Cow genome map
Conread name: | reep13c_k20.y1 |
Conread position: | 247-444 |
Cow position: | chr29:38978445-38978639 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 48, 39 |
Conread position: | 270-443 |
Cow position: | chr29:26275546-26275714 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 129 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 285-440 |
Cow position: | chr29:28446298-28446151 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 285-440 |
Cow position: | chr29:29176662-29176512 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 286-437 |
Cow position: | chr29:23220548-23220399 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 286-437 |
Cow position: | chr29:24578813-24578965 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 286-437 |
Cow position: | chr29:26778832-26778984 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 9, 76 |
Conread position: | 286-437 |
Cow position: | chr29:27329846-27329994 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 120 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 286-438 |
Cow position: | chr29:12626025-12625873 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 23, 13 |
Conread position: | 286-438 |
Cow position: | chr29:45005677-45005526 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 8, 61 |
Conread position: | 286-439 |
Cow position: | chr29:22613380-22613531 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 113 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 128 |
Conread position: | 286-440 |
Cow position: | chr29:4002843-4002997 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 90, 14 |
Conread position: | 286-440 |
Cow position: | chr29:4874934-4874775 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 20, 126 |
Conread position: | 286-440 |
Cow position: | chr29:5186543-5186388 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 286-440 |
Cow position: | chr29:19762224-19762373 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 286-440 |
Cow position: | chr29:20770297-20770449 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 17, 84 |
Conread position: | 286-440 |
Cow position: | chr29:22162299-22162144 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 286-440 |
Cow position: | chr29:23155181-23155331 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 125 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 286-440 |
Cow position: | chr29:25092064-25092211 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 19, 49 |
Conread position: | 286-440 |
Cow position: | chr29:28840107-28840261 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 111 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 286-440 |
Cow position: | chr29:30548727-30548881 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 286-440 |
Cow position: | chr29:34359027-34358873 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 16, 28 |
Conread position: | 286-440 |
Cow position: | chr29:41811634-41811485 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 286-441 |
Cow position: | chr29:26615768-26615611 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 86, 14 |
Conread position: | 286-441 |
Cow position: | chr29:44139292-44139138 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 286-443 |
Cow position: | chr29:18085523-18085680 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 123 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 286-443 |
Cow position: | chr29:31943818-31943976 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 113, 14 |
Conread position: | 286-448 |
Cow position: | chr29:23243926-23243765 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 287-432 |
Cow position: | chr29:23984003-23983858 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 287-436 |
Cow position: | chr29:10156350-10156205 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 10, 64 |
Conread position: | 287-438 |
Cow position: | chr29:23825260-23825107 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 287-440 |
Cow position: | chr29:8926510-8926356 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 122 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 287-440 |
Cow position: | chr29:19949260-19949412 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 20, 86 |
Conread position: | 287-440 |
Cow position: | chr29:29314700-29314543 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 287-443 |
Cow position: | chr29:5063102-5063253 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 288-432 |
Cow position: | chr29:4520292-4520433 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 14, 75 |
Conread position: | 288-437 |
Cow position: | chr29:18012510-18012660 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 288-438 |
Cow position: | chr29:41530804-41530952 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 110 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 288-440 |
Cow position: | chr29:30918503-30918654 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 21, 11 |
Conread position: | 288-440 |
Cow position: | chr29:31928942-31929092 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 288-441 |
Cow position: | chr29:40873964-40874117 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-440 |
Cow position: | chr29:25737461-25737309 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-440 |
Cow position: | chr29:40117527-40117676 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 289-442 |
Cow position: | chr29:43099790-43099639 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 290-434 |
Cow position: | chr29:1556886-1557030 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 13, 45 |
Conread position: | 292-437 |
Cow position: | chr29:27826480-27826622 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 292-439 |
Cow position: | chr29:31200215-31200362 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 293-440 |
Cow position: | chr29:29769393-29769246 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 95, 83 |
Conread position: | 295-438 |
Cow position: | chr29:13028405-13028543 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 296-440 |
Cow position: | chr29:26559282-26559141 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 297-434 |
Cow position: | chr29:12680118-12680255 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 114 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 298-443 |
Cow position: | chr29:22032678-22032532 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 104, 36 |
Conread position: | 299-440 |
Cow position: | chr29:21285324-21285464 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 299-440 |
Cow position: | chr29:34687799-34687940 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 300-440 |
Cow position: | chr29:22735140-22735003 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 300-440 |
Cow position: | chr29:29324455-29324321 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 300-441 |
Cow position: | chr29:36530832-36530973 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 301-440 |
Cow position: | chr29:4070594-4070729 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 301-440 |
Cow position: | chr29:17109927-17110062 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 115 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 301-440 |
Cow position: | chr29:36217081-36217217 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 302-442 |
Cow position: | chr29:39038302-39038162 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 302-445 |
Cow position: | chr29:26540573-26540431 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 120 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 303-439 |
Cow position: | chr29:17804503-17804638 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 303-440 |
Cow position: | chr29:7624147-7624283 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 103 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 303-440 |
Cow position: | chr29:9709662-9709800 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 303-440 |
Cow position: | chr29:32197665-32197802 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 303-453 |
Cow position: | chr29:5892813-5892963 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 304-438 |
Cow position: | chr29:31981800-31981934 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 100 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 304-439 |
Cow position: | chr29:30681741-30681607 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 304-440 |
Cow position: | chr29:9310569-9310705 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 77, 70 |
Conread position: | 306-440 |
Cow position: | chr29:32211095-32210966 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 307-439 |
Cow position: | chr29:35501682-35501549 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 308-440 |
Cow position: | chr29:17154752-17154883 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 310-438 |
Cow position: | chr29:22723576-22723704 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 310-440 |
Cow position: | chr29:41112904-41112776 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 311-440 |
Cow position: | chr29:742673-742544 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 311-442 |
Cow position: | chr29:21666063-21666194 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 312-440 |
Cow position: | chr29:7290753-7290881 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 315-440 |
Cow position: | chr29:11527809-11527687 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 320-438 |
Cow position: | chr29:9378622-9378740 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 91 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 322-440 |
Cow position: | chr29:36781317-36781199 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 325-439 |
Cow position: | chr29:19363701-19363814 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 327-439 |
Cow position: | chr29:19125314-19125426 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 342-440 |
Cow position: | chr29:17022157-17022255 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 87 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.