Cow genome map
| Conread name: | reje03b_g17.y1 |
| Conread position: | 1-187 |
| Cow position: | chr11:36309759-36309569 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 1-250 |
| Cow position: | chr11:22103413-22103668 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 161, 115 |
| Conread position: | 1-252 |
| Cow position: | chr11:54856285-54856549 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 247 |
| Conread position: | 1-255 |
| Cow position: | chr11:3769636-3769375 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 1-261 |
| Cow position: | chr11:31885163-31885441 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 34 |
| Conread position: | 1-261 |
| Cow position: | chr11:40467473-40467195 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-278 |
| Cow position: | chr11:35363147-35363441 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 144, 10 |
| Conread position: | 1-280 |
| Cow position: | chr11:73478274-73478564 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 1-280 |
| Cow position: | chr11:76114303-76114596 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 1-282 |
| Cow position: | chr11:18086687-18086390 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 120, 163 |
| Conread position: | 1-286 |
| Cow position: | chr11:41577354-41577063 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 143, 102 |
| Conread position: | 1-291 |
| Cow position: | chr11:17890071-17889771 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 146, 9 |
| Conread position: | 1-296 |
| Cow position: | chr11:4384281-4384581 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 1-296 |
| Cow position: | chr11:49105704-49106019 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-301 |
| Cow position: | chr11:40818994-40818673 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 104, 220 |
| Conread position: | 1-301 |
| Cow position: | chr11:77759106-77758792 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 98, 55 |
| Conread position: | 1-306 |
| Cow position: | chr11:34615919-34616241 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-325 |
| Cow position: | chr11:44642630-44642300 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 1-332 |
| Cow position: | chr11:17968925-17968590 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 102, 191 |
| Conread position: | 1-336 |
| Cow position: | chr11:62979128-62979486 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 309 |
| Conread position: | 1-337 |
| Cow position: | chr11:41239621-41239272 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 146, 104 |
| Conread position: | 1-337 |
| Cow position: | chr11:47586696-47586353 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 1-340 |
| Cow position: | chr11:81614978-81614640 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 63 |
| Conread position: | 1-379 |
| Cow position: | chr11:27386689-27386300 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 300 |
| Conread position: | 1-386 |
| Cow position: | chr11:20601890-20602273 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 197 |
| Conread position: | 1-388 |
| Cow position: | chr11:30708143-30708554 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 55, 319 |
| Conread position: | 1-388 |
| Cow position: | chr11:50236318-50235929 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 248 |
| Conread position: | 1-388 |
| Cow position: | chr11:77705415-77705800 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 1-394 |
| Cow position: | chr11:80788260-80787853 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 302 |
| Conread position: | 1-398 |
| Cow position: | chr11:29916198-29916599 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 1-398 |
| Cow position: | chr11:33350051-33349643 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 276 |
| Conread position: | 1-399 |
| Cow position: | chr11:13499666-13500074 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 1-399 |
| Cow position: | chr11:21894499-21894103 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 1-399 |
| Cow position: | chr11:33526718-33527111 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 1-399 |
| Cow position: | chr11:45282587-45282987 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 100, 214 |
| Conread position: | 1-399 |
| Cow position: | chr11:46746283-46746692 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 52, 233 |
| Conread position: | 1-399 |
| Cow position: | chr11:61454884-61454458 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 368 |
| Conread position: | 1-399 |
| Cow position: | chr11:64638872-64638467 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 1-399 |
| Cow position: | chr11:67246460-67246844 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-399 |
| Cow position: | chr11:75480384-75479965 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 2-187 |
| Cow position: | chr11:48659345-48659533 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 2-261 |
| Cow position: | chr11:34412751-34413021 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 54 |
| Conread position: | 2-261 |
| Cow position: | chr11:44818760-44819025 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 60 |
| Conread position: | 2-299 |
| Cow position: | chr11:47165482-47165180 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 2-335 |
| Cow position: | chr11:77751114-77750776 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 100 |
| Conread position: | 2-387 |
| Cow position: | chr11:23138420-23138008 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 296 |
| Conread position: | 2-399 |
| Cow position: | chr11:33413885-33414295 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 277 |
| Conread position: | 2-399 |
| Cow position: | chr11:34112915-34113324 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 170 |
| Conread position: | 2-399 |
| Cow position: | chr11:70484211-70483793 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 227 |
| Conread position: | 3-285 |
| Cow position: | chr11:85764612-85764888 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 3-292 |
| Cow position: | chr11:68571019-68570707 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 3-296 |
| Cow position: | chr11:37068651-37068355 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 111 |
| Conread position: | 3-305 |
| Cow position: | chr11:3833695-3833387 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 258 |
| Conread position: | 3-388 |
| Cow position: | chr11:26483374-26483759 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 39 |
| Conread position: | 3-397 |
| Cow position: | chr11:4731991-4732399 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 292 |
| Conread position: | 3-399 |
| Cow position: | chr11:23128899-23128481 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 72, 52 |
| Conread position: | 3-399 |
| Cow position: | chr11:35874320-35873944 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 141, 53 |
| Conread position: | 3-399 |
| Cow position: | chr11:65409509-65409095 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 61, 303 |
| Conread position: | 3-399 |
| Cow position: | chr11:69118952-69119352 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 250 |
| Conread position: | 4-286 |
| Cow position: | chr11:53130469-53130762 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 52 |
| Conread position: | 4-399 |
| Cow position: | chr11:29947283-29946855 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 64, 396 |
| Conread position: | 5-399 |
| Cow position: | chr11:38235892-38236310 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 15-296 |
| Cow position: | chr11:63847516-63847808 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 131, 87 |
| Conread position: | 18-286 |
| Cow position: | chr11:86926254-86925983 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 23-320 |
| Cow position: | chr11:43913895-43914195 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 192 |
| Conread position: | 24-274 |
| Cow position: | chr11:37752687-37752445 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 116 |
| Conread position: | 24-320 |
| Cow position: | chr11:9837427-9837118 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 25 |
| Conread position: | 25-281 |
| Cow position: | chr11:51755990-51756256 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 61, 246 |
| Conread position: | 27-332 |
| Cow position: | chr11:68910176-68909854 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 37-336 |
| Cow position: | chr11:23232826-23232520 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 45-245 |
| Cow position: | chr11:6620597-6620378 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 49-261 |
| Cow position: | chr11:25165146-25165365 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 6 |
| Conread position: | 51-337 |
| Cow position: | chr11:65857558-65857857 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 52, 242 |
| Conread position: | 51-394 |
| Cow position: | chr11:36981270-36981617 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 52-399 |
| Cow position: | chr11:85723403-85723756 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 50, 227 |
| Conread position: | 53-261 |
| Cow position: | chr11:1485658-1485432 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 176 |
| Conread position: | 56-245 |
| Cow position: | chr11:6639217-6639416 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 91, 197 |
| Conread position: | 56-295 |
| Cow position: | chr11:70609493-70609748 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 166 |
| Conread position: | 56-299 |
| Cow position: | chr11:81143855-81143587 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 260 |
| Conread position: | 58-268 |
| Cow position: | chr11:7315419-7315194 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 39, 204 |
| Conread position: | 58-398 |
| Cow position: | chr11:30720805-30721156 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 199 |
| Conread position: | 59-294 |
| Cow position: | chr11:80530079-80530327 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 61-311 |
| Cow position: | chr11:70303797-70304059 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 61-336 |
| Cow position: | chr11:8988519-8988234 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 42, 220 |
| Conread position: | 63-399 |
| Cow position: | chr11:73354343-73354001 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 64-279 |
| Cow position: | chr11:53719659-53719887 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 80, 158 |
| Conread position: | 64-289 |
| Cow position: | chr11:57111594-57111353 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 64-296 |
| Cow position: | chr11:48932869-48932625 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 80, 237 |
| Conread position: | 64-297 |
| Cow position: | chr11:74316420-74316674 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 64-334 |
| Cow position: | chr11:83066209-83066491 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 39, 241 |
| Conread position: | 64-394 |
| Cow position: | chr11:4436046-4436373 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 153 |
| Conread position: | 64-399 |
| Cow position: | chr11:2788093-2788452 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 64-399 |
| Cow position: | chr11:49148763-49149108 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 86, 107 |
| Conread position: | 65-296 |
| Cow position: | chr11:48474423-48474665 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 65-389 |
| Cow position: | chr11:30934144-30934465 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 66-317 |
| Cow position: | chr11:57062769-57063019 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 67-296 |
| Cow position: | chr11:40258681-40258448 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 69-397 |
| Cow position: | chr11:18341318-18340984 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 70-399 |
| Cow position: | chr11:62155350-62155697 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 73-351 |
| Cow position: | chr11:45646868-45646582 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 73-397 |
| Cow position: | chr11:32377910-32378244 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 142 |
| Conread position: | 74-337 |
| Cow position: | chr11:48697171-48697445 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 230 |
| Conread position: | 75-261 |
| Cow position: | chr11:48232467-48232656 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 75-282 |
| Cow position: | chr11:2281562-2281346 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 75-399 |
| Cow position: | chr11:377926-377583 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 156 |
| Conread position: | 75-399 |
| Cow position: | chr11:77745529-77745193 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 76-399 |
| Cow position: | chr11:17227914-17227586 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 77-337 |
| Cow position: | chr11:8105509-8105782 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 80-399 |
| Cow position: | chr11:19247466-19247141 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 81-294 |
| Cow position: | chr11:45898325-45898094 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 81-296 |
| Cow position: | chr11:59370745-59370976 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 82-391 |
| Cow position: | chr11:34032464-34032152 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 84-336 |
| Cow position: | chr11:30596730-30596989 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 85-279 |
| Cow position: | chr11:36799561-36799358 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 95-252 |
| Cow position: | chr11:48544189-48544351 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 95-285 |
| Cow position: | chr11:41426659-41426862 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 95-398 |
| Cow position: | chr11:45872573-45872253 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 97-388 |
| Cow position: | chr11:3726033-3726336 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 204 |
| Conread position: | 97-397 |
| Cow position: | chr11:81281692-81282014 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 104-336 |
| Cow position: | chr11:36659059-36658823 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 89 |
| Conread position: | 106-292 |
| Cow position: | chr11:62808892-62808691 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 108-399 |
| Cow position: | chr11:26144326-26144037 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 115-398 |
| Cow position: | chr11:71501357-71501074 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 145-399 |
| Cow position: | chr11:68912941-68913199 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 157-399 |
| Cow position: | chr11:36286513-36286754 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 178-399 |
| Cow position: | chr11:38874561-38874343 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 190-399 |
| Cow position: | chr11:7460763-7460556 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 99 |
Show alignments to all cow chromosomes.