
Cow position: chr1:68710300-68710487 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 127-309
Cow position: chr1:60603555-60603366 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 127-310
Cow position: chr1:54569720-54569906 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 127-320
Cow position: chr1:23180116-23180321 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 162

Conread position: 127-321
Cow position: chr1:74919957-74919758 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 127-322
Cow position: chr1:22828548-22828357 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 99

Conread position: 127-322
Cow position: chr1:29329563-29329761 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 190

Conread position: 127-322
Cow position: chr1:50853929-50854129 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 8

Conread position: 127-323
Cow position: chr1:64457987-64458191 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 127-325
Cow position: chr1:15875682-15875877 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 77

Conread position: 127-326
Cow position: chr1:48301429-48301229 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 117

Conread position: 127-327
Cow position: chr1:60403788-60403991 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 127-334
Cow position: chr1:3244233-3244440 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 188

Conread position: 127-334
Cow position: chr1:69378577-69378368 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 127-334
Cow position: chr1:91743437-91743240 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 23

Conread position: 128-278
Cow position: chr1:6229971-6230120 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 99

Conread position: 128-291
Cow position: chr1:1802190-1802356 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 130-279
Cow position: chr1:73494571-73494417 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 130-294
Cow position: chr1:4573748-4573914 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 130-306
Cow position: chr1:20125817-20125996 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 82, 60

Conread position: 130-308
Cow position: chr1:29671199-29671017 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 156

Conread position: 130-311
Cow position: chr1:84594913-84595097 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 130-319
Cow position: chr1:63460903-63461092 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 89

Conread position: 130-324
Cow position: chr1:100512922-100513113 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 19

Conread position: 130-326
Cow position: chr1:67674578-67674387 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 70

Conread position: 130-326
Cow position: chr1:70044380-70044568 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 11

Conread position: 130-328
Cow position: chr1:31801895-31801695 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 75

Conread position: 130-328
Cow position: chr1:76518447-76518647 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 70

Conread position: 130-332
Cow position: chr1:84815154-84815361 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 176

Conread position: 130-336
Cow position: chr1:10523726-10523928 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 18

Conread position: 130-343
Cow position: chr1:38544227-38544005 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 19

Conread position: 130-346
Cow position: chr1:3679493-3679287 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 22

Conread position: 131-310
Cow position: chr1:5872753-5872569 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 131-310
Cow position: chr1:19599335-19599155 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 111

Conread position: 131-317
Cow position: chr1:90820451-90820268 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 26

Conread position: 131-322
Cow position: chr1:31340745-31340550 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 131-322
Cow position: chr1:102797972-102797782 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 14

Conread position: 131-323
Cow position: chr1:78782000-78782208 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 131-332
Cow position: chr1:69411671-69411469 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 139

Conread position: 132-321
Cow position: chr1:85622556-85622745 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 183

Conread position: 132-334
Cow position: chr1:81471382-81471581 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 99

Conread position: 132-341
Cow position: chr1:64811263-64811472 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 20

Conread position: 133-330
Cow position: chr1:73534613-73534416 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 156

Conread position: 133-342
Cow position: chr1:79178656-79178868 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 133-345
Cow position: chr1:9637057-9637274 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 72

Conread position: 134-325
Cow position: chr1:77810731-77810543 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 13, 96

Conread position: 136-330
Cow position: chr1:72070083-72069881 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 168

Conread position: 137-307
Cow position: chr1:42404167-42404351 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 138-310
Cow position: chr1:46354406-46354235 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 89

Conread position: 139-329
Cow position: chr1:3666997-3666804 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 140-284
Cow position: chr1:78368508-78368368 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 140-351
Cow position: chr1:71664862-71664647 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 141-325
Cow position: chr1:84787306-84787480 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 85

Conread position: 141-329
Cow position: chr1:64887475-64887285 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 141-337
Cow position: chr1:41022455-41022650 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 88

Conread position: 141-340
Cow position: chr1:68730037-68730239 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 9

Conread position: 141-343
Cow position: chr1:82917439-82917245 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 124

Conread position: 141-346
Cow position: chr1:7452945-7453157 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 141-351
Cow position: chr1:101789057-101788850 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 86

Conread position: 142-318
Cow position: chr1:44321561-44321384 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 62

Conread position: 142-328
Cow position: chr1:83642036-83641841 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 7

Conread position: 142-344
Cow position: chr1:19384419-19384217 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 87

Conread position: 144-349
Cow position: chr1:75227281-75227081 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 85

Conread position: 145-327
Cow position: chr1:79170113-79169932 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 140

Conread position: 145-333
Cow position: chr1:51968577-51968753 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 82

Conread position: 145-333
Cow position: chr1:53456851-53457039 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 24

Conread position: 146-310
Cow position: chr1:10470467-10470627 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 67

Conread position: 146-326
Cow position: chr1:69442477-69442294 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 146-330
Cow position: chr1:42796918-42797109 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 81

Conread position: 146-337
Cow position: chr1:709859-709671 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 66, 30

Conread position: 147-337
Cow position: chr1:99637212-99637019 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 147-347
Cow position: chr1:59551479-59551684 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 148-346
Cow position: chr1:3034156-3033967 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 80

Conread position: 149-310
Cow position: chr1:53474200-53474353 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 149-317
Cow position: chr1:7965890-7966059 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 99

Conread position: 149-329
Cow position: chr1:3130505-3130325 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 120

Conread position: 149-334
Cow position: chr1:55110536-55110731 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 149-340
Cow position: chr1:36018739-36018552 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 109

Conread position: 149-342
Cow position: chr1:25955939-25956135 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 78

Conread position: 149-351
Cow position: chr1:37470545-37470738 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 10

Conread position: 150-317
Cow position: chr1:2523008-2523177 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 15

Conread position: 150-320
Cow position: chr1:26984054-26984228 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 150-328
Cow position: chr1:53394119-53394297 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 28

Conread position: 150-331
Cow position: chr1:43379317-43379136 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 79

Conread position: 150-335
Cow position: chr1:52509720-52509535 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 10

Conread position: 150-338
Cow position: chr1:30028187-30027998 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 70

Conread position: 150-347
Cow position: chr1:46795803-46795998 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 28

Conread position: 152-333
Cow position: chr1:48447513-48447698 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 159

Conread position: 153-351
Cow position: chr1:23101723-23101922 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 76

Conread position: 154-341
Cow position: chr1:81615703-81615886 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 98

Conread position: 155-291
Cow position: chr1:99629214-99629348 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 33

Conread position: 155-321
Cow position: chr1:47190945-47190774 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 137

Conread position: 155-325
Cow position: chr1:6873861-6874035 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 49

Conread position: 155-326
Cow position: chr1:36887277-36887110 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 78

Conread position: 155-335
Cow position: chr1:5284182-5283998 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 163

Conread position: 157-331
Cow position: chr1:99031927-99031750 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 17, 71

Conread position: 160-322
Cow position: chr1:90192471-90192636 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 156

Conread position: 160-324
Cow position: chr1:80385432-80385266 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 58

Conread position: 160-329
Cow position: chr1:80423677-80423508 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 70

Conread position: 160-330
Cow position: chr1:95976388-95976559 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 70

Conread position: 160-351
Cow position: chr1:31274935-31274742 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 155

Conread position: 161-331
Cow position: chr1:48695493-48695321 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 45

Conread position: 161-341
Cow position: chr1:66445018-66445192 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 68

Conread position: 161-347
Cow position: chr1:12090400-12090587 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 118

Conread position: 162-324
Cow position: chr1:83246482-83246646 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 12, 153

Conread position: 164-294
Cow position: chr1:1799089-1799221 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 164-312
Cow position: chr1:716528-716378 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 164-334
Cow position: chr1:50906621-50906452 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 65

Conread position: 168-323
Cow position: chr1:14067380-14067224 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 61

Conread position: 169-324
Cow position: chr1:67177963-67178123 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 169-344
Cow position: chr1:39095552-39095724 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 72

Conread position: 170-330
Cow position: chr1:3535136-3535293 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 170-344
Cow position: chr1:79038178-79038354 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 29

Conread position: 171-351
Cow position: chr1:95829066-95828888 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 68

Conread position: 172-328
Cow position: chr1:59519120-59519273 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 31

Conread position: 173-310
Cow position: chr1:44814601-44814458 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 173-317
Cow position: chr1:70476682-70476541 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 173-319
Cow position: chr1:76222653-76222503 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 173-322
Cow position: chr1:41953933-41953780 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 173-324
Cow position: chr1:2935225-2935384 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 173-324
Cow position: chr1:46294522-46294380 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 173-325
Cow position: chr1:97321985-97321824 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 15

Conread position: 173-333
Cow position: chr1:1915958-1915800 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 26

Conread position: 173-335
Cow position: chr1:45233060-45233212 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 173-337
Cow position: chr1:64705968-64706132 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 142

Conread position: 173-338
Cow position: chr1:83222053-83222221 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 107

Conread position: 173-339
Cow position: chr1:3271214-3271378 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 133

Conread position: 173-340
Cow position: chr1:89146806-89146640 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 141

Conread position: 173-342
Cow position: chr1:65160197-65160365 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 12

Conread position: 173-343
Cow position: chr1:89213284-89213112 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 32

Conread position: 173-345
Cow position: chr1:67160221-67160050 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 35

Conread position: 173-345
Cow position: chr1:73398005-73397828 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 173-351
Cow position: chr1:44678366-44678561 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 175-322
Cow position: chr1:95809620-95809772 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 176-309
Cow position: chr1:61560429-61560292 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 176-310
Cow position: chr1:33080740-33080606 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 126

Conread position: 176-315
Cow position: chr1:15102955-15103094 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 52

Conread position: 176-323
Cow position: chr1:73644435-73644289 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 55

Conread position: 176-326
Cow position: chr1:6788073-6787920 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 13

Conread position: 176-331
Cow position: chr1:42592215-42592058 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 177-349
Cow position: chr1:101855950-101855786 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 87

Conread position: 178-311
Cow position: chr1:57395433-57395299 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 178-312
Cow position: chr1:8133997-8134133 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 178-319
Cow position: chr1:34952317-34952450 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 21

Conread position: 178-320
Cow position: chr1:45289925-45290065 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 23

Conread position: 178-331
Cow position: chr1:34767361-34767520 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 178-336
Cow position: chr1:43340560-43340398 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 49

Conread position: 178-338
Cow position: chr1:9040238-9040076 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 53, 137

Conread position: 179-294
Cow position: chr1:22394600-22394484 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 179-294
Cow position: chr1:72650490-72650372 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 179-333
Cow position: chr1:43052426-43052274 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 49

Conread position: 179-340
Cow position: chr1:91937786-91937946 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 20

Conread position: 180-284
Cow position: chr1:66693825-66693719 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 181-350
Cow position: chr1:8778258-8778094 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 47

Conread position: 182-321
Cow position: chr1:77704866-77704725 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 182-335
Cow position: chr1:99221555-99221404 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 48

Conread position: 183-349
Cow position: chr1:14106537-14106363 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 109

Conread position: 187-329
Cow position: chr1:45262635-45262493 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 42

Conread position: 190-325
Cow position: chr1:69911189-69911334 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 191-334
Cow position: chr1:20205427-20205576 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 193-335
Cow position: chr1:26447835-26447975 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 59

Conread position: 193-351
Cow position: chr1:83066742-83066583 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 49

Conread position: 195-310
Cow position: chr1:93960069-93959957 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 33

Conread position: 195-321
Cow position: chr1:87989100-87988977 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 33

Conread position: 197-325
Cow position: chr1:51292238-51292361 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 31

Conread position: 198-351
Cow position: chr1:67346243-67346403 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 86

Conread position: 199-323
Cow position: chr1:84813125-84813249 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 19

Conread position: 206-311
Cow position: chr1:80312150-80312042 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 207-343
Cow position: chr1:1897011-1896874 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 102

Conread position: 208-348
Cow position: chr1:52429459-52429315 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 208-351
Cow position: chr1:5599014-5599160 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 209-324
Cow position: chr1:93235407-93235291 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 15

Conread position: 209-346
Cow position: chr1:60367181-60367043 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 213-340
Cow position: chr1:92384425-92384552 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 215-349
Cow position: chr1:12390373-12390241 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 68

Conread position: 221-351
Cow position: chr1:96609148-96609277 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 230-320
Cow position: chr1:89341830-89341740 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 236-347
Cow position: chr1:5407001-5406889 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.