Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-158
Cow position: chr14:40777650-40777804 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 42

Conread position: 1-186
Cow position: chr14:19513014-19513192 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 30

Conread position: 1-186
Cow position: chr14:23080151-23080338 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 102, 55

Conread position: 1-188
Cow position: chr14:13297066-13296875 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-225
Cow position: chr14:13634332-13634574 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 45

Conread position: 1-248
Cow position: chr14:1796665-1796405 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 214

Conread position: 1-252
Cow position: chr14:9029309-9029566 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 51

Conread position: 1-252
Cow position: chr14:26859373-26859618 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 135, 101

Conread position: 1-261
Cow position: chr14:20467739-20468006 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 96, 135

Conread position: 1-262
Cow position: chr14:6490328-6490605 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-278
Cow position: chr14:12483937-12484218 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 110

Conread position: 1-289
Cow position: chr14:50589034-50589313 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 64

Conread position: 1-294
Cow position: chr14:6418944-6419238 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 91

Conread position: 1-294
Cow position: chr14:41756632-41756325 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 1-294
Cow position: chr14:50027579-50027286 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 55

Conread position: 1-295
Cow position: chr14:20600755-20600453 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 218

Conread position: 1-296
Cow position: chr14:33828518-33828225 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 48

Conread position: 1-296
Cow position: chr14:38921307-38921015 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 42

Conread position: 1-299
Cow position: chr14:7960134-7959839 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 27, 46

Conread position: 1-300
Cow position: chr14:45605463-45605152 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 300

Conread position: 1-310
Cow position: chr14:33538555-33538872 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 85

Conread position: 1-333
Cow position: chr14:11982027-11981669 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 309

Conread position: 1-334
Cow position: chr14:8754697-8754350 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 8

Conread position: 1-334
Cow position: chr14:43046515-43046180 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 42

Conread position: 1-337
Cow position: chr14:24581309-24580956 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 76, 277

Conread position: 1-337
Cow position: chr14:24683765-24684104 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 55

Conread position: 1-337
Cow position: chr14:24992186-24991850 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 212

Conread position: 1-337
Cow position: chr14:38295918-38296254 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 96, 53

Conread position: 1-339
Cow position: chr14:40346804-40347135 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 168

Conread position: 1-387
Cow position: chr14:20016334-20016729 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 45

Conread position: 1-388
Cow position: chr14:19863074-19863456 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 36

Conread position: 1-394
Cow position: chr14:6599579-6599986 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 55

Conread position: 1-397
Cow position: chr14:37883543-37883948 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 268

Conread position: 1-398
Cow position: chr14:20009944-20010344 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 269
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 95, 76

Conread position: 1-399
Cow position: chr14:9020396-9019992 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 272
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 35

Conread position: 1-399
Cow position: chr14:25403573-25403969 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 12

Conread position: 1-399
Cow position: chr14:39618011-39618410 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 96, 42

Conread position: 2-291
Cow position: chr14:33247053-33247364 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 218

Conread position: 2-296
Cow position: chr14:12249824-12250133 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 223

Conread position: 2-299
Cow position: chr14:19222254-19221942 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 102

Conread position: 2-359
Cow position: chr14:31734483-31734849 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 54

Conread position: 3-261
Cow position: chr14:27254420-27254155 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 130

Conread position: 3-299
Cow position: chr14:13006876-13006566 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 110

Conread position: 3-351
Cow position: chr14:27591577-27591943 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 47

Conread position: 3-388
Cow position: chr14:15271718-15271322 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 258
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 142, 110

Conread position: 6-387
Cow position: chr14:18308941-18309328 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 214

Conread position: 8-349
Cow position: chr14:21284994-21284640 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 12-398
Cow position: chr14:41809289-41809686 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 143

Conread position: 15-261
Cow position: chr14:42625827-42625579 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 131, 221

Conread position: 15-279
Cow position: chr14:19633540-19633260 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 58

Conread position: 17-261
Cow position: chr14:46965918-46965661 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 18-189
Cow position: chr14:36585603-36585777 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 47

Conread position: 25-394
Cow position: chr14:7291141-7290771 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 247
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 29

Conread position: 28-253
Cow position: chr14:25695727-25695490 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 67, 0

Conread position: 34-273
Cow position: chr14:39519036-39518782 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 113, 190

Conread position: 44-261
Cow position: chr14:37108580-37108806 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 196

Conread position: 46-261
Cow position: chr14:11641247-11641468 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 25

Conread position: 51-350
Cow position: chr14:24237142-24236840 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 93, 51

Conread position: 51-399
Cow position: chr14:24981781-24981425 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 108

Conread position: 52-337
Cow position: chr14:49086626-49086334 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 92, 50

Conread position: 56-181
Cow position: chr14:20826316-20826179 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 56-296
Cow position: chr14:22967070-22966818 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 91, 166

Conread position: 59-320
Cow position: chr14:13810255-13809979 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 166

Conread position: 63-394
Cow position: chr14:5221975-5222320 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 228

Conread position: 64-296
Cow position: chr14:11748611-11748847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 80, 154

Conread position: 64-296
Cow position: chr14:44878475-44878722 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 237

Conread position: 64-336
Cow position: chr14:23712997-23712717 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 202

Conread position: 65-293
Cow position: chr14:3564583-3564348 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 59

Conread position: 66-394
Cow position: chr14:19593831-19594166 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 182

Conread position: 67-399
Cow position: chr14:39433956-39434292 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 26

Conread position: 68-280
Cow position: chr14:14466172-14466391 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 199

Conread position: 68-315
Cow position: chr14:15518072-15518333 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 21

Conread position: 69-261
Cow position: chr14:36709428-36709222 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 196

Conread position: 69-286
Cow position: chr14:38143808-38144035 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 75, 176

Conread position: 69-302
Cow position: chr14:4109167-4109415 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 197

Conread position: 72-302
Cow position: chr14:15913251-15913491 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 30

Conread position: 73-255
Cow position: chr14:34330841-34330652 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 145

Conread position: 73-285
Cow position: chr14:33209057-33209275 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 24, 148

Conread position: 73-335
Cow position: chr14:14187635-14187360 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 232

Conread position: 73-336
Cow position: chr14:41128192-41127926 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 29

Conread position: 73-387
Cow position: chr14:25231347-25231672 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 27, 148

Conread position: 74-394
Cow position: chr14:32452562-32452220 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 247

Conread position: 75-296
Cow position: chr14:19624390-19624149 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 154

Conread position: 75-399
Cow position: chr14:1868108-1868417 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 76-397
Cow position: chr14:19850733-19851058 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 120

Conread position: 77-261
Cow position: chr14:11819826-11820021 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 77-296
Cow position: chr14:12613805-12614030 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 98, 82

Conread position: 77-394
Cow position: chr14:49929437-49929773 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 238

Conread position: 77-399
Cow position: chr14:48740588-48740903 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 55

Conread position: 78-319
Cow position: chr14:15033053-15032801 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 141

Conread position: 80-399
Cow position: chr14:10858726-10858399 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 212

Conread position: 83-336
Cow position: chr14:41716399-41716146 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 104

Conread position: 86-261
Cow position: chr14:8006049-8006225 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 33

Conread position: 91-399
Cow position: chr14:6541438-6541758 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 208

Conread position: 92-289
Cow position: chr14:24786215-24786012 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 108

Conread position: 95-388
Cow position: chr14:11043210-11043514 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 156

Conread position: 96-293
Cow position: chr14:34355424-34355627 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 76, 110

Conread position: 96-399
Cow position: chr14:19129789-19129472 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 48, 129

Conread position: 97-399
Cow position: chr14:36289539-36289832 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 67, 45

Conread position: 127-279
Cow position: chr14:33643544-33643701 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 72

Conread position: 130-299
Cow position: chr14:42277182-42277006 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 53

Conread position: 143-399
Cow position: chr14:26490516-26490778 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 64

Conread position: 144-341
Cow position: chr14:37435069-37435279 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 106

Conread position: 178-398
Cow position: chr14:14949028-14949246 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 101

Conread position: 179-398
Cow position: chr14:25682112-25681894 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 110

Show alignments to all cow chromosomes.