Cow genome map
| Conread name: | reep13c_k20.y1 |
| Conread position: | 269-438 |
| Cow position: | chr26:19774347-19774177 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 269-438 |
| Cow position: | chr26:22354368-22354536 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 269-440 |
| Cow position: | chr26:25393985-25394163 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 281-440 |
| Cow position: | chr26:8642913-8643065 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 285-440 |
| Cow position: | chr26:13021174-13021021 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 285-441 |
| Cow position: | chr26:6514813-6514968 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 286-438 |
| Cow position: | chr26:647754-647604 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 286-438 |
| Cow position: | chr26:23315742-23315896 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 286-438 |
| Cow position: | chr26:27491529-27491379 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 286-438 |
| Cow position: | chr26:32897899-32897743 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 125, 146 |
| Conread position: | 286-438 |
| Cow position: | chr26:34847714-34847866 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-439 |
| Cow position: | chr26:19110155-19110307 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 286-439 |
| Cow position: | chr26:22892475-22892322 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 286-440 |
| Cow position: | chr26:678009-677856 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:12145148-12144994 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:12964724-12964573 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:20769821-20769975 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 286-440 |
| Cow position: | chr26:24240648-24240803 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 286-440 |
| Cow position: | chr26:28251122-28251280 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:28423258-28423410 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:31605378-31605530 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:33112410-33112261 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 14 |
| Conread position: | 286-440 |
| Cow position: | chr26:33202097-33201946 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:33392365-33392518 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 286-440 |
| Cow position: | chr26:34560198-34560047 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 286-440 |
| Cow position: | chr26:35704359-35704508 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 286-441 |
| Cow position: | chr26:9491896-9492047 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 286-441 |
| Cow position: | chr26:18825316-18825158 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 286-444 |
| Cow position: | chr26:5836848-5836692 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 287-437 |
| Cow position: | chr26:22152199-22152348 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 287-438 |
| Cow position: | chr26:32863695-32863548 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 287-440 |
| Cow position: | chr26:7212615-7212460 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 287-440 |
| Cow position: | chr26:14175254-14175406 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 287-440 |
| Cow position: | chr26:19636263-19636418 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 287-440 |
| Cow position: | chr26:23924820-23924974 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 287-440 |
| Cow position: | chr26:26537553-26537395 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 287-442 |
| Cow position: | chr26:23582974-23582821 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 288-434 |
| Cow position: | chr26:15211776-15211921 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 289-440 |
| Cow position: | chr26:20291718-20291568 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 289-440 |
| Cow position: | chr26:34154106-34154258 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 290-440 |
| Cow position: | chr26:7314598-7314746 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 8 |
| Conread position: | 291-439 |
| Cow position: | chr26:21637061-21636915 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 291-440 |
| Cow position: | chr26:9535493-9535640 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 291-440 |
| Cow position: | chr26:19591458-19591607 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-440 |
| Cow position: | chr26:33736577-33736430 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 292-440 |
| Cow position: | chr26:5666024-5666173 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 293-439 |
| Cow position: | chr26:14481577-14481431 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 293-440 |
| Cow position: | chr26:12940377-12940524 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 300-438 |
| Cow position: | chr26:32955649-32955508 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 300-440 |
| Cow position: | chr26:6337777-6337911 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 300-440 |
| Cow position: | chr26:13802097-13802235 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 300-440 |
| Cow position: | chr26:18741073-18740933 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 300-444 |
| Cow position: | chr26:8700063-8699919 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 300-444 |
| Cow position: | chr26:19446118-19446260 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 302-440 |
| Cow position: | chr26:107011-107150 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 302-440 |
| Cow position: | chr26:11875234-11875097 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 303-440 |
| Cow position: | chr26:33241877-33242013 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 303-440 |
| Cow position: | chr26:34611193-34611057 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 304-442 |
| Cow position: | chr26:7687257-7687119 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-444 |
| Cow position: | chr26:8307540-8307400 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-444 |
| Cow position: | chr26:13292509-13292647 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-437 |
| Cow position: | chr26:17651951-17652081 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-440 |
| Cow position: | chr26:16594508-16594378 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 307-442 |
| Cow position: | chr26:26328904-26329033 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 309-440 |
| Cow position: | chr26:31137471-31137342 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 61 |
| Conread position: | 314-444 |
| Cow position: | chr26:33525096-33524960 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 318-444 |
| Cow position: | chr26:31888735-31888860 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 328-442 |
| Cow position: | chr26:10700890-10700777 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 330-440 |
| Cow position: | chr26:15132650-15132761 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 102 |
| Conread position: | 339-439 |
| Cow position: | chr26:7254984-7254884 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 341-440 |
| Cow position: | chr26:8341521-8341619 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 341-444 |
| Cow position: | chr26:28410008-28410111 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.