Cow genome map
| Conread name: | rece02_c23.y1 |
| Conread position: | 1-313 |
| Cow position: | chr23:1327114-1327429 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 47 |
| Conread position: | 1-325 |
| Cow position: | chr23:29474198-29474524 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 3-222 |
| Cow position: | chr23:1402526-1402739 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 3-323 |
| Cow position: | chr23:4752344-4752029 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 5-308 |
| Cow position: | chr23:22875330-22875623 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 5-322 |
| Cow position: | chr23:38578631-38578310 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 17-254 |
| Cow position: | chr23:31650571-31650799 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 38, 124 |
| Conread position: | 25-324 |
| Cow position: | chr23:19332077-19332373 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 177, 23 |
| Conread position: | 38-324 |
| Cow position: | chr23:16615672-16615962 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 60-324 |
| Cow position: | chr23:2312932-2313204 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 63-324 |
| Cow position: | chr23:15219592-15219858 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 70-324 |
| Cow position: | chr23:6216864-6216605 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 53 |
| Conread position: | 70-324 |
| Cow position: | chr23:14974268-14974527 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 73-324 |
| Cow position: | chr23:967060-967311 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 73-324 |
| Cow position: | chr23:2757884-2757628 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 68 |
| Conread position: | 73-324 |
| Cow position: | chr23:14965462-14965716 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 174, 68 |
| Conread position: | 76-314 |
| Cow position: | chr23:2763489-2763723 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 78-324 |
| Cow position: | chr23:25683778-25684027 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 98-324 |
| Cow position: | chr23:20302477-20302247 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 38 |
| Conread position: | 99-322 |
| Cow position: | chr23:28217554-28217326 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 99-324 |
| Cow position: | chr23:19950319-19950549 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 101-322 |
| Cow position: | chr23:4277217-4276990 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 139, 40 |
| Conread position: | 101-324 |
| Cow position: | chr23:7273895-7273670 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 101-333 |
| Cow position: | chr23:8980059-8980296 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 145, 39 |
| Conread position: | 105-324 |
| Cow position: | chr23:31591543-31591769 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 111-323 |
| Cow position: | chr23:4510329-4510112 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 111-324 |
| Cow position: | chr23:5778835-5779053 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 112-324 |
| Cow position: | chr23:4360081-4359864 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 112-324 |
| Cow position: | chr23:4434707-4434494 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 112-324 |
| Cow position: | chr23:16616595-16616815 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 138, 29 |
| Conread position: | 112-324 |
| Cow position: | chr23:31447066-31446849 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 112-324 |
| Cow position: | chr23:36031121-36031339 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 118-323 |
| Cow position: | chr23:4640379-4640589 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-323 |
| Cow position: | chr23:4888918-4888710 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-323 |
| Cow position: | chr23:27399748-27399539 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 118-324 |
| Cow position: | chr23:2026874-2027085 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr23:3881460-3881671 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr23:15525855-15525644 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-324 |
| Cow position: | chr23:19489787-19489576 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 120-323 |
| Cow position: | chr23:15177314-15177110 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 130, 21 |
| Conread position: | 120-324 |
| Cow position: | chr23:30636058-30636267 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 121-324 |
| Cow position: | chr23:20155973-20156183 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 123-324 |
| Cow position: | chr23:31594996-31595202 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 132-324 |
| Cow position: | chr23:22147017-22147216 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 142-323 |
| Cow position: | chr23:2523974-2524162 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 142-324 |
| Cow position: | chr23:2782213-2782397 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 46 |
| Conread position: | 142-324 |
| Cow position: | chr23:5874559-5874740 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 105, 38 |
| Conread position: | 160-324 |
| Cow position: | chr23:3013851-3013680 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 132 |
| Conread position: | 189-324 |
| Cow position: | chr23:4816251-4816109 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.