Cow genome map

Conread name: rece02_c23.y1

Conread position: 2-313
Cow position: chr8:38606923-38607233 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 43

Conread position: 3-286
Cow position: chr8:16083931-16083646 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 43

Conread position: 3-311
Cow position: chr8:11969996-11970298 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 3-321
Cow position: chr8:44693884-44693572 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 3-324
Cow position: chr8:24419935-24420249 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 3-324
Cow position: chr8:33430514-33430201 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 45

Conread position: 3-324
Cow position: chr8:61034748-61035088 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 3-329
Cow position: chr8:45160771-45161100 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 5-251
Cow position: chr8:47673072-47672832 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 5-324
Cow position: chr8:25543103-25542782 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 43

Conread position: 17-323
Cow position: chr8:47491241-47491551 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 31

Conread position: 17-324
Cow position: chr8:8533035-8533344 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 27

Conread position: 19-324
Cow position: chr8:23765819-23766118 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 26

Conread position: 21-324
Cow position: chr8:42467906-42467605 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 24

Conread position: 29-246
Cow position: chr8:44076311-44076522 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 70

Conread position: 29-319
Cow position: chr8:13809184-13808886 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 33

Conread position: 44-321
Cow position: chr8:46221769-46222049 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 60

Conread position: 44-329
Cow position: chr8:46632834-46633120 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 51

Conread position: 60-323
Cow position: chr8:47885582-47885315 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 99

Conread position: 69-321
Cow position: chr8:45316584-45316842 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 26, 73

Conread position: 69-324
Cow position: chr8:27925861-27925597 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 73-309
Cow position: chr8:51667760-51668002 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 49, 9

Conread position: 73-324
Cow position: chr8:3785246-3784990 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 68

Conread position: 76-308
Cow position: chr8:15687628-15687862 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 24

Conread position: 99-323
Cow position: chr8:27578912-27578683 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position: chr8:1153797-1154027 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position: chr8:1319555-1319325 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chr8:6065258-6065488 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chr8:9735757-9735527 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chr8:12449458-12449228 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chr8:22571785-22572016 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chr8:26005086-26005317 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 43

Conread position: 101-324
Cow position: chr8:45189592-45189368 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 126, 40

Conread position: 104-309
Cow position: chr8:45448963-45448753 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 39

Conread position: 104-324
Cow position: chr8:9275516-9275292 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 37

Conread position: 105-324
Cow position: chr8:32931015-32930791 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-328
Cow position: chr8:23217265-23217036 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 112-323
Cow position: chr8:2886248-2886032 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 29

Conread position: 112-323
Cow position: chr8:8556651-8556867 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chr8:8655721-8655939 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chr8:10748872-10748655 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 29

Conread position: 112-324
Cow position: chr8:14928496-14928713 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 138, 11

Conread position: 112-324
Cow position: chr8:32631530-32631745 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chr8:44036281-44036497 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 71, 29

Conread position: 112-324
Cow position: chr8:47069308-47069526 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chr8:47074765-47074550 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 33

Conread position: 115-324
Cow position: chr8:11774404-11774189 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 26

Conread position: 116-308
Cow position: chr8:34348171-34347975 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 25

Conread position: 118-322
Cow position: chr8:50994279-50994070 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-323
Cow position: chr8:33588865-33588660 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr8:2170888-2171099 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 125, 23

Conread position: 118-324
Cow position: chr8:4686884-4686673 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:5016672-5016461 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:8229290-8229501 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 128, 23

Conread position: 118-324
Cow position: chr8:10743139-10743350 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr8:11832191-11831978 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:17311509-17311297 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr8:19050967-19050756 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 20

Conread position: 118-324
Cow position: chr8:19330227-19330016 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:23771126-23770915 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:24915846-24916057 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:25776182-25776393 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:32319058-32319269 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:38390859-38390648 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr8:44244082-44244294 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:47661834-47662046 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:49214918-49214707 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr8:50288660-50288871 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chr8:59262402-59262613 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chr8:60060871-60060662 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 24

Conread position: 118-331
Cow position: chr8:14591411-14591626 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 132, 23

Conread position: 119-327
Cow position: chr8:39195727-39195938 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 131, 23

Conread position: 122-324
Cow position: chr8:36636056-36636262 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 128, 19

Conread position: 122-324
Cow position: chr8:42759431-42759224 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 126, 19

Conread position: 125-324
Cow position: chr8:3856532-3856734 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 125, 16

Conread position: 125-324
Cow position: chr8:25522885-25522681 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 122, 16

Conread position: 128-324
Cow position: chr8:27983316-27983515 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 13

Conread position: 136-324
Cow position: chr8:9540020-9540213 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 33

Conread position: 141-324
Cow position: chr8:61066776-61066964 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 137

Conread position: 142-327
Cow position: chr8:8910690-8910498 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 105, 0

Conread position: 167-324
Cow position: chr8:36637214-36637377 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 174-324
Cow position: chr8:25407882-25407725 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.