Cow genome map
Conread name: | rece02_c23.y1 |
Conread position: | 2-330 |
Cow position: | chr18:54270028-54269706 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 231 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 81, 46 |
Conread position: | 3-251 |
Cow position: | chr18:56462458-56462695 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 3-324 |
Cow position: | chr18:29237259-29236937 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 42 |
Conread position: | 3-324 |
Cow position: | chr18:54171413-54171733 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 42 |
Conread position: | 5-324 |
Cow position: | chr18:2886572-2886894 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 40 |
Conread position: | 17-328 |
Cow position: | chr18:16842904-16843213 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 28 |
Conread position: | 60-324 |
Cow position: | chr18:46877613-46877881 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 190 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 35, 22 |
Conread position: | 63-221 |
Cow position: | chr18:1521541-1521382 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 12, 81 |
Conread position: | 69-324 |
Cow position: | chr18:33336252-33335994 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 75 |
Conread position: | 73-323 |
Cow position: | chr18:27987446-27987188 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 186 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 73, 59 |
Conread position: | 77-324 |
Cow position: | chr18:53786218-53785963 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 193 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 10, 66 |
Conread position: | 90-329 |
Cow position: | chr18:44601880-44601641 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 180 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 23 |
Conread position: | 98-324 |
Cow position: | chr18:35335837-35335606 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 43 |
Conread position: | 99-308 |
Cow position: | chr18:51462722-51462935 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 172 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-323 |
Cow position: | chr18:47742375-47742146 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-324 |
Cow position: | chr18:11274749-11274979 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-324 |
Cow position: | chr18:24040375-24040606 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 46 |
Conread position: | 99-324 |
Cow position: | chr18:33359222-33358994 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 42 |
Conread position: | 99-324 |
Cow position: | chr18:51342043-51341813 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 42 |
Conread position: | 101-324 |
Cow position: | chr18:39748932-39748705 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 40 |
Conread position: | 104-324 |
Cow position: | chr18:2019335-2019559 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 179 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 143, 30 |
Conread position: | 104-324 |
Cow position: | chr18:19539233-19539453 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 171 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 144, 37 |
Conread position: | 105-303 |
Cow position: | chr18:17992069-17992273 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 163 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 7, 37 |
Conread position: | 105-324 |
Cow position: | chr18:6868907-6869132 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 37 |
Conread position: | 105-324 |
Cow position: | chr18:43146574-43146799 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 35 |
Conread position: | 105-324 |
Cow position: | chr18:47719232-47719457 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 37 |
Conread position: | 105-324 |
Cow position: | chr18:48222230-48222006 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 37 |
Conread position: | 111-324 |
Cow position: | chr18:23944030-23944248 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 174 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 137, 30 |
Conread position: | 111-324 |
Cow position: | chr18:51258328-51258110 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 171 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 139, 30 |
Conread position: | 111-324 |
Cow position: | chr18:51310928-51310712 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 173 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 137, 30 |
Conread position: | 112-324 |
Cow position: | chr18:22602831-22602614 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-324 |
Cow position: | chr18:33953231-33953442 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 170 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-324 |
Cow position: | chr18:51689968-51689751 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-324 |
Cow position: | chr18:55088581-55088798 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-325 |
Cow position: | chr18:16534322-16534104 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 169 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 136, 29 |
Conread position: | 118-323 |
Cow position: | chr18:52651257-52651048 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 168 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr18:14130722-14130511 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 170 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr18:14416313-14416103 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 23 |
Conread position: | 118-324 |
Cow position: | chr18:23797985-23797774 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr18:28973565-28973776 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 23 |
Conread position: | 118-324 |
Cow position: | chr18:36508670-36508459 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr18:37505401-37505190 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 172 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr18:40478720-40478510 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 168 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr18:41840487-41840698 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr18:51481177-51480966 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 167 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-329 |
Cow position: | chr18:27837979-27838194 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 173 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 119-324 |
Cow position: | chr18:19352722-19352512 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 22 |
Conread position: | 141-324 |
Cow position: | chr18:114706-114518 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 148 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 109, 81 |
Conread position: | 153-324 |
Cow position: | chr18:18089171-18089346 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 99, 17 |
Conread position: | 176-324 |
Cow position: | chr18:54024078-54024233 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 125 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 178-324 |
Cow position: | chr18:32652499-32652346 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 123 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 189-324 |
Cow position: | chr18:25350934-25350792 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.