Cow genome map

Conread name: rece02_c23.y1

Conread position: 3-255
Cow position:
Alignm length: 256
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 3-324
Cow position:
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 3-324
Cow position:
Alignm length: 329
Alignm identity: 235
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 247, 35

Conread position: 3-324
Cow position:
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 39

Conread position: 3-324
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 43

Conread position: 3-325
Cow position:
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 41

Conread position: 5-270
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 30

Conread position: 5-323
Cow position:
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 9

Conread position: 5-324
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 31

Conread position: 5-324
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 39

Conread position: 5-332
Cow position:
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 17-323
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 14

Conread position: 17-330
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 52

Conread position: 31-302
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 8, 110

Conread position: 44-337
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 56-324
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 191, 52

Conread position: 60-323
Cow position:
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 60-324
Cow position:
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 60-324
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 193, 79

Conread position: 60-325
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 30

Conread position: 61-319
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 77

Conread position: 62-303
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 111, 51

Conread position: 68-329
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 33

Conread position: 69-324
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 14

Conread position: 70-324
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 173, 12

Conread position: 73-246
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 68

Conread position: 73-270
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 165, 68

Conread position: 73-324
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 173, 68

Conread position: 85-324
Cow position:
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 96-324
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 46

Conread position: 97-322
Cow position:
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 98-324
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 43

Conread position: 98-324
Cow position:
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 99-308
Cow position:
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-314
Cow position:
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 42

Conread position: 99-321
Cow position:
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-323
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 148, 45

Conread position: 99-323
Cow position:
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 40

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 144, 42

Conread position: 99-324
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 228
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 101, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 148, 46

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 149, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 26

Conread position: 99-324
Cow position:
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 100-319
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 13

Conread position: 100-324
Cow position:
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 100-324
Cow position:
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 100-324
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 150, 42

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 40

Conread position: 101-324
Cow position:
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 104-324
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 137, 35

Conread position: 104-324
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 38

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 98

Conread position: 105-325
Cow position:
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 37

Conread position: 110-324
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 62, 31

Conread position: 111-324
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 137, 30

Conread position: 111-324
Cow position:
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 25

Conread position: 111-324
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 136, 30

Conread position: 112-323
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 30

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 219
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 23

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 136, 29

Conread position: 112-324
Cow position:
Alignm length: 222
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 61, 30

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 136, 27

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-325
Cow position:
Alignm length: 221
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 30

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 133, 10

Conread position: 115-324
Cow position:
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 116-324
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 134, 25

Conread position: 117-324
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 133, 24

Conread position: 118-314
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 23

Conread position: 118-314
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 132, 23

Conread position: 118-320
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 23

Conread position: 118-323
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 129, 23

Conread position: 118-323
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 132, 24

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 136, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 129, 23

Conread position: 119-294
Cow position:
Alignm length: 183
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 128, 22

Conread position: 119-324
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 131, 22

Conread position: 120-324
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 21

Conread position: 121-324
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 121-324
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 22

Conread position: 122-323
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 17

Conread position: 123-324
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 18

Conread position: 125-319
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 16

Conread position: 126-324
Cow position:
Alignm length: 206
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 15

Conread position: 131-324
Cow position:
Alignm length: 202
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 159

Conread position: 141-324
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 107, 0

Conread position: 141-324
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 0

Conread position: 143-324
Cow position:
Alignm length: 192
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 144-324
Cow position:
Alignm length: 188
Alignm identity: 155
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 103, 0

Conread position: 144-324
Cow position:
Alignm length: 188
Alignm identity: 154
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 103, 0

Conread position: 144-324
Cow position:
Alignm length: 188
Alignm identity: 152
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 103, 20

Conread position: 150-324
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 20

Conread position: 163-324
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 123

Conread position: 172-324
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 190-324
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 191-324
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 196-324
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.