Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-163
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 133

Conread position: 1-248
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 65, 228

Conread position: 1-253
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 103, 0

Conread position: 1-260
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 63

Conread position: 1-261
Cow position:
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-261
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 191

Conread position: 1-261
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 217

Conread position: 1-271
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 262

Conread position: 1-282
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 96, 127

Conread position: 1-289
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 36

Conread position: 1-291
Cow position:
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 33

Conread position: 1-293
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 82

Conread position: 1-296
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 54

Conread position: 1-297
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 96, 125

Conread position: 1-312
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 116

Conread position: 1-320
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 103, 118

Conread position: 1-335
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 75

Conread position: 1-337
Cow position:
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 300

Conread position: 1-337
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 67, 153

Conread position: 1-387
Cow position:
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 41

Conread position: 1-392
Cow position:
Alignm length: 410
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 45

Conread position: 1-394
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 54

Conread position: 1-397
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 390

Conread position: 1-397
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 96, 200

Conread position: 1-398
Cow position:
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 130

Conread position: 1-398
Cow position:
Alignm length: 410
Alignm identity: 277
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 87

Conread position: 1-398
Cow position:
Alignm length: 415
Alignm identity: 281
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 102, 54

Conread position: 1-398
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 217

Conread position: 1-399
Cow position:
Alignm length: 414
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 247

Conread position: 1-399
Cow position:
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 292

Conread position: 1-399
Cow position:
Alignm length: 418
Alignm identity: 283
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 100, 42

Conread position: 1-399
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 308

Conread position: 1-399
Cow position:
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 77

Conread position: 1-399
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 49

Conread position: 1-399
Cow position:
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 1-399
Cow position:
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 264

Conread position: 1-399
Cow position:
Alignm length: 407
Alignm identity: 278
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 143, 91

Conread position: 1-399
Cow position:
Alignm length: 420
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 295

Conread position: 2-232
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 39

Conread position: 2-278
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 71

Conread position: 2-296
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 46

Conread position: 2-320
Cow position:
Alignm length: 334
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 152, 62

Conread position: 2-337
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 142, 219

Conread position: 2-397
Cow position:
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 100

Conread position: 2-398
Cow position:
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 273

Conread position: 2-399
Cow position:
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 28

Conread position: 3-252
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 3-296
Cow position:
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 101

Conread position: 3-299
Cow position:
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 53

Conread position: 3-333
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 52, 147

Conread position: 3-335
Cow position:
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 45

Conread position: 3-399
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 9-296
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 94, 48

Conread position: 14-299
Cow position:
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 22

Conread position: 16-252
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 87, 95

Conread position: 16-387
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 57, 78

Conread position: 19-336
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 84, 206

Conread position: 20-366
Cow position:
Alignm length: 369
Alignm identity: 251
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 77, 8

Conread position: 21-178
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 81

Conread position: 21-282
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 25-294
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 28-299
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 8

Conread position: 37-336
Cow position:
Alignm length: 317
Alignm identity: 223
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 109, 18

Conread position: 47-319
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 56, 197

Conread position: 49-187
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 51-399
Cow position:
Alignm length: 354
Alignm identity: 245
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 46, 162

Conread position: 52-290
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 172

Conread position: 54-241
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 55-279
Cow position:
Alignm length: 237
Alignm identity: 183
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 89, 0

Conread position: 56-383
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 46

Conread position: 58-398
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 239

Conread position: 59-394
Cow position:
Alignm length: 355
Alignm identity: 237
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 42

Conread position: 59-398
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 5, 241

Conread position: 63-255
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 167

Conread position: 63-296
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 104, 25

Conread position: 63-399
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 39

Conread position: 64-294
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 180

Conread position: 64-336
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 152

Conread position: 64-337
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 231

Conread position: 64-399
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 235

Conread position: 65-296
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 65-296
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 28

Conread position: 65-399
Cow position:
Alignm length: 348
Alignm identity: 243
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 23, 67

Conread position: 67-291
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 67-296
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 154

Conread position: 67-399
Cow position:
Alignm length: 352
Alignm identity: 243
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 83, 157

Conread position: 69-399
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 154

Conread position: 73-261
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 73-285
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 152

Conread position: 73-286
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 146

Conread position: 73-296
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 73-296
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 29

Conread position: 74-398
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 166

Conread position: 74-399
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 154

Conread position: 77-399
Cow position:
Alignm length: 347
Alignm identity: 234
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 19

Conread position: 81-286
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 5, 32

Conread position: 81-399
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 22, 108

Conread position: 83-399
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 219

Conread position: 84-280
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 142

Conread position: 87-260
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 127

Conread position: 88-399
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 215

Conread position: 89-336
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 126

Conread position: 95-285
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 96-337
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 169

Conread position: 96-399
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 209

Conread position: 97-399
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 198

Conread position: 98-399
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 119

Conread position: 115-399
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 112

Conread position: 116-399
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 33

Conread position: 118-399
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 188

Conread position: 177-394
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 104

Conread position: 178-398
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 101

Conread position: 180-399
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 81, 19

Conread position: 180-399
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 29

Conread position: 180-399
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 36

Show alignments to all cow chromosomes.