Cow genome map

Conread name: rece02_c23.y1

Conread position: 2-267
Cow position:
Alignm length: 272
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 45

Conread position: 3-279
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 217, 33

Conread position: 3-290
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 3-317
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 3-322
Cow position:
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 37

Conread position: 3-324
Cow position:
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 3-324
Cow position:
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 3-324
Cow position:
Alignm length: 331
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 4-324
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 44

Conread position: 5-280
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 43

Conread position: 5-324
Cow position:
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 5-330
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 40

Conread position: 6-323
Cow position:
Alignm length: 328
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 30

Conread position: 6-324
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 9

Conread position: 14-284
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 88

Conread position: 17-324
Cow position:
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 17-324
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 223, 119

Conread position: 26-324
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 147, 18

Conread position: 28-324
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 10

Conread position: 29-323
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 17, 115

Conread position: 29-323
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 43

Conread position: 36-324
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 109

Conread position: 37-279
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 30

Conread position: 40-314
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 101

Conread position: 42-323
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 74

Conread position: 42-324
Cow position:
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 18

Conread position: 44-325
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 39

Conread position: 60-324
Cow position:
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 21

Conread position: 60-324
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 156, 79

Conread position: 60-324
Cow position:
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 62-329
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 138, 38

Conread position: 69-324
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 17

Conread position: 70-324
Cow position:
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 73-314
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 64

Conread position: 73-323
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 152, 68

Conread position: 73-324
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 175, 68

Conread position: 73-324
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 177, 68

Conread position: 77-324
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 66

Conread position: 82-322
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 119, 20

Conread position: 82-324
Cow position:
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 20

Conread position: 82-324
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 165, 30

Conread position: 98-324
Cow position:
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 98-328
Cow position:
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 99-314
Cow position:
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 42

Conread position: 99-321
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 42

Conread position: 99-321
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 24

Conread position: 99-323
Cow position:
Alignm length: 232
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 42

Conread position: 100-324
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 41

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 147, 40

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 145, 14

Conread position: 105-302
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 142, 36

Conread position: 105-321
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 37

Conread position: 105-324
Cow position:
Alignm length: 229
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 111-324
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 139, 30

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 129, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 61, 29

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 139, 21

Conread position: 116-324
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 131, 11

Conread position: 116-324
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 25

Conread position: 118-246
Cow position:
Alignm length: 129
Alignm identity: 110
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 118-322
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-322
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 129, 23

Conread position: 118-323
Cow position:
Alignm length: 208
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 129, 21

Conread position: 118-324
Cow position:
Alignm length: 213
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 24

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-325
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 23

Conread position: 119-324
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 120-324
Cow position:
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 21

Conread position: 120-324
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 21

Conread position: 121-324
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 21

Conread position: 122-324
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 128, 19

Conread position: 124-324
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 123, 17

Conread position: 125-324
Cow position:
Alignm length: 201
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 16

Conread position: 127-320
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 128-323
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 13

Conread position: 142-320
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 181

Conread position: 142-324
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 0

Conread position: 145-324
Cow position:
Alignm length: 195
Alignm identity: 157
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 0

Conread position: 146-324
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 160

Conread position: 151-324
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 157-323
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 11

Conread position: 171-323
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 9

Conread position: 174-324
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 177-325
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 66

Conread position: 180-324
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 8

Conread position: 184-324
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 189-324
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 194-324
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 98

Show alignments to all cow chromosomes.