Cow genome map
Conread name: | reje03b_g17.y1 |
Conread position: | 1-182 |
Cow position: | chr12:20283534-20283726 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 151 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 101, 26 |
Conread position: | 1-183 |
Cow position: | chr12:22124651-22124829 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 42, 49 |
Conread position: | 1-183 |
Cow position: | chr12:22132339-22132161 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 143 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 42, 49 |
Conread position: | 1-235 |
Cow position: | chr12:7108816-7109067 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 194 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 1-252 |
Cow position: | chr12:35311042-35310781 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 195 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 96, 222 |
Conread position: | 1-260 |
Cow position: | chr12:28011268-28010998 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 1-262 |
Cow position: | chr12:7311039-7311299 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 99, 148 |
Conread position: | 1-279 |
Cow position: | chr12:36568416-36568137 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 201 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 96, 50 |
Conread position: | 1-280 |
Cow position: | chr12:26869165-26868870 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 218 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 96, 111 |
Conread position: | 1-282 |
Cow position: | chr12:24755393-24755108 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 119 |
Conread position: | 1-286 |
Cow position: | chr12:9414135-9413852 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 95 |
Conread position: | 1-296 |
Cow position: | chr12:8172798-8173106 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 201 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1-298 |
Cow position: | chr12:7919697-7919984 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 102 |
Conread position: | 1-299 |
Cow position: | chr12:45802068-45801777 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 210 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 102, 152 |
Conread position: | 1-336 |
Cow position: | chr12:44596183-44595835 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 237 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 102, 88 |
Conread position: | 1-337 |
Cow position: | chr12:19039986-19039634 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 248 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 72, 297 |
Conread position: | 1-394 |
Cow position: | chr12:42602605-42602210 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 282 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 145, 92 |
Conread position: | 1-399 |
Cow position: | chr12:6240938-6241357 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 49 |
Conread position: | 1-399 |
Cow position: | chr12:7000973-7000566 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 117 |
Conread position: | 1-399 |
Cow position: | chr12:36501316-36500909 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 278 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 143, 78 |
Conread position: | 1-399 |
Cow position: | chr12:37770502-37770908 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 279 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 100, 291 |
Conread position: | 1-399 |
Cow position: | chr12:40910659-40910247 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 222 |
Conread position: | 1-399 |
Cow position: | chr12:42181507-42181091 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 50 |
Conread position: | 1-399 |
Cow position: | chr12:42254292-42254705 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 55 |
Conread position: | 1-399 |
Cow position: | chr12:42966632-42967033 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 267 |
Conread position: | 2-255 |
Cow position: | chr12:37123145-37123401 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 135 |
Conread position: | 2-298 |
Cow position: | chr12:41083684-41084009 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 222 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 64, 113 |
Conread position: | 2-394 |
Cow position: | chr12:15938633-15938233 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 56 |
Conread position: | 3-280 |
Cow position: | chr12:11583039-11583319 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 70 |
Conread position: | 3-291 |
Cow position: | chr12:3568583-3568879 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 215 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 100, 53 |
Conread position: | 3-292 |
Cow position: | chr12:19869105-19869406 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 44 |
Conread position: | 3-296 |
Cow position: | chr12:20326408-20326713 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 231 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 94, 35 |
Conread position: | 3-305 |
Cow position: | chr12:3039148-3039454 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 43 |
Conread position: | 3-307 |
Cow position: | chr12:16359507-16359827 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 228 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 94, 271 |
Conread position: | 3-312 |
Cow position: | chr12:3578917-3579237 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 228 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 118, 48 |
Conread position: | 3-349 |
Cow position: | chr12:18944017-18943672 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 254 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 40, 45 |
Conread position: | 3-387 |
Cow position: | chr12:18550529-18550907 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 252 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 40, 45 |
Conread position: | 3-397 |
Cow position: | chr12:19154975-19154578 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 52 |
Conread position: | 3-399 |
Cow position: | chr12:31532780-31532366 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 282 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 73, 114 |
Conread position: | 4-186 |
Cow position: | chr12:29119534-29119719 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 146 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 80, 29 |
Conread position: | 4-261 |
Cow position: | chr12:44274210-44273939 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 200 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 39, 44 |
Conread position: | 4-399 |
Cow position: | chr12:7977687-7978075 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 282 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 7, 24 |
Conread position: | 7-258 |
Cow position: | chr12:18123324-18123579 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 194 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 137, 210 |
Conread position: | 10-286 |
Cow position: | chr12:35218764-35218475 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 216 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 134, 214 |
Conread position: | 14-307 |
Cow position: | chr12:5800682-5800982 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 88 |
Conread position: | 19-394 |
Cow position: | chr12:9710556-9710175 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 264 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 52, 129 |
Conread position: | 21-282 |
Cow position: | chr12:18076187-18076460 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 201 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 82, 35 |
Conread position: | 21-386 |
Cow position: | chr12:18577497-18577864 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 244 |
Conread position: | 39-350 |
Cow position: | chr12:34385845-34385518 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 233 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 66, 186 |
Conread position: | 41-268 |
Cow position: | chr12:31925326-31925557 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 56, 5 |
Conread position: | 44-186 |
Cow position: | chr12:17486463-17486317 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 7, 16 |
Conread position: | 46-282 |
Cow position: | chr12:22261138-22260896 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 180 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 52, 101 |
Conread position: | 51-399 |
Cow position: | chr12:44622038-44622386 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 248 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 21, 114 |
Conread position: | 53-399 |
Cow position: | chr12:29995779-29995426 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 246 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 50, 247 |
Conread position: | 55-246 |
Cow position: | chr12:36954689-36954487 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 152 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 42, 6 |
Conread position: | 55-298 |
Cow position: | chr12:8869200-8868935 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 194 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 56-296 |
Cow position: | chr12:19664829-19664589 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 176 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 88, 74 |
Conread position: | 59-291 |
Cow position: | chr12:30805543-30805788 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 181 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 5, 163 |
Conread position: | 64-255 |
Cow position: | chr12:46635251-46635048 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 64-291 |
Cow position: | chr12:20479618-20479394 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 178 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 83, 38 |
Conread position: | 64-399 |
Cow position: | chr12:8943526-8943186 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 239 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 39, 76 |
Conread position: | 65-253 |
Cow position: | chr12:6687564-6687756 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 33, 157 |
Conread position: | 65-296 |
Cow position: | chr12:32391540-32391789 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 184 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 65-335 |
Cow position: | chr12:27563138-27562854 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 201 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 79, 27 |
Conread position: | 70-332 |
Cow position: | chr12:1848838-1848557 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 173 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 28, 160 |
Conread position: | 71-305 |
Cow position: | chr12:34473912-34473674 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 169 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 28, 11 |
Conread position: | 72-297 |
Cow position: | chr12:22881754-22881996 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 184 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 97, 53 |
Conread position: | 73-289 |
Cow position: | chr12:40270383-40270159 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 30, 144 |
Conread position: | 73-291 |
Cow position: | chr12:29694334-29694110 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 159 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 106, 74 |
Conread position: | 73-349 |
Cow position: | chr12:19715324-19715048 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 191 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 73, 96 |
Conread position: | 74-304 |
Cow position: | chr12:18081839-18081602 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 167 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 29, 159 |
Conread position: | 74-337 |
Cow position: | chr12:25455818-25456095 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 203 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 29, 228 |
Conread position: | 75-399 |
Cow position: | chr12:28582787-28582470 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 28, 98 |
Conread position: | 78-299 |
Cow position: | chr12:11109478-11109708 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 26, 16 |
Conread position: | 79-255 |
Cow position: | chr12:20849723-20849892 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 129 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 18, 77 |
Conread position: | 81-294 |
Cow position: | chr12:40110100-40110322 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 22, 138 |
Conread position: | 83-261 |
Cow position: | chr12:12178634-12178824 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 145 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 83-338 |
Cow position: | chr12:941345-941617 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 191 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 14, 196 |
Conread position: | 85-339 |
Cow position: | chr12:41214603-41214343 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 185 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 59, 26 |
Conread position: | 96-399 |
Cow position: | chr12:30662223-30661912 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 225 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 25, 207 |
Conread position: | 98-261 |
Cow position: | chr12:8710560-8710728 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 126 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 49, 111 |
Conread position: | 107-280 |
Cow position: | chr12:29162073-29161891 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 138 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 37, 112 |
Conread position: | 110-399 |
Cow position: | chr12:17774546-17774832 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 196 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 34, 149 |
Conread position: | 177-397 |
Cow position: | chr12:35123713-35123925 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 154 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 85, 57 |
Conread position: | 180-399 |
Cow position: | chr12:23916666-23916880 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 156 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 83, 13 |
Conread position: | 199-399 |
Cow position: | chr12:4719786-4719985 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 140 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 64, 87 |
Show alignments to all cow chromosomes.