Cow genome map
| Conread name: | rece02_c23.y1 |
| Conread position: | 5-323 |
| Cow position: | chr25:11933132-11933450 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 5-323 |
| Cow position: | chr25:12759202-12759522 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 48 |
| Conread position: | 5-324 |
| Cow position: | chr25:18093407-18093095 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 5-324 |
| Cow position: | chr25:33244206-33243906 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 19-324 |
| Cow position: | chr25:19287962-19288262 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 229, 30 |
| Conread position: | 73-323 |
| Cow position: | chr25:8675247-8674993 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 73-324 |
| Cow position: | chr25:14016497-14016241 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 151, 68 |
| Conread position: | 73-324 |
| Cow position: | chr25:34014156-34014410 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 165, 68 |
| Conread position: | 74-323 |
| Cow position: | chr25:36240880-36240633 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 67 |
| Conread position: | 82-324 |
| Cow position: | chr25:33665552-33665796 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 99-323 |
| Cow position: | chr25:18194792-18195021 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 99-323 |
| Cow position: | chr25:27022260-27022489 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 99-324 |
| Cow position: | chr25:17589248-17589472 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 161, 42 |
| Conread position: | 99-324 |
| Cow position: | chr25:19917390-19917160 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 148, 42 |
| Conread position: | 99-324 |
| Cow position: | chr25:32580271-32580042 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 42 |
| Conread position: | 101-324 |
| Cow position: | chr25:20494653-20494434 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 104-324 |
| Cow position: | chr25:17468401-17468622 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 104-324 |
| Cow position: | chr25:18275527-18275757 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 120, 37 |
| Conread position: | 104-338 |
| Cow position: | chr25:18060301-18060537 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 133, 37 |
| Conread position: | 105-324 |
| Cow position: | chr25:18303701-18303477 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 105-328 |
| Cow position: | chr25:34656145-34656373 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 111-324 |
| Cow position: | chr25:9544355-9544139 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 112-324 |
| Cow position: | chr25:35362136-35362353 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 29 |
| Conread position: | 115-311 |
| Cow position: | chr25:26922506-26922306 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 135, 20 |
| Conread position: | 115-324 |
| Cow position: | chr25:20776612-20776822 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 118-323 |
| Cow position: | chr25:18889728-18889939 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 118-324 |
| Cow position: | chr25:13781317-13781106 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 118-324 |
| Cow position: | chr25:22147782-22147571 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 118-324 |
| Cow position: | chr25:26279546-26279333 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 118-324 |
| Cow position: | chr25:34346730-34346941 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 119-324 |
| Cow position: | chr25:25506935-25506726 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 22 |
| Conread position: | 120-324 |
| Cow position: | chr25:12942415-12942624 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 128, 21 |
| Conread position: | 154-323 |
| Cow position: | chr25:18027372-18027548 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 96, 170 |
Show alignments to all cow chromosomes.