Cow genome map
| Conread name: | rece02_c23.y1 |
| Conread position: | 3-323 |
| Cow position: | chr12:15950915-15951227 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 18-324 |
| Cow position: | chr12:34854467-34854765 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 44-320 |
| Cow position: | chr12:18501344-18501079 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 226, 55 |
| Conread position: | 60-323 |
| Cow position: | chr12:2838561-2838821 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 187, 7 |
| Conread position: | 63-323 |
| Cow position: | chr12:8311486-8311214 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 69-324 |
| Cow position: | chr12:28765727-28765987 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 181, 72 |
| Conread position: | 78-301 |
| Cow position: | chr12:5861436-5861209 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 98-324 |
| Cow position: | chr12:21254393-21254624 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 99-324 |
| Cow position: | chr12:3361166-3360936 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 99-324 |
| Cow position: | chr12:21902202-21901972 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 99-324 |
| Cow position: | chr12:32653806-32653576 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 149, 42 |
| Conread position: | 99-324 |
| Cow position: | chr12:37558818-37558587 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 42 |
| Conread position: | 99-324 |
| Cow position: | chr12:43031123-43031351 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 42 |
| Conread position: | 104-320 |
| Cow position: | chr12:2282803-2282582 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 104-324 |
| Cow position: | chr12:3056-2831 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 104-324 |
| Cow position: | chr12:21942026-21941797 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 105-324 |
| Cow position: | chr12:45261880-45261648 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 105-325 |
| Cow position: | chr12:22332881-22332656 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 112-324 |
| Cow position: | chr12:21426943-21426726 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 33 |
| Conread position: | 112-324 |
| Cow position: | chr12:33986411-33986194 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 118-324 |
| Cow position: | chr12:251815-252024 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:1402733-1402523 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:6406408-6406616 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 132, 24 |
| Conread position: | 118-324 |
| Cow position: | chr12:8677878-8678090 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:11098485-11098274 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:14662390-14662601 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 128, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:22205505-22205714 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:25100818-25101029 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:27932702-27932913 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-324 |
| Cow position: | chr12:42859584-42859795 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 141-325 |
| Cow position: | chr12:26946763-26946961 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 189-324 |
| Cow position: | chr12:21207868-21207726 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.