Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-187
Cow position:
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 102, 24

Conread position: 1-190
Cow position:
Alignm length: 195
Alignm identity: 156
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 1-250
Cow position:
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 55

Conread position: 1-250
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 179

Conread position: 1-261
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 1-261
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 85

Conread position: 1-261
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 104, 33

Conread position: 1-261
Cow position:
Alignm length: 274
Alignm identity: 199
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 146, 72

Conread position: 1-263
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 263

Conread position: 1-282
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 1-282
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 1-282
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 76, 93

Conread position: 1-291
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 102, 260

Conread position: 1-293
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 224

Conread position: 1-293
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 51

Conread position: 1-296
Cow position:
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 263

Conread position: 1-296
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 71

Conread position: 1-298
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-299
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 55

Conread position: 1-300
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 153

Conread position: 1-306
Cow position:
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 73

Conread position: 1-312
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 279

Conread position: 1-335
Cow position:
Alignm length: 346
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 55

Conread position: 1-336
Cow position:
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 47

Conread position: 1-336
Cow position:
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 100

Conread position: 1-336
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 154, 55

Conread position: 1-337
Cow position:
Alignm length: 355
Alignm identity: 241
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 97, 48

Conread position: 1-337
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 61

Conread position: 1-350
Cow position:
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 298

Conread position: 1-388
Cow position:
Alignm length: 396
Alignm identity: 264
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 143, 55

Conread position: 1-394
Cow position:
Alignm length: 409
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 222

Conread position: 1-397
Cow position:
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 63

Conread position: 1-398
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 47

Conread position: 1-399
Cow position:
Alignm length: 418
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 0

Conread position: 1-399
Cow position:
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 162

Conread position: 1-399
Cow position:
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 162

Conread position: 1-399
Cow position:
Alignm length: 410
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 275

Conread position: 1-399
Cow position:
Alignm length: 422
Alignm identity: 296
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 42

Conread position: 1-399
Cow position:
Alignm length: 406
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 1-399
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 24

Conread position: 1-399
Cow position:
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 55

Conread position: 1-399
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 220

Conread position: 2-300
Cow position:
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 2-336
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 23

Conread position: 2-337
Cow position:
Alignm length: 359
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 311

Conread position: 2-388
Cow position:
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 262

Conread position: 2-394
Cow position:
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 387

Conread position: 2-399
Cow position:
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 103

Conread position: 2-399
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 294

Conread position: 2-399
Cow position:
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 289

Conread position: 3-185
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 141, 43

Conread position: 3-293
Cow position:
Alignm length: 306
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 144, 33

Conread position: 3-296
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 40

Conread position: 3-299
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 56

Conread position: 3-336
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 64

Conread position: 3-390
Cow position:
Alignm length: 396
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 100, 206

Conread position: 3-393
Cow position:
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 159

Conread position: 3-394
Cow position:
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 317

Conread position: 3-398
Cow position:
Alignm length: 409
Alignm identity: 281
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 100, 134

Conread position: 3-398
Cow position:
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 53

Conread position: 3-399
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 25

Conread position: 3-399
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 134

Conread position: 3-399
Cow position:
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 30

Conread position: 3-399
Cow position:
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 302

Conread position: 3-399
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 45

Conread position: 5-388
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 92, 47

Conread position: 5-399
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 44

Conread position: 6-280
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 138, 50

Conread position: 7-278
Cow position:
Alignm length: 286
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 153, 127

Conread position: 9-397
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 211

Conread position: 15-399
Cow position:
Alignm length: 403
Alignm identity: 276
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 89

Conread position: 16-399
Cow position:
Alignm length: 403
Alignm identity: 278
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 286

Conread position: 21-280
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 123, 80

Conread position: 21-397
Cow position:
Alignm length: 394
Alignm identity: 262
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 126, 66

Conread position: 22-336
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 77, 32

Conread position: 26-341
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 193

Conread position: 41-333
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 61

Conread position: 46-399
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 250

Conread position: 56-278
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 90, 46

Conread position: 56-336
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 41, 14

Conread position: 59-300
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 189

Conread position: 64-331
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 232

Conread position: 64-336
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 65

Conread position: 64-349
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 78, 226

Conread position: 64-386
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 64-399
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 38

Conread position: 64-399
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 214

Conread position: 65-299
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 84

Conread position: 65-336
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 23

Conread position: 66-398
Cow position:
Alignm length: 364
Alignm identity: 243
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 240

Conread position: 67-252
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 180

Conread position: 67-286
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 89

Conread position: 67-294
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 35

Conread position: 67-305
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 19

Conread position: 68-368
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 108, 82

Conread position: 71-261
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 72-399
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 32, 66

Conread position: 73-234
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 103, 23

Conread position: 73-279
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 147

Conread position: 73-296
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 72, 19

Conread position: 74-261
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 145

Conread position: 75-296
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 77-181
Cow position:
Alignm length: 109
Alignm identity: 95
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 77-295
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 7

Conread position: 81-355
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 113

Conread position: 84-296
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 139

Conread position: 85-399
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 212

Conread position: 94-399
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 132

Conread position: 96-333
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 24

Conread position: 96-376
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 119

Conread position: 96-397
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 211

Conread position: 97-294
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 191

Conread position: 98-300
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 100-399
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 140

Conread position: 108-336
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 113-394
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 183

Conread position: 119-399
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 175

Conread position: 122-291
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 122-394
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 176

Conread position: 128-399
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 96

Conread position: 144-293
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 155

Conread position: 145-399
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 68

Conread position: 151-399
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 62

Conread position: 180-399
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 14

Conread position: 180-399
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 28

Conread position: 186-399
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 25

Show alignments to all cow chromosomes.