Cow genome map


           Conread name:
           reje03b_g17.y1
        

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               143, 112
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 116
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 55
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               109, 120
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 41
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               146, 47
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               66, 234
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               144, 42
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               261, 24
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               143, 92
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 306
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               146, 101
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               97, 13
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 220
               

               Conread position:
               1-352
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               145, 55
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 89
               

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               145, 285
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               283
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 116
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 265
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 43
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 101
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 57
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 101
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               96, 48
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 301
               

               Conread position:
               2-228
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               2-252
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 26
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               103, 222
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               2-308
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               101, 290
               

               Conread position:
               2-399
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 260
               

               Conread position:
               3-260
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               144, 7
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 53
               

               Conread position:
               3-304
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               3-388
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 140
               

               Conread position:
               3-393
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               3-397
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               3-399
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               62, 290
               

               Conread position:
               3-399
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 47
               

               Conread position:
               5-261
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               95, 254
               

               Conread position:
               6-316
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 63
               

               Conread position:
               14-317
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               130, 92
               

               Conread position:
               15-187
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 116
               

               Conread position:
               15-296
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               83, 49
               

               Conread position:
               18-386
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               264
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               126, 76
               

               Conread position:
               21-244
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               84, 187
               

               Conread position:
               21-296
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               23-325
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               121, 65
               

               Conread position:
               26-350
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 181
               

               Conread position:
               39-248
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               48-280
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               57-398
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               46, 245
               

               Conread position:
               58-394
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               63-292
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               63-388
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               64-399
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               39, 261
               

               Conread position:
               65-258
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               5, 153
               

               Conread position:
               65-289
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 202
               

               Conread position:
               65-350
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 241
               

               Conread position:
               66-318
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               67-291
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               10, 154
               

               Conread position:
               67-399
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               69-399
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               75, 232
               

               Conread position:
               71-233
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               73-272
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               73-278
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               73-280
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               73-281
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               73-296
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               75-280
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               75-295
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               75-296
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               75-399
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 235
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               78-278
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               78-337
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 193
               

               Conread position:
               79-259
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               79-399
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 242
               

               Conread position:
               80-299
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               82-399
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 216
               

               Conread position:
               85-383
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               178, 5
               

               Conread position:
               91-336
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               96-399
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 206
               

               Conread position:
               104-336
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 6
               

               Conread position:
               110-337
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               114-399
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 180
               

               Conread position:
               119-399
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               25, 99
               

               Conread position:
               124-398
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               22, 143
               

               Conread position:
               144-399
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 77
               

               Conread position:
               185-399
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 109
               
Show alignments to all cow chromosomes.