Cow genome map
| Conread name: | rece02_c23.y1 |
| Conread position: | 2-130 |
| Cow position: | chr19:44532568-44532442 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 3-241 |
| Cow position: | chr19:43139-42906 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 3-324 |
| Cow position: | chr19:352527-352862 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 3-324 |
| Cow position: | chr19:42249257-42248937 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 4-324 |
| Cow position: | chr19:35377231-35376918 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 31 |
| Conread position: | 5-321 |
| Cow position: | chr19:377461-377770 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 5-322 |
| Cow position: | chr19:42648664-42648979 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 6-329 |
| Cow position: | chr19:15954285-15953979 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 9-319 |
| Cow position: | chr19:32223000-32223309 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 42-236 |
| Cow position: | chr19:27052431-27052622 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 50-324 |
| Cow position: | chr19:6554006-6553733 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 60-324 |
| Cow position: | chr19:32211669-32211942 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 64-324 |
| Cow position: | chr19:7449632-7449892 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 73-324 |
| Cow position: | chr19:39390895-39390639 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 68 |
| Conread position: | 97-324 |
| Cow position: | chr19:772964-772730 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 98-322 |
| Cow position: | chr19:38257-38029 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 43 |
| Conread position: | 98-324 |
| Cow position: | chr19:28593625-28593412 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 99-324 |
| Cow position: | chr19:7342429-7342199 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 45 |
| Conread position: | 99-324 |
| Cow position: | chr19:43144077-43143847 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 42 |
| Conread position: | 101-298 |
| Cow position: | chr19:28376845-28376641 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 101-324 |
| Cow position: | chr19:417021-416792 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 105-324 |
| Cow position: | chr19:1032431-1032206 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 105-324 |
| Cow position: | chr19:10671951-10672175 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 36 |
| Conread position: | 105-324 |
| Cow position: | chr19:32665878-32665661 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 112-321 |
| Cow position: | chr19:170399-170612 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 136, 29 |
| Conread position: | 115-324 |
| Cow position: | chr19:20105058-20104843 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 118-287 |
| Cow position: | chr19:5729171-5728996 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 23 |
| Conread position: | 118-323 |
| Cow position: | chr19:204303-204093 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-323 |
| Cow position: | chr19:33873768-33873558 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 120, 23 |
| Conread position: | 118-323 |
| Cow position: | chr19:40852096-40852306 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr19:172553-172342 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr19:7488655-7488444 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-338 |
| Cow position: | chr19:439315-439536 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 127, 23 |
| Conread position: | 125-324 |
| Cow position: | chr19:2274043-2274247 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 141-280 |
| Cow position: | chr19:439140-439286 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 142-325 |
| Cow position: | chr19:39688847-39688659 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 144-324 |
| Cow position: | chr19:32245002-32244815 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 150-324 |
| Cow position: | chr19:40887345-40887521 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 188-324 |
| Cow position: | chr19:39546897-39546758 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.