Cow genome map
| Conread name: | reep17c_p15.y1 |
| Conread position: | 1-137 |
| Cow position: | chr7:18260305-18260440 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-149 |
| Cow position: | chr7:15689260-15689408 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 141, 106 |
| Conread position: | 1-157 |
| Cow position: | chr7:18239988-18240144 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-219 |
| Cow position: | chr7:14722246-14722031 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 2-199 |
| Cow position: | chr7:18262820-18263017 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 138, 163 |
| Conread position: | 2-217 |
| Cow position: | chr7:18036085-18036301 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 207 |
| Conread position: | 2-219 |
| Cow position: | chr7:17075291-17075068 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 50, 174 |
| Conread position: | 2-219 |
| Cow position: | chr7:17756071-17755855 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 2-219 |
| Cow position: | chr7:17779319-17779099 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 166 |
| Conread position: | 2-219 |
| Cow position: | chr7:17855671-17855458 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 203, 143 |
| Conread position: | 2-219 |
| Cow position: | chr7:28343710-28343494 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 116 |
| Conread position: | 2-307 |
| Cow position: | chr7:18251138-18250841 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 209, 46 |
| Conread position: | 3-187 |
| Cow position: | chr7:29119946-29119755 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 171 |
| Conread position: | 3-203 |
| Cow position: | chr7:14637830-14637633 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 3-312 |
| Cow position: | chr7:10647857-10647530 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 6-142 |
| Cow position: | chr7:14582856-14582723 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-219 |
| Cow position: | chr7:17619856-17619650 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 8-176 |
| Cow position: | chr7:17625535-17625705 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 15-185 |
| Cow position: | chr7:17984887-17984720 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 15-209 |
| Cow position: | chr7:28360361-28360178 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 15-279 |
| Cow position: | chr7:28944168-28943889 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 15-395 |
| Cow position: | chr7:28963409-28963801 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 18-282 |
| Cow position: | chr7:26571544-26571820 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 20-219 |
| Cow position: | chr7:15818165-15818362 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 26-198 |
| Cow position: | chr7:11785567-11785745 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 56-185 |
| Cow position: | chr7:18051030-18051160 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 112 |
| Conread position: | 56-219 |
| Cow position: | chr7:15714664-15714500 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 56-219 |
| Cow position: | chr7:29271356-29271517 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 116-219 |
| Cow position: | chr7:18174561-18174662 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 34 |
Show alignments to all cow chromosomes.