Cow genome map

Conread name: rece02_c23.y1

Conread position: 1-251
Cow position:
Alignm length: 252
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 33

Conread position: 2-293
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 3-270
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 53, 31

Conread position: 4-324
Cow position:
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 5-152
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 47

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 43

Conread position: 5-324
Cow position:
Alignm length: 321
Alignm identity: 213
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 68, 47

Conread position: 5-324
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 145

Conread position: 5-324
Cow position:
Alignm length: 329
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 35

Conread position: 9-285
Cow position:
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 14-323
Cow position:
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 27

Conread position: 15-329
Cow position:
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 55

Conread position: 17-324
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 38

Conread position: 17-329
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 34

Conread position: 20-303
Cow position:
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 24-329
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 20

Conread position: 27-323
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 58

Conread position: 29-324
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 112

Conread position: 35-269
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 105

Conread position: 36-323
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 25

Conread position: 44-324
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 100

Conread position: 50-324
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 74

Conread position: 56-251
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 84, 0

Conread position: 56-324
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 59

Conread position: 60-324
Cow position:
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 60-324
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 186, 80

Conread position: 60-324
Cow position:
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 60-324
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 188, 82

Conread position: 60-329
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 184, 31

Conread position: 63-324
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 81

Conread position: 70-323
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 183, 46

Conread position: 70-324
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 177, 69

Conread position: 71-324
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 176, 68

Conread position: 73-322
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 68

Conread position: 73-323
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 175, 18

Conread position: 73-323
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 177, 14

Conread position: 73-324
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 174, 68

Conread position: 73-324
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 175, 68

Conread position: 75-328
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 178, 15

Conread position: 76-322
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 65

Conread position: 76-324
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 77-301
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 176, 46

Conread position: 83-324
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 62

Conread position: 84-320
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 57

Conread position: 84-323
Cow position:
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 59

Conread position: 85-324
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 162, 54

Conread position: 90-324
Cow position:
Alignm length: 236
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 166, 51

Conread position: 97-324
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 44

Conread position: 97-325
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 46

Conread position: 98-324
Cow position:
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 99-323
Cow position:
Alignm length: 233
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 42

Conread position: 99-323
Cow position:
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-323
Cow position:
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position:
Alignm length: 232
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 100-309
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 88, 40

Conread position: 100-324
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 101-254
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 40

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 104-323
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 142, 28

Conread position: 104-324
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 139, 37

Conread position: 104-324
Cow position:
Alignm length: 227
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 37

Conread position: 105-251
Cow position:
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 38

Conread position: 105-324
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 11, 37

Conread position: 105-324
Cow position:
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 38

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 105-324
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 142, 36

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 37

Conread position: 105-325
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 111-324
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 135, 30

Conread position: 111-324
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 30

Conread position: 112-322
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 138, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 33

Conread position: 112-324
Cow position:
Alignm length: 221
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 27

Conread position: 112-329
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 29

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 116-324
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 155, 25

Conread position: 116-324
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 25

Conread position: 118-229
Cow position:
Alignm length: 112
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 118-314
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 23

Conread position: 118-320
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 132, 23

Conread position: 118-320
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 23

Conread position: 118-321
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 153, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 132, 21

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 136, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 21

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position:
Alignm length: 215
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 119-323
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 23

Conread position: 120-324
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 123, 21

Conread position: 121-324
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 20

Conread position: 121-324
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 126, 20

Conread position: 125-324
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 125, 16

Conread position: 125-324
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 125, 16

Conread position: 128-319
Cow position:
Alignm length: 199
Alignm identity: 160
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 13

Conread position: 128-324
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 119, 11

Conread position: 134-321
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 136-324
Cow position:
Alignm length: 196
Alignm identity: 155
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 0

Conread position: 141-319
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 85

Conread position: 147-329
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 103, 51

Show alignments to all cow chromosomes.