Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-187
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 72

Conread position: 1-250
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 161, 115

Conread position: 1-252
Cow position:
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 247

Conread position: 1-255
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 103, 55

Conread position: 1-261
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 34

Conread position: 1-261
Cow position:
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-278
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 144, 10

Conread position: 1-280
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 44

Conread position: 1-280
Cow position:
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 47

Conread position: 1-282
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 120, 163

Conread position: 1-286
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 143, 102

Conread position: 1-291
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 146, 9

Conread position: 1-296
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 1-296
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 1-301
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 220

Conread position: 1-301
Cow position:
Alignm length: 319
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 55

Conread position: 1-306
Cow position:
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-325
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 42

Conread position: 1-332
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 102, 191

Conread position: 1-336
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 309

Conread position: 1-337
Cow position:
Alignm length: 355
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 146, 104

Conread position: 1-337
Cow position:
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 1-340
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 63

Conread position: 1-379
Cow position:
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 300

Conread position: 1-386
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 197

Conread position: 1-388
Cow position:
Alignm length: 416
Alignm identity: 288
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 319

Conread position: 1-388
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 248

Conread position: 1-388
Cow position:
Alignm length: 398
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 47

Conread position: 1-394
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 302

Conread position: 1-398
Cow position:
Alignm length: 418
Alignm identity: 287
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 52, 37

Conread position: 1-398
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 276

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 15

Conread position: 1-399
Cow position:
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 33

Conread position: 1-399
Cow position:
Alignm length: 413
Alignm identity: 278
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 122

Conread position: 1-399
Cow position:
Alignm length: 407
Alignm identity: 270
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 100, 214

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 276
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 233

Conread position: 1-399
Cow position:
Alignm length: 430
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 368

Conread position: 1-399
Cow position:
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 64

Conread position: 1-399
Cow position:
Alignm length: 410
Alignm identity: 275
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 17

Conread position: 1-399
Cow position:
Alignm length: 429
Alignm identity: 281
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 56

Conread position: 2-187
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 98, 82

Conread position: 2-261
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 54

Conread position: 2-261
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 60

Conread position: 2-299
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 142, 54

Conread position: 2-335
Cow position:
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 100

Conread position: 2-387
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 296

Conread position: 2-399
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 277

Conread position: 2-399
Cow position:
Alignm length: 416
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 170

Conread position: 2-399
Cow position:
Alignm length: 420
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 227

Conread position: 3-285
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 33

Conread position: 3-292
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 3-296
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 111

Conread position: 3-305
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 258

Conread position: 3-388
Cow position:
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 39

Conread position: 3-397
Cow position:
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 292

Conread position: 3-399
Cow position:
Alignm length: 427
Alignm identity: 289
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 52

Conread position: 3-399
Cow position:
Alignm length: 407
Alignm identity: 269
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 141, 53

Conread position: 3-399
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 303

Conread position: 3-399
Cow position:
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 250

Conread position: 4-286
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 52

Conread position: 4-399
Cow position:
Alignm length: 430
Alignm identity: 294
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 64, 396

Conread position: 5-399
Cow position:
Alignm length: 419
Alignm identity: 280
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 15-296
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 131, 87

Conread position: 18-286
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 82

Conread position: 23-320
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 192

Conread position: 24-274
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 73, 116

Conread position: 24-320
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 25

Conread position: 25-281
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 246

Conread position: 27-332
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 37-336
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 38

Conread position: 45-245
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 49-261
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 6

Conread position: 51-337
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 52, 242

Conread position: 51-394
Cow position:
Alignm length: 357
Alignm identity: 244
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 45, 11

Conread position: 52-399
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 50, 227

Conread position: 53-261
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 176

Conread position: 56-245
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 91, 197

Conread position: 56-295
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 166

Conread position: 56-299
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 260

Conread position: 58-268
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 204

Conread position: 58-398
Cow position:
Alignm length: 360
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 199

Conread position: 59-294
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 61-311
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 27

Conread position: 61-336
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 220

Conread position: 63-399
Cow position:
Alignm length: 354
Alignm identity: 234
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 162

Conread position: 64-279
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 158

Conread position: 64-289
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 64-296
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 80, 237

Conread position: 64-297
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 64-334
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 241

Conread position: 64-394
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 153

Conread position: 64-399
Cow position:
Alignm length: 360
Alignm identity: 252
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 64-399
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 86, 107

Conread position: 65-296
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 73

Conread position: 65-389
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 23

Conread position: 66-317
Cow position:
Alignm length: 257
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 139

Conread position: 67-296
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 36

Conread position: 69-397
Cow position:
Alignm length: 342
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 52

Conread position: 70-399
Cow position:
Alignm length: 353
Alignm identity: 252
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 74, 32

Conread position: 73-351
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 29

Conread position: 73-397
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 142

Conread position: 74-337
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 230

Conread position: 75-261
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 83

Conread position: 75-282
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 27

Conread position: 75-399
Cow position:
Alignm length: 349
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 156

Conread position: 75-399
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 76-399
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 79

Conread position: 77-337
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 147

Conread position: 80-399
Cow position:
Alignm length: 334
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 145

Conread position: 81-294
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 46

Conread position: 81-296
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 82-391
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 20

Conread position: 84-336
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 71

Conread position: 85-279
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 17

Conread position: 95-252
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 17

Conread position: 95-285
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 95-398
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 97-388
Cow position:
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 204

Conread position: 97-397
Cow position:
Alignm length: 323
Alignm identity: 211
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 104-336
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 89

Conread position: 106-292
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 108-399
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 55

Conread position: 115-398
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 40

Conread position: 145-399
Cow position:
Alignm length: 264
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 117

Conread position: 157-399
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 58

Conread position: 178-399
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 31

Conread position: 190-399
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 99

Show alignments to all cow chromosomes.