Cow genome map

Conread name: rece02_c23.y1

Conread position: 2-330
Cow position: chr18:54270028-54269706 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 81, 46

Conread position: 3-251
Cow position: chr18:56462458-56462695 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 3-324
Cow position: chr18:29237259-29236937 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 42

Conread position: 3-324
Cow position: chr18:54171413-54171733 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 5-324
Cow position: chr18:2886572-2886894 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 40

Conread position: 17-328
Cow position: chr18:16842904-16843213 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 28

Conread position: 60-324
Cow position: chr18:46877613-46877881 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 22

Conread position: 63-221
Cow position: chr18:1521541-1521382 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 81

Conread position: 69-324
Cow position: chr18:33336252-33335994 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 75

Conread position: 73-323
Cow position: chr18:27987446-27987188 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 59

Conread position: 77-324
Cow position: chr18:53786218-53785963 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 10, 66

Conread position: 90-329
Cow position: chr18:44601880-44601641 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 23

Conread position: 98-324
Cow position: chr18:35335837-35335606 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 99-308
Cow position: chr18:51462722-51462935 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 148, 42

Conread position: 99-323
Cow position: chr18:47742375-47742146 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chr18:11274749-11274979 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chr18:24040375-24040606 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 46

Conread position: 99-324
Cow position: chr18:33359222-33358994 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position: chr18:51342043-51341813 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 101-324
Cow position: chr18:39748932-39748705 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 40

Conread position: 104-324
Cow position: chr18:2019335-2019559 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 143, 30

Conread position: 104-324
Cow position: chr18:19539233-19539453 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 144, 37

Conread position: 105-303
Cow position: chr18:17992069-17992273 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position: chr18:6868907-6869132 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position: chr18:43146574-43146799 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 105-324
Cow position: chr18:47719232-47719457 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position: chr18:48222230-48222006 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 111-324
Cow position: chr18:23944030-23944248 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 30

Conread position: 111-324
Cow position: chr18:51258328-51258110 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 139, 30

Conread position: 111-324
Cow position: chr18:51310928-51310712 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 137, 30

Conread position: 112-324
Cow position: chr18:22602831-22602614 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chr18:33953231-33953442 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chr18:51689968-51689751 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chr18:55088581-55088798 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-325
Cow position: chr18:16534322-16534104 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 136, 29

Conread position: 118-323
Cow position: chr18:52651257-52651048 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr18:14130722-14130511 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr18:14416313-14416103 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position: chr18:23797985-23797774 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr18:28973565-28973776 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position: chr18:36508670-36508459 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr18:37505401-37505190 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr18:40478720-40478510 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr18:41840487-41840698 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr18:51481177-51480966 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 132, 23

Conread position: 118-329
Cow position: chr18:27837979-27838194 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 43, 23

Conread position: 119-324
Cow position: chr18:19352722-19352512 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 141-324
Cow position: chr18:114706-114518 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 81

Conread position: 153-324
Cow position: chr18:18089171-18089346 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 17

Conread position: 176-324
Cow position: chr18:54024078-54024233 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 178-324
Cow position: chr18:32652499-32652346 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 189-324
Cow position: chr18:25350934-25350792 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.