Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-186
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 148, 101

Conread position: 1-187
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 11

Conread position: 1-231
Cow position:
Alignm length: 239
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 41

Conread position: 1-252
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 66, 86

Conread position: 1-252
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 100, 87

Conread position: 1-253
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 49

Conread position: 1-253
Cow position:
Alignm length: 267
Alignm identity: 201
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 143, 72

Conread position: 1-255
Cow position:
Alignm length: 267
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 101

Conread position: 1-261
Cow position:
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-279
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 216

Conread position: 1-282
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 232

Conread position: 1-282
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-291
Cow position:
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-293
Cow position:
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 1-296
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 282

Conread position: 1-296
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 202

Conread position: 1-297
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 46

Conread position: 1-298
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 58

Conread position: 1-299
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 295

Conread position: 1-299
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 49

Conread position: 1-307
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 1-308
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 96, 36

Conread position: 1-320
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 108, 27

Conread position: 1-323
Cow position:
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 62

Conread position: 1-329
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 92

Conread position: 1-332
Cow position:
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 169

Conread position: 1-336
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 97, 226

Conread position: 1-336
Cow position:
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 214

Conread position: 1-336
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 55

Conread position: 1-337
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 49

Conread position: 1-337
Cow position:
Alignm length: 366
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 316

Conread position: 1-351
Cow position:
Alignm length: 369
Alignm identity: 260
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 40, 53

Conread position: 1-382
Cow position:
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 93

Conread position: 1-387
Cow position:
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 93

Conread position: 1-388
Cow position:
Alignm length: 414
Alignm identity: 278
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 110, 124

Conread position: 1-397
Cow position:
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 274

Conread position: 1-397
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 26

Conread position: 1-398
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 1-399
Cow position:
Alignm length: 412
Alignm identity: 274
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 26

Conread position: 1-399
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 309

Conread position: 1-399
Cow position:
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 72

Conread position: 1-399
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 55

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 163

Conread position: 1-399
Cow position:
Alignm length: 425
Alignm identity: 278
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 41

Conread position: 2-296
Cow position:
Alignm length: 307
Alignm identity: 223
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 95, 109

Conread position: 2-336
Cow position:
Alignm length: 344
Alignm identity: 231
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 157, 101

Conread position: 2-394
Cow position:
Alignm length: 417
Alignm identity: 286
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 103, 228

Conread position: 2-399
Cow position:
Alignm length: 417
Alignm identity: 275
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 74, 87

Conread position: 3-186
Cow position:
Alignm length: 188
Alignm identity: 149
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 3-204
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 73

Conread position: 3-286
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 3-295
Cow position:
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-337
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 53

Conread position: 3-388
Cow position:
Alignm length: 405
Alignm identity: 264
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 41

Conread position: 3-394
Cow position:
Alignm length: 406
Alignm identity: 272
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 94, 60

Conread position: 3-397
Cow position:
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 45

Conread position: 3-399
Cow position:
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 216

Conread position: 3-399
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 305

Conread position: 3-399
Cow position:
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 230

Conread position: 3-399
Cow position:
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 272

Conread position: 3-399
Cow position:
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 308

Conread position: 3-399
Cow position:
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 3-399
Cow position:
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 219

Conread position: 3-399
Cow position:
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 238

Conread position: 4-288
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 241

Conread position: 4-296
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 97, 0

Conread position: 5-294
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 210

Conread position: 5-312
Cow position:
Alignm length: 343
Alignm identity: 255
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 237

Conread position: 5-399
Cow position:
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 264

Conread position: 9-399
Cow position:
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 209

Conread position: 12-296
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 35

Conread position: 17-302
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 87

Conread position: 21-294
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 27

Conread position: 22-261
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 23-261
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 36, 223

Conread position: 24-261
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 53

Conread position: 25-261
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 119, 31

Conread position: 39-252
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 205

Conread position: 43-333
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 66

Conread position: 46-296
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 101

Conread position: 50-394
Cow position:
Alignm length: 372
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 252

Conread position: 51-186
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 51

Conread position: 51-190
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 51-282
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 64

Conread position: 51-341
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 168

Conread position: 51-399
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 241

Conread position: 54-398
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 10, 81

Conread position: 56-281
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 0

Conread position: 56-299
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 47, 22

Conread position: 57-297
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 57-319
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 75

Conread position: 59-261
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 59-399
Cow position:
Alignm length: 354
Alignm identity: 227
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 5, 19

Conread position: 63-399
Cow position:
Alignm length: 348
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 155

Conread position: 64-186
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 64-336
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 48

Conread position: 64-399
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 240

Conread position: 64-399
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 234

Conread position: 64-399
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 251

Conread position: 65-255
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 173

Conread position: 65-262
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 59

Conread position: 65-279
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 79, 217

Conread position: 65-294
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 12

Conread position: 65-336
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 65-336
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 66-336
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 233

Conread position: 67-399
Cow position:
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 158

Conread position: 68-399
Cow position:
Alignm length: 350
Alignm identity: 242
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 73, 154

Conread position: 69-261
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 19

Conread position: 69-295
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 152

Conread position: 71-346
Cow position:
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 210

Conread position: 71-397
Cow position:
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 21

Conread position: 72-296
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 72, 30

Conread position: 73-278
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 144

Conread position: 73-291
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 115, 84

Conread position: 73-295
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 19

Conread position: 73-296
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 141

Conread position: 73-304
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 149

Conread position: 76-399
Cow position:
Alignm length: 351
Alignm identity: 248
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 53

Conread position: 77-337
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 236

Conread position: 77-399
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 70

Conread position: 79-399
Cow position:
Alignm length: 336
Alignm identity: 230
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 65, 222

Conread position: 80-292
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 23

Conread position: 81-287
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 6

Conread position: 82-261
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 83-296
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 7

Conread position: 85-296
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 86-399
Cow position:
Alignm length: 330
Alignm identity: 216
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 212

Conread position: 92-399
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 11, 126

Conread position: 97-340
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 208

Conread position: 97-399
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 201

Conread position: 100-398
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 192

Conread position: 112-399
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 197

Conread position: 119-399
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 205

Conread position: 121-399
Cow position:
Alignm length: 287
Alignm identity: 188
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 92

Conread position: 127-399
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 101

Conread position: 135-399
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 83

Conread position: 144-337
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.