Cow genome map

Conread name: reep13c_k20.y1

Conread position: 264-440
Cow position: chr20:35445124-35444953 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 25

Conread position: 269-438
Cow position: chr20:29845031-29845198 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 35

Conread position: 269-438
Cow position: chr20:34777161-34777328 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 31

Conread position: 269-441
Cow position: chr20:5078605-5078778 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 284-440
Cow position: chr20:10772201-10772355 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 285-435
Cow position: chr20:30888030-30888180 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 14

Conread position: 285-440
Cow position: chr20:25162131-25161975 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 286-417
Cow position: chr20:3606964-3606834 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 286-426
Cow position: chr20:1009708-1009570 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 286-433
Cow position: chr20:33363513-33363661 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 286-434
Cow position: chr20:22030318-22030464 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 286-438
Cow position: chr20:8308017-8308164 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 286-438
Cow position: chr20:39266960-39266810 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 286-439
Cow position: chr20:38089910-38090062 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 286-440
Cow position: chr20:398309-398157 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 286-440
Cow position: chr20:2169725-2169573 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 286-440
Cow position: chr20:4787015-4786868 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 73

Conread position: 286-440
Cow position: chr20:8547063-8547216 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 97

Conread position: 286-440
Cow position: chr20:8556272-8556119 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 286-440
Cow position: chr20:8702919-8702761 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 64

Conread position: 286-440
Cow position: chr20:11043479-11043324 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 86

Conread position: 286-440
Cow position: chr20:12581958-12581804 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 286-440
Cow position: chr20:14980514-14980356 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 149

Conread position: 286-440
Cow position: chr20:18379374-18379528 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 112

Conread position: 286-440
Cow position: chr20:19363367-19363213 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 132

Conread position: 286-440
Cow position: chr20:20203214-20203369 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 23

Conread position: 286-440
Cow position: chr20:22978324-22978477 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 286-440
Cow position: chr20:28605207-28605359 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 286-440
Cow position: chr20:28982697-28982850 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 84

Conread position: 286-440
Cow position: chr20:32463523-32463374 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 286-440
Cow position: chr20:32847340-32847495 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 9

Conread position: 286-440
Cow position: chr20:36207803-36207964 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 286-440
Cow position: chr20:40177243-40177395 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 286-441
Cow position: chr20:5702721-5702875 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 286-441
Cow position: chr20:5998674-5998514 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 21

Conread position: 286-441
Cow position: chr20:14806884-14807038 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 286-441
Cow position: chr20:18320793-18320643 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 286-441
Cow position: chr20:19060841-19060688 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 86

Conread position: 286-442
Cow position: chr20:11550364-11550518 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 86

Conread position: 286-442
Cow position: chr20:25351409-25351261 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 67

Conread position: 286-443
Cow position: chr20:11542285-11542134 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 38

Conread position: 286-444
Cow position: chr20:24069802-24069959 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 144, 0

Conread position: 286-454
Cow position: chr20:21999996-22000165 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 89

Conread position: 287-440
Cow position: chr20:10208804-10208958 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 126

Conread position: 287-440
Cow position: chr20:12239685-12239533 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 86

Conread position: 288-436
Cow position: chr20:39212578-39212435 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 288-440
Cow position: chr20:6240520-6240371 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 288-440
Cow position: chr20:19459666-19459515 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 288-440
Cow position: chr20:20158132-20158286 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 289-434
Cow position: chr20:11392783-11392921 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 289-440
Cow position: chr20:9412487-9412638 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 289-440
Cow position: chr20:38514781-38514928 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 289-443
Cow position: chr20:11751653-11751805 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 291-440
Cow position: chr20:7756623-7756475 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 85

Conread position: 291-440
Cow position: chr20:23846663-23846514 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 16

Conread position: 291-443
Cow position: chr20:8578250-8578402 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 291-443
Cow position: chr20:16935308-16935162 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 292-439
Cow position: chr20:14620298-14620152 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 7

Conread position: 292-440
Cow position: chr20:2298785-2298640 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 120

Conread position: 292-440
Cow position: chr20:26723672-26723531 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 292-444
Cow position: chr20:17100365-17100516 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 293-440
Cow position: chr20:25009627-25009482 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 294-438
Cow position: chr20:4334526-4334381 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 294-443
Cow position: chr20:26996535-26996682 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 295-440
Cow position: chr20:21815565-21815711 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 295-440
Cow position: chr20:38768455-38768313 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 296-440
Cow position: chr20:7738225-7738081 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 300-434
Cow position: chr20:22265236-22265108 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 300-439
Cow position: chr20:8620138-8620001 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 300-440
Cow position: chr20:3255047-3255187 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 45

Conread position: 300-440
Cow position: chr20:7426187-7426047 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 10

Conread position: 300-440
Cow position: chr20:8912489-8912348 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 300-440
Cow position: chr20:17845971-17846110 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 138, 55

Conread position: 300-440
Cow position: chr20:33976495-33976631 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 88

Conread position: 300-440
Cow position: chr20:38670760-38670900 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 302-440
Cow position: chr20:12420606-12420469 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 302-440
Cow position: chr20:14759653-14759515 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 302-440
Cow position: chr20:24097013-24097151 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 302-441
Cow position: chr20:21428173-21428310 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 113

Conread position: 302-445
Cow position: chr20:7438839-7438696 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 303-443
Cow position: chr20:6358634-6358773 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 304-435
Cow position: chr20:28441341-28441472 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 304-438
Cow position: chr20:13752237-13752373 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 304-438
Cow position: chr20:40157914-40158048 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 304-440
Cow position: chr20:15529875-15530010 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 306-437
Cow position: chr20:15766127-15766258 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 10

Conread position: 307-437
Cow position: chr20:8817474-8817344 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 307-439
Cow position: chr20:15548879-15548748 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 310-437
Cow position: chr20:3564180-3564303 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 310-438
Cow position: chr20:26077648-26077520 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 313-428
Cow position: chr20:38617863-38617979 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 314-440
Cow position: chr20:39155439-39155563 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 314-442
Cow position: chr20:37090646-37090777 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 321-443
Cow position: chr20:630556-630677 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 321-444
Cow position: chr20:23792635-23792758 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 325-434
Cow position: chr20:19636141-19636032 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 333-440
Cow position: chr20:26930251-26930359 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 335-440
Cow position: chr20:19834785-19834680 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 337-440
Cow position: chr20:26905722-26905825 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 337-444
Cow position: chr20:26041051-26040944 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 342-440
Cow position: chr20:20590249-20590151 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.