Cow genome map

Conread name: rece02_c23.y1

Conread position: 3-322
Cow position:
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 11

Conread position: 3-324
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 12

Conread position: 3-324
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 42

Conread position: 3-324
Cow position:
Alignm length: 327
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 50

Conread position: 3-324
Cow position:
Alignm length: 332
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 43

Conread position: 5-321
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 43

Conread position: 5-324
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 31

Conread position: 5-324
Cow position:
Alignm length: 330
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 28

Conread position: 5-324
Cow position:
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 44

Conread position: 5-324
Cow position:
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 29

Conread position: 7-255
Cow position:
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 136

Conread position: 9-320
Cow position:
Alignm length: 325
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 13-324
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 35

Conread position: 23-324
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 54

Conread position: 24-298
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 28

Conread position: 24-316
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 12

Conread position: 24-329
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 24

Conread position: 31-324
Cow position:
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 109

Conread position: 37-323
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 106

Conread position: 40-324
Cow position:
Alignm length: 294
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 42-269
Cow position:
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 98

Conread position: 44-338
Cow position:
Alignm length: 304
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 66

Conread position: 50-317
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 26

Conread position: 52-324
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 88

Conread position: 54-320
Cow position:
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 60-322
Cow position:
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 84

Conread position: 63-324
Cow position:
Alignm length: 272
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 77

Conread position: 69-317
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 174, 6

Conread position: 76-324
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 63

Conread position: 86-324
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 55

Conread position: 93-324
Cow position:
Alignm length: 239
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 157, 11

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 29

Conread position: 99-324
Cow position:
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 64, 45

Conread position: 101-318
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 152, 38

Conread position: 104-324
Cow position:
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 37

Conread position: 104-329
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 143, 38

Conread position: 105-324
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 145, 36

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 12, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-329
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 7, 37

Conread position: 111-318
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 31

Conread position: 111-324
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 139, 5

Conread position: 111-324
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 137, 30

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 115-324
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 131, 27

Conread position: 116-323
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 131, 25

Conread position: 116-324
Cow position:
Alignm length: 216
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 131, 25

Conread position: 117-324
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 24

Conread position: 118-314
Cow position:
Alignm length: 204
Alignm identity: 164
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 132, 23

Conread position: 118-314
Cow position:
Alignm length: 205
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 95, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-325
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 130, 23

Conread position: 119-324
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 22

Conread position: 120-314
Cow position:
Alignm length: 202
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 127, 21

Conread position: 120-324
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 128, 21

Conread position: 120-324
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 130, 21

Conread position: 121-324
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 129, 20

Conread position: 122-323
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 128, 19

Conread position: 131-324
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 125, 10

Conread position: 143-324
Cow position:
Alignm length: 190
Alignm identity: 153
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 161-323
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 163-327
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 18

Conread position: 172-324
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 78, 0

Show alignments to all cow chromosomes.