Cow genome map
Conread name: | rece02_c23.y1 |
Conread position: | 2-313 |
Cow position: | chr8:38606923-38607233 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 235 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 56, 43 |
Conread position: | 3-286 |
Cow position: | chr8:16083931-16083646 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 43 |
Conread position: | 3-311 |
Cow position: | chr8:11969996-11970298 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 31 |
Conread position: | 3-321 |
Cow position: | chr8:44693884-44693572 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 42 |
Conread position: | 3-324 |
Cow position: | chr8:24419935-24420249 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 42 |
Conread position: | 3-324 |
Cow position: | chr8:33430514-33430201 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 45 |
Conread position: | 3-324 |
Cow position: | chr8:61034748-61035088 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 71 |
Conread position: | 3-329 |
Cow position: | chr8:45160771-45161100 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 29 |
Conread position: | 5-251 |
Cow position: | chr8:47673072-47672832 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 40 |
Conread position: | 5-324 |
Cow position: | chr8:25543103-25542782 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 43 |
Conread position: | 17-323 |
Cow position: | chr8:47491241-47491551 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 215 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 39, 31 |
Conread position: | 17-324 |
Cow position: | chr8:8533035-8533344 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 234 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 38, 27 |
Conread position: | 19-324 |
Cow position: | chr8:23765819-23766118 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 39, 26 |
Conread position: | 21-324 |
Cow position: | chr8:42467906-42467605 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 24 |
Conread position: | 29-246 |
Cow position: | chr8:44076311-44076522 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 99, 70 |
Conread position: | 29-319 |
Cow position: | chr8:13809184-13808886 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 217 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 10, 33 |
Conread position: | 44-321 |
Cow position: | chr8:46221769-46222049 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 200 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 12, 60 |
Conread position: | 44-329 |
Cow position: | chr8:46632834-46633120 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 208 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 12, 51 |
Conread position: | 60-323 |
Cow position: | chr8:47885582-47885315 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 194 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 70, 99 |
Conread position: | 69-321 |
Cow position: | chr8:45316584-45316842 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 193 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 26, 73 |
Conread position: | 69-324 |
Cow position: | chr8:27925861-27925597 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 78 |
Conread position: | 73-309 |
Cow position: | chr8:51667760-51668002 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 189 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 49, 9 |
Conread position: | 73-324 |
Cow position: | chr8:3785246-3784990 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 68 |
Conread position: | 76-308 |
Cow position: | chr8:15687628-15687862 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 166 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 144, 24 |
Conread position: | 99-323 |
Cow position: | chr8:27578912-27578683 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 42 |
Conread position: | 99-324 |
Cow position: | chr8:1153797-1154027 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 42 |
Conread position: | 99-324 |
Cow position: | chr8:1319555-1319325 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-324 |
Cow position: | chr8:6065258-6065488 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-324 |
Cow position: | chr8:9735757-9735527 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-324 |
Cow position: | chr8:12449458-12449228 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 174 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-324 |
Cow position: | chr8:22571785-22572016 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 99-324 |
Cow position: | chr8:26005086-26005317 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 43 |
Conread position: | 101-324 |
Cow position: | chr8:45189592-45189368 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 184 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 126, 40 |
Conread position: | 104-309 |
Cow position: | chr8:45448963-45448753 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 166 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 12, 39 |
Conread position: | 104-324 |
Cow position: | chr8:9275516-9275292 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 37 |
Conread position: | 105-324 |
Cow position: | chr8:32931015-32930791 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 37 |
Conread position: | 105-328 |
Cow position: | chr8:23217265-23217036 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 37 |
Conread position: | 112-323 |
Cow position: | chr8:2886248-2886032 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 29 |
Conread position: | 112-323 |
Cow position: | chr8:8556651-8556867 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-324 |
Cow position: | chr8:8655721-8655939 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-324 |
Cow position: | chr8:10748872-10748655 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 29 |
Conread position: | 112-324 |
Cow position: | chr8:14928496-14928713 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 168 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 138, 11 |
Conread position: | 112-324 |
Cow position: | chr8:32631530-32631745 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-324 |
Cow position: | chr8:44036281-44036497 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 166 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 71, 29 |
Conread position: | 112-324 |
Cow position: | chr8:47069308-47069526 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 29 |
Conread position: | 112-324 |
Cow position: | chr8:47074765-47074550 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 169 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 124, 33 |
Conread position: | 115-324 |
Cow position: | chr8:11774404-11774189 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 157 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 135, 26 |
Conread position: | 116-308 |
Cow position: | chr8:34348171-34347975 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 25 |
Conread position: | 118-322 |
Cow position: | chr8:50994279-50994070 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-323 |
Cow position: | chr8:33588865-33588660 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 170 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr8:2170888-2171099 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 167 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 125, 23 |
Conread position: | 118-324 |
Cow position: | chr8:4686884-4686673 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 170 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:5016672-5016461 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:8229290-8229501 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 165 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 128, 23 |
Conread position: | 118-324 |
Cow position: | chr8:10743139-10743350 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 171 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr8:11832191-11831978 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 171 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:17311509-17311297 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr8:19050967-19050756 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 170 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 118-324 |
Cow position: | chr8:19330227-19330016 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 167 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:23771126-23770915 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 170 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:24915846-24916057 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:25776182-25776393 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:32319058-32319269 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 168 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:38390859-38390648 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 171 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr8:44244082-44244294 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:47661834-47662046 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:49214918-49214707 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 171 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr8:50288660-50288871 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 118-324 |
Cow position: | chr8:59262402-59262613 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 23 |
Conread position: | 118-324 |
Cow position: | chr8:60060871-60060662 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 167 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 14, 24 |
Conread position: | 118-331 |
Cow position: | chr8:14591411-14591626 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 171 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 119-327 |
Cow position: | chr8:39195727-39195938 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 170 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 131, 23 |
Conread position: | 122-324 |
Cow position: | chr8:36636056-36636262 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 164 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 128, 19 |
Conread position: | 122-324 |
Cow position: | chr8:42759431-42759224 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 126, 19 |
Conread position: | 125-324 |
Cow position: | chr8:3856532-3856734 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 164 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 125, 16 |
Conread position: | 125-324 |
Cow position: | chr8:25522885-25522681 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 166 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 122, 16 |
Conread position: | 128-324 |
Cow position: | chr8:27983316-27983515 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 159 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 122, 13 |
Conread position: | 136-324 |
Cow position: | chr8:9540020-9540213 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 156 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 9, 33 |
Conread position: | 141-324 |
Cow position: | chr8:61066776-61066964 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 106, 137 |
Conread position: | 142-327 |
Cow position: | chr8:8910690-8910498 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 153 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 167-324 |
Cow position: | chr8:36637214-36637377 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 174-324 |
Cow position: | chr8:25407882-25407725 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 128 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.