Cow genome map

Conread name: rece02_c23.y1

Conread position: 3-255
Cow position: chrX:21587357-21587107 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 3-324
Cow position: chrX:2143446-2143120 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 3-324
Cow position: chrX:30142240-30142555 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 247, 35

Conread position: 3-324
Cow position: chrX:31725187-31724864 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 39

Conread position: 3-324
Cow position: chrX:44386631-44386310 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 43

Conread position: 3-325
Cow position: chrX:2536637-2536934 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 41

Conread position: 5-270
Cow position: chrX:22130518-22130787 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 30

Conread position: 5-323
Cow position: chrX:17668146-17668451 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 9

Conread position: 5-324
Cow position: chrX:12973072-12973391 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 31

Conread position: 5-324
Cow position: chrX:18533148-18532836 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 39

Conread position: 5-332
Cow position: chrX:28550024-28549697 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 17-323
Cow position: chrX:21270050-21270357 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 14

Conread position: 17-330
Cow position: chrX:24138879-24139194 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 52

Conread position: 31-302
Cow position: chrX:20698160-20698435 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 8, 110

Conread position: 44-337
Cow position: chrX:40247198-40247488 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 56-324
Cow position: chrX:35389992-35390256 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 191, 52

Conread position: 60-323
Cow position: chrX:30173560-30173831 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 60-324
Cow position: chrX:10531447-10531720 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 60-324
Cow position: chrX:17631722-17631986 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 193, 79

Conread position: 60-325
Cow position: chrX:10417850-10418113 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 30

Conread position: 61-319
Cow position: chrX:5840438-5840176 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 77

Conread position: 62-303
Cow position: chrX:34989002-34988756 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 111, 51

Conread position: 68-329
Cow position: chrX:29998884-29998625 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 33

Conread position: 69-324
Cow position: chrX:7752002-7751738 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 14

Conread position: 70-324
Cow position: chrX:24114091-24114349 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 173, 12

Conread position: 73-246
Cow position: chrX:4795985-4795812 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 68

Conread position: 73-270
Cow position: chrX:29096295-29096096 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 165, 68

Conread position: 73-324
Cow position: chrX:23455484-23455740 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 173, 68

Conread position: 85-324
Cow position: chrX:8587180-8586932 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 96-324
Cow position: chrX:21289419-21289653 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 46

Conread position: 97-322
Cow position: chrX:13398046-13398276 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 98-324
Cow position: chrX:31187176-31187407 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 43

Conread position: 98-324
Cow position: chrX:40056996-40057227 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 99-308
Cow position: chrX:2101927-2101713 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-314
Cow position: chrX:22582631-22582852 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 42

Conread position: 99-321
Cow position: chrX:12353308-12353081 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-323
Cow position: chrX:7093666-7093437 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 148, 45

Conread position: 99-323
Cow position: chrX:39563863-39564092 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 42

Conread position: 99-324
Cow position: chrX:1942976-1943206 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:2562789-2563019 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:2604116-2603887 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 42

Conread position: 99-324
Cow position: chrX:5323655-5323885 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position: chrX:5863466-5863236 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 40

Conread position: 99-324
Cow position: chrX:9125427-9125197 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:11464934-11465164 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 144, 42

Conread position: 99-324
Cow position: chrX:12280202-12280431 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:12654692-12654917 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:14786804-14787034 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:21340472-21340238 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 101, 42

Conread position: 99-324
Cow position: chrX:22525536-22525766 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:22778381-22778150 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 99-324
Cow position: chrX:27426252-27426478 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 148, 46

Conread position: 99-324
Cow position: chrX:28585048-28584818 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 99-324
Cow position: chrX:28634348-28634578 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 149, 42

Conread position: 99-324
Cow position: chrX:28758573-28758803 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 42

Conread position: 99-324
Cow position: chrX:31493488-31493262 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 26

Conread position: 99-324
Cow position: chrX:35529930-35529698 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 99-324
Cow position: chrX:37812230-37812000 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 99-324
Cow position: chrX:37849082-37848852 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 100-319
Cow position: chrX:6015395-6015620 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 13

Conread position: 100-324
Cow position: chrX:1833898-1833666 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 100-324
Cow position: chrX:7030256-7030027 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 100-324
Cow position: chrX:24484346-24484574 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 150, 42

Conread position: 101-324
Cow position: chrX:21602945-21602717 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 101-324
Cow position: chrX:21632521-21632749 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 40

Conread position: 101-324
Cow position: chrX:26627966-26628194 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 104-324
Cow position: chrX:19928354-19928133 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 137, 35

Conread position: 104-324
Cow position: chrX:22814446-22814220 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 38

Conread position: 105-324
Cow position: chrX:6873010-6873233 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 37

Conread position: 105-324
Cow position: chrX:13006562-13006787 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 37

Conread position: 105-324
Cow position: chrX:24136342-24136561 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position: chrX:30044082-30044307 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 105-324
Cow position: chrX:39719503-39719275 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 98

Conread position: 105-325
Cow position: chrX:6909283-6909493 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 37

Conread position: 110-324
Cow position: chrX:47457640-47457860 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 62, 31

Conread position: 111-324
Cow position: chrX:12669808-12670027 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 137, 30

Conread position: 111-324
Cow position: chrX:29285472-29285256 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 25

Conread position: 111-324
Cow position: chrX:30056701-30056480 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 136, 30

Conread position: 112-323
Cow position: chrX:17051150-17050932 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 30

Conread position: 112-324
Cow position: chrX:982693-982476 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chrX:5283680-5283896 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 29

Conread position: 112-324
Cow position: chrX:8670646-8670430 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 23

Conread position: 112-324
Cow position: chrX:9008393-9008176 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chrX:9192589-9192806 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chrX:16363069-16363286 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chrX:16461725-16461515 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 136, 29

Conread position: 112-324
Cow position: chrX:17478467-17478686 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chrX:20804182-20803964 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 61, 30

Conread position: 112-324
Cow position: chrX:21304471-21304688 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chrX:24089457-24089240 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 29

Conread position: 112-324
Cow position: chrX:24275725-24275510 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 136, 27

Conread position: 112-324
Cow position: chrX:28562159-28562376 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 29

Conread position: 112-324
Cow position: chrX:39521962-39521745 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-324
Cow position: chrX:41410966-41411183 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 112-325
Cow position: chrX:8454807-8454589 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 115-324
Cow position: chrX:12803812-12804026 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position: chrX:13076645-13076859 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position: chrX:13097219-13097433 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position: chrX:15179379-15179593 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 115-324
Cow position: chrX:22619256-22619471 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 30

Conread position: 115-324
Cow position: chrX:28603407-28603620 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 133, 10

Conread position: 115-324
Cow position: chrX:29947759-29947545 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 116-324
Cow position: chrX:26767147-26767360 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 134, 25

Conread position: 117-324
Cow position: chrX:15127192-15127403 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 133, 24

Conread position: 118-314
Cow position: chrX:5299174-5299371 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 23

Conread position: 118-314
Cow position: chrX:12478769-12478566 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 132, 23

Conread position: 118-320
Cow position: chrX:23019373-23019165 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 23

Conread position: 118-323
Cow position: chrX:970816-970605 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 129, 23

Conread position: 118-323
Cow position: chrX:18954476-18954683 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:1546984-1546773 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 118-324
Cow position: chrX:2482589-2482800 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position: chrX:16699349-16699138 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:21222977-21222766 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:22488230-22488019 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:23041074-23041285 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position: chrX:23391550-23391761 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:26528025-26527814 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 132, 24

Conread position: 118-324
Cow position: chrX:26758556-26758767 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 136, 23

Conread position: 118-324
Cow position: chrX:30183845-30184056 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 130, 23

Conread position: 118-324
Cow position: chrX:30232059-30232270 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:30711398-30711191 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:32467301-32467090 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 118-324
Cow position: chrX:38146354-38146143 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 129, 23

Conread position: 119-294
Cow position: chrX:23277070-23276890 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 128, 22

Conread position: 119-324
Cow position: chrX:320516-320306 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 131, 22

Conread position: 120-324
Cow position: chrX:15598977-15598768 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 21

Conread position: 121-324
Cow position: chrX:21829571-21829362 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 121-324
Cow position: chrX:38575775-38575984 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 22

Conread position: 122-323
Cow position: chrX:29758207-29757999 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 17

Conread position: 123-324
Cow position: chrX:11663461-11663667 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 18

Conread position: 125-319
Cow position: chrX:12997537-12997739 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 16

Conread position: 126-324
Cow position: chrX:13413075-13413278 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 15

Conread position: 131-324
Cow position: chrX:3084863-3085063 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 159

Conread position: 141-324
Cow position: chrX:5833936-5834126 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 107, 0

Conread position: 141-324
Cow position: chrX:29853538-29853728 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 0

Conread position: 143-324
Cow position: chrX:32094937-32095128 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 144-324
Cow position: chrX:2859776-2859963 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 155
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 103, 0

Conread position: 144-324
Cow position: chrX:5394937-5395124 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 154
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 103, 0

Conread position: 144-324
Cow position: chrX:26400444-26400629 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 152
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 103, 20

Conread position: 150-324
Cow position: chrX:2787211-2787393 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 20

Conread position: 163-324
Cow position: chrX:21490235-21490069 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 123

Conread position: 172-324
Cow position: chrX:17250334-17250494 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 190-324
Cow position: chrX:12288957-12289103 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 191-324
Cow position: chrX:5336491-5336630 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 196-324
Cow position: chrX:11668469-11668604 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.