Cow genome map
| Conread name: | rece02_c23.y1 |
| Conread position: | 2-325 |
| Cow position: | chr24:16648877-16649199 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 3-320 |
| Cow position: | chr24:12797326-12797644 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 6-338 |
| Cow position: | chr24:1447996-1447662 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 10-324 |
| Cow position: | chr24:36559651-36559966 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 11-324 |
| Cow position: | chr24:35841187-35841503 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 17-329 |
| Cow position: | chr24:12568658-12568351 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 40-324 |
| Cow position: | chr24:40654793-40654506 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 65 |
| Conread position: | 42-331 |
| Cow position: | chr24:16376925-16376662 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 44-307 |
| Cow position: | chr24:8152599-8152868 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 68-323 |
| Cow position: | chr24:6145749-6145490 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 77-324 |
| Cow position: | chr24:9091913-9092157 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 173, 64 |
| Conread position: | 82-311 |
| Cow position: | chr24:6336047-6335823 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 191, 20 |
| Conread position: | 85-320 |
| Cow position: | chr24:6537901-6537664 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 98-324 |
| Cow position: | chr24:33738989-33739217 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 99-323 |
| Cow position: | chr24:16084309-16084539 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 99-324 |
| Cow position: | chr24:6024748-6024975 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 42 |
| Conread position: | 99-324 |
| Cow position: | chr24:6084367-6084137 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 42 |
| Conread position: | 99-324 |
| Cow position: | chr24:9188382-9188611 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 148, 46 |
| Conread position: | 99-324 |
| Cow position: | chr24:13188523-13188305 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 174, 42 |
| Conread position: | 99-324 |
| Cow position: | chr24:22793522-22793293 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 42 |
| Conread position: | 99-324 |
| Cow position: | chr24:37217349-37217125 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 146, 42 |
| Conread position: | 100-324 |
| Cow position: | chr24:6434591-6434361 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 101-324 |
| Cow position: | chr24:35838272-35838496 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 40 |
| Conread position: | 102-324 |
| Cow position: | chr24:12237400-12237174 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 146, 21 |
| Conread position: | 104-215 |
| Cow position: | chr24:12130629-12130737 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 112-324 |
| Cow position: | chr24:12484980-12485197 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 112-324 |
| Cow position: | chr24:40549211-40548994 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 118-311 |
| Cow position: | chr24:19833716-19833518 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-324 |
| Cow position: | chr24:148288-148499 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr24:12086529-12086318 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr24:12335444-12335654 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr24:17696647-17696853 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 118-324 |
| Cow position: | chr24:29187614-29187403 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-324 |
| Cow position: | chr24:33933697-33933486 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 128, 23 |
| Conread position: | 121-324 |
| Cow position: | chr24:1437860-1438066 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 122-324 |
| Cow position: | chr24:4415202-4415409 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 19 |
| Conread position: | 131-324 |
| Cow position: | chr24:15392022-15392204 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 142-324 |
| Cow position: | chr24:44017855-44017666 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 160-324 |
| Cow position: | chr24:13524395-13524225 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 132 |
| Conread position: | 160-324 |
| Cow position: | chr24:22952427-22952256 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.