Cow genome map

Conread name: reep13c_k20.y1

Conread position: 269-440
Cow position: chr27:23485230-23485062 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 17

Conread position: 269-441
Cow position: chr27:18593288-18593121 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 31

Conread position: 285-437
Cow position: chr27:31378220-31378070 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 33

Conread position: 285-439
Cow position: chr27:27389017-27389173 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 286-420
Cow position: chr27:16625899-16625769 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 286-432
Cow position: chr27:7212710-7212856 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 286-434
Cow position: chr27:23510991-23510838 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 286-435
Cow position: chr27:20549706-20549857 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 286-436
Cow position: chr27:24014736-24014886 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 286-437
Cow position: chr27:26407164-26407307 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 286-438
Cow position: chr27:20812907-20812756 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 286-438
Cow position: chr27:22421848-22422000 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 286-438
Cow position: chr27:26151024-26150869 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 286-439
Cow position: chr27:28478583-28478430 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 286-440
Cow position: chr27:426971-426819 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 286-440
Cow position: chr27:1123032-1122881 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 286-440
Cow position: chr27:4673020-4672861 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 286-440
Cow position: chr27:16103809-16103661 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 286-440
Cow position: chr27:16284478-16284325 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 23

Conread position: 286-440
Cow position: chr27:17397450-17397605 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 286-440
Cow position: chr27:19509016-19508862 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 286-440
Cow position: chr27:20067974-20068125 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 286-440
Cow position: chr27:20795794-20795642 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 86

Conread position: 286-440
Cow position: chr27:20897022-20897172 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 286-440
Cow position: chr27:22035374-22035528 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 28

Conread position: 286-440
Cow position: chr27:22171301-22171149 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 86

Conread position: 286-440
Cow position: chr27:23483228-23483076 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 87

Conread position: 286-440
Cow position: chr27:23560029-23560182 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 286-440
Cow position: chr27:25720939-25721100 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 104

Conread position: 286-440
Cow position: chr27:26959615-26959766 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 17

Conread position: 286-441
Cow position: chr27:19685710-19685865 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 286-442
Cow position: chr27:18767061-18767213 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 286-442
Cow position: chr27:19388017-19387866 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 286-442
Cow position: chr27:26643687-26643537 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 132
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 286-444
Cow position: chr27:23107900-23108055 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 67

Conread position: 286-444
Cow position: chr27:28206802-28206647 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 14

Conread position: 287-440
Cow position: chr27:299381-299531 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 287-440
Cow position: chr27:4835603-4835758 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 287-446
Cow position: chr27:15668769-15668928 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 288-439
Cow position: chr27:22418769-22418916 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 288-440
Cow position: chr27:15409035-15409187 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 288-440
Cow position: chr27:23594321-23594171 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 288-441
Cow position: chr27:20828709-20828861 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 289-439
Cow position: chr27:1768625-1768773 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 289-439
Cow position: chr27:27136520-27136669 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 141, 0

Conread position: 289-440
Cow position: chr27:237269-237120 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 290-440
Cow position: chr27:4720118-4720263 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 290-440
Cow position: chr27:15454209-15454060 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 76

Conread position: 291-434
Cow position: chr27:26433811-26433951 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 291-440
Cow position: chr27:20092837-20092985 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 291-440
Cow position: chr27:27856330-27856182 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 291-444
Cow position: chr27:22220554-22220399 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 292-437
Cow position: chr27:4944517-4944662 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 292-438
Cow position: chr27:6073926-6073781 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 78

Conread position: 292-440
Cow position: chr27:26239023-26238875 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 11, 132

Conread position: 292-440
Cow position: chr27:27055284-27055138 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 81

Conread position: 292-443
Cow position: chr27:24440228-24440376 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 292-444
Cow position: chr27:24321184-24321035 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 79

Conread position: 295-440
Cow position: chr27:6106694-6106553 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 296-437
Cow position: chr27:21669124-21669265 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 300-437
Cow position: chr27:6241202-6241340 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 300-440
Cow position: chr27:6302479-6302618 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 300-440
Cow position: chr27:7412382-7412242 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 300-440
Cow position: chr27:8353465-8353328 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 300-440
Cow position: chr27:27632612-27632749 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 301-437
Cow position: chr27:16589714-16589850 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 301-439
Cow position: chr27:24305422-24305288 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 301-440
Cow position: chr27:22348478-22348339 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 301-440
Cow position: chr27:30489422-30489561 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 302-438
Cow position: chr27:18435147-18435282 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 302-440
Cow position: chr27:6319906-6319768 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 303-437
Cow position: chr27:20553721-20553584 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 303-438
Cow position: chr27:30359393-30359258 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 303-440
Cow position: chr27:6674264-6674130 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 304-433
Cow position: chr27:788812-788941 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 305-442
Cow position: chr27:15002994-15003131 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 306-440
Cow position: chr27:29493914-29494051 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 307-443
Cow position: chr27:23890920-23890784 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 307-467
Cow position: chr27:23943129-23942970 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 152, 0

Conread position: 308-432
Cow position: chr27:12710230-12710105 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 109

Conread position: 309-440
Cow position: chr27:23452441-23452311 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 313-442
Cow position: chr27:7425212-7425341 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 313-444
Cow position: chr27:13204435-13204305 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 322-440
Cow position: chr27:26323415-26323298 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 331-442
Cow position: chr27:19576365-19576476 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 334-440
Cow position: chr27:19741453-19741559 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 338-442
Cow position: chr27:21025637-21025534 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 342-445
Cow position: chr27:4398544-4398647 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.