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Cow genome map

           
Conread name:
           
reje03b_g17.y1
        

               
Conread position:
               
1-252
               

               
Cow position:
               
chr2:44065262-44065523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 221
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:8505487-8505759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
96, 244
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:16692827-16693096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:23712561-23712826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
85, 103
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:47105259-47104978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:53574779-53575044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:57776019-57776295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:84996987-84997263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr2:8295504-8295789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr2:38659107-38658816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
153, 13
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr2:28637612-28637321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 242
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:81927523-81927822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr2:21415984-21416274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr2:12185698-12185991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr2:58248195-58247897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 72
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr2:24270894-24271208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr2:40691157-40691466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr2:9687894-9687594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr2:41019522-41019232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr2:52386252-52385937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 227
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr2:47066910-47066597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 304
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr2:45259406-45259098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 255
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr2:46312121-46312439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
139, 177
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr2:13342310-13341990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 244
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr2:71164051-71163724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 172
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr2:22372274-22371955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 63
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr2:21356175-21355840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr2:35093009-35092681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr2:65604257-65603908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 237
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr2:56102796-56102440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 92
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr2:36007903-36007571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 55
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr2:68110072-68109675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr2:21714298-21714698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr2:47048080-47047686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr2:70895700-70896109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr2:15298211-15298614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 154
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr2:36077018-36077428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
146, 102
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr2:36104926-36105346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr2:49608261-49608668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
146, 88
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr2:65270024-65269614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 92
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr2:76340996-76340575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 302
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:22069-21660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 305
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:6038677-6039090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:7524466-7524055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 87
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:14710451-14710043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 237
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:17940616-17940211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:19212373-19211978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:20900799-20900386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 229
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:28820034-28820441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 81
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:29268734-29269149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 89
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:32264733-32264315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 305
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:32432061-32431659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 179
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:33262946-33262539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 133
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:39263160-39263564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:40728038-40728427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:44081119-44081513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 163
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:45912965-45912555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:56351246-56350840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 81
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:65931643-65932042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:69251008-69250592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 305
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:69676865-69676454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 300
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:70945069-70945481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:72527625-72528037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr2:12736405-12736218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
144, 111
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr2:32406345-32406642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr2:70674408-70674706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr2:45623697-45623994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr2:60470853-60471187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 305
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr2:82581259-82580851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr2:76969504-76969240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr2:14853995-14854276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
147, 124
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr2:15571860-15571566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 263
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr2:6883899-6884195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr2:45439130-45439419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr2:27178322-27178716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr2:69581835-69581511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
140, 89
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr2:26555908-26555626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr2:44482972-44482669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 218
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr2:48069725-48069415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr2:16514463-16514811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr2:38273214-38273616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr2:28302998-28303396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
6-245
               

               
Cow position:
               
chr2:8575280-8575041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr2:22125618-22125265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr2:41710564-41710799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr2:81388367-81388767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr2:18858459-18858072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 180
               

               
Conread position:
               
8-399
               

               
Cow position:
               
chr2:42255108-42255512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 221
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr2:1211090-1210784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr2:46201951-46202250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
12-296
               

               
Cow position:
               
chr2:13543709-13544004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
12-398
               

               
Cow position:
               
chr2:33402808-33402410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 263
               

               
Conread position:
               
22-299
               

               
Cow position:
               
chr2:78116661-78116365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
34-273
               

               
Cow position:
               
chr2:73985318-73985060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 195
               

               
Conread position:
               
34-296
               

               
Cow position:
               
chr2:74031285-74031005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
69, 195
               

               
Conread position:
               
36-296
               

               
Cow position:
               
chr2:45554020-45554294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
40-394
               

               
Cow position:
               
chr2:46344391-46344763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 191
               

               
Conread position:
               
46-391
               

               
Cow position:
               
chr2:74353611-74353968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
47-399
               

               
Cow position:
               
chr2:70703970-70704335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
49-286
               

               
Cow position:
               
chr2:53430449-53430697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
51-261
               

               
Cow position:
               
chr2:68084234-68084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 191
               

               
Conread position:
               
55-276
               

               
Cow position:
               
chr2:485342-485577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
56-186
               

               
Cow position:
               
chr2:43123043-43123179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
56-399
               

               
Cow position:
               
chr2:42607796-42608143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 161
               

               
Conread position:
               
58-399
               

               
Cow position:
               
chr2:39584180-39584526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
59-259
               

               
Cow position:
               
chr2:41949751-41949968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr2:46244298-46244003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 238
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr2:34535438-34535087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 249
               

               
Conread position:
               
63-304
               

               
Cow position:
               
chr2:77359222-77359466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
63-388
               

               
Cow position:
               
chr2:28257209-28257531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
64-261
               

               
Cow position:
               
chr2:14349528-14349727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
64-261
               

               
Cow position:
               
chr2:64830588-64830790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
64-281
               

               
Cow position:
               
chr2:70746530-70746762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr2:27173100-27173339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
64-292
               

               
Cow position:
               
chr2:25928186-25928432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 212
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr2:2688906-2689149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr2:16422287-16422539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
64-304
               

               
Cow position:
               
chr2:32403231-32402986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
64-325
               

               
Cow position:
               
chr2:51824661-51824928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
64-387
               

               
Cow position:
               
chr2:4273537-4273200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
65-325
               

               
Cow position:
               
chr2:66615186-66614905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 236
               

               
Conread position:
               
65-337
               

               
Cow position:
               
chr2:1755771-1756056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
65-399
               

               
Cow position:
               
chr2:46033072-46033412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
66-383
               

               
Cow position:
               
chr2:51594500-51594826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 238
               

               
Conread position:
               
67-399
               

               
Cow position:
               
chr2:46745658-46746000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 147
               

               
Conread position:
               
67-399
               

               
Cow position:
               
chr2:66480437-66480109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
68-261
               

               
Cow position:
               
chr2:25283547-25283756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 158
               

               
Conread position:
               
69-336
               

               
Cow position:
               
chr2:45469742-45470021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
71-260
               

               
Cow position:
               
chr2:34492184-34492375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
71-282
               

               
Cow position:
               
chr2:11616839-11617063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
71-292
               

               
Cow position:
               
chr2:28319102-28318879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
71-399
               

               
Cow position:
               
chr2:15597723-15597402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
73-261
               

               
Cow position:
               
chr2:32489657-32489468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
73-296
               

               
Cow position:
               
chr2:32408733-32408513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
73-325
               

               
Cow position:
               
chr2:46995010-46994753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
73-337
               

               
Cow position:
               
chr2:59906286-59906027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
73-339
               

               
Cow position:
               
chr2:55480496-55480221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
73-377
               

               
Cow position:
               
chr2:45881025-45880721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
73-398
               

               
Cow position:
               
chr2:13354417-13354752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
73-399
               

               
Cow position:
               
chr2:76110137-76110473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 230
               

               
Conread position:
               
75-183
               

               
Cow position:
               
chr2:46153462-46153354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
75-291
               

               
Cow position:
               
chr2:80797419-80797643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
75-296
               

               
Cow position:
               
chr2:41185215-41185449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
75-351
               

               
Cow position:
               
chr2:80839386-80839101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
76-282
               

               
Cow position:
               
chr2:6282265-6282050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
77-261
               

               
Cow position:
               
chr2:37347546-37347741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
77-399
               

               
Cow position:
               
chr2:45665779-45666110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
78-398
               

               
Cow position:
               
chr2:66404181-66403855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 188
               

               
Conread position:
               
79-276
               

               
Cow position:
               
chr2:36630717-36630932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
80-397
               

               
Cow position:
               
chr2:73353537-73353867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 226
               

               
Conread position:
               
82-335
               

               
Cow position:
               
chr2:44551083-44550828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
83-280
               

               
Cow position:
               
chr2:14396487-14396279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr2:6697737-6697515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr2:46194548-46194775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
86-398
               

               
Cow position:
               
chr2:82262624-82262300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 181
               

               
Conread position:
               
87-261
               

               
Cow position:
               
chr2:80904169-80903986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
88-391
               

               
Cow position:
               
chr2:74249470-74249159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 186
               

               
Conread position:
               
89-294
               

               
Cow position:
               
chr2:62644357-62644565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
90-296
               

               
Cow position:
               
chr2:46020668-46020885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
93-293
               

               
Cow position:
               
chr2:38272392-38272190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
7, 94
               

               
Conread position:
               
94-399
               

               
Cow position:
               
chr2:80963881-80963573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr2:69770269-69770519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 169
               

               
Conread position:
               
97-394
               

               
Cow position:
               
chr2:81349118-81348805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 204
               

               
Conread position:
               
97-398
               

               
Cow position:
               
chr2:33532181-33531872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 189
               

               
Conread position:
               
98-277
               

               
Cow position:
               
chr2:6232387-6232570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
98-399
               

               
Cow position:
               
chr2:26806346-26806040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
99-398
               

               
Cow position:
               
chr2:44229921-44229618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
99-399
               

               
Cow position:
               
chr2:25597721-25597418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chr2:55960834-55960639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
106-295
               

               
Cow position:
               
chr2:60463040-60462843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
106-295
               

               
Cow position:
               
chr2:60468419-60468222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
108-398
               

               
Cow position:
               
chr2:68970511-68970815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 186
               

               
Conread position:
               
119-297
               

               
Cow position:
               
chr2:19294390-19294573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
128-399
               

               
Cow position:
               
chr2:43907372-43907112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
143-391
               

               
Cow position:
               
chr2:26170563-26170814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr2:17328566-17328827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr2:26850979-26851240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 158
               

               
Conread position:
               
180-399
               

               
Cow position:
               
chr2:69367267-69367050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
189-399
               

               
Cow position:
               
chr2:58135524-58135315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 20
               
Show alignments to all cow chromosomes.