Cow genome map
| Conread name: | reje03b_g17.y1 |
| Conread position: | 1-176 |
| Cow position: | chr21:17452281-17452103 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 1-186 |
| Cow position: | chr21:17282436-17282625 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-231 |
| Cow position: | chr21:21964763-21964995 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 184, 55 |
| Conread position: | 1-244 |
| Cow position: | chr21:31158988-31159250 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 1-253 |
| Cow position: | chr21:4428421-4428679 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 208 |
| Conread position: | 1-261 |
| Cow position: | chr21:28512274-28512533 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 1-261 |
| Cow position: | chr21:33419983-33419719 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 192 |
| Conread position: | 1-261 |
| Cow position: | chr21:38867834-38867568 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 1-261 |
| Cow position: | chr21:41957441-41957172 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 1-261 |
| Cow position: | chr21:45151898-45151615 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-271 |
| Cow position: | chr21:4080087-4080376 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 110 |
| Conread position: | 1-276 |
| Cow position: | chr21:32237033-32237317 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 55 |
| Conread position: | 1-279 |
| Cow position: | chr21:32535711-32536000 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 1-290 |
| Cow position: | chr21:48484707-48484411 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 63 |
| Conread position: | 1-291 |
| Cow position: | chr21:20925772-20925469 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 1-291 |
| Cow position: | chr21:41974646-41974338 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-295 |
| Cow position: | chr21:17434587-17434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 1-296 |
| Cow position: | chr21:5137774-5137443 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-296 |
| Cow position: | chr21:21480446-21480141 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 143, 102 |
| Conread position: | 1-296 |
| Cow position: | chr21:33562747-33563051 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 1-296 |
| Cow position: | chr21:39401333-39401636 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 101 |
| Conread position: | 1-298 |
| Cow position: | chr21:14760318-14760615 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 1-298 |
| Cow position: | chr21:18494711-18495012 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 143, 34 |
| Conread position: | 1-299 |
| Cow position: | chr21:3236265-3236568 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 101 |
| Conread position: | 1-299 |
| Cow position: | chr21:42914013-42913701 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 298 |
| Conread position: | 1-303 |
| Cow position: | chr21:23821901-23822215 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 101, 118 |
| Conread position: | 1-336 |
| Cow position: | chr21:5392805-5392459 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 1-337 |
| Cow position: | chr21:5344394-5344744 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 100 |
| Conread position: | 1-388 |
| Cow position: | chr21:643070-643453 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 87 |
| Conread position: | 1-388 |
| Cow position: | chr21:33997492-33997098 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 195 |
| Conread position: | 1-390 |
| Cow position: | chr21:36163230-36162828 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 299 |
| Conread position: | 1-394 |
| Cow position: | chr21:2420238-2420634 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 1-394 |
| Cow position: | chr21:19196435-19196029 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 279 |
| Conread position: | 1-394 |
| Cow position: | chr21:19766587-19766989 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 228 |
| Conread position: | 1-394 |
| Cow position: | chr21:46912277-46912680 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 111 |
| Conread position: | 1-397 |
| Cow position: | chr21:28429183-28429582 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 1-398 |
| Cow position: | chr21:6833785-6834188 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 1-398 |
| Cow position: | chr21:25127343-25127743 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 54 |
| Conread position: | 1-399 |
| Cow position: | chr21:641317-641727 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 291 |
| Conread position: | 1-399 |
| Cow position: | chr21:5153350-5153761 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 1-399 |
| Cow position: | chr21:20045034-20044624 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 1-399 |
| Cow position: | chr21:23586596-23587022 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 1-399 |
| Cow position: | chr21:25344611-25345001 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 145, 270 |
| Conread position: | 1-399 |
| Cow position: | chr21:27230059-27229654 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 1-399 |
| Cow position: | chr21:36795333-36795743 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 224 |
| Conread position: | 1-399 |
| Cow position: | chr21:37299198-37299602 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 239 |
| Conread position: | 1-399 |
| Cow position: | chr21:42500764-42501190 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 2-252 |
| Cow position: | chr21:5566725-5566995 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 101, 75 |
| Conread position: | 2-254 |
| Cow position: | chr21:13763359-13763618 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 143, 91 |
| Conread position: | 2-282 |
| Cow position: | chr21:18934657-18934947 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 94, 109 |
| Conread position: | 2-293 |
| Cow position: | chr21:33209933-33210242 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 101, 54 |
| Conread position: | 2-350 |
| Cow position: | chr21:4189566-4189932 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 225 |
| Conread position: | 2-397 |
| Cow position: | chr21:15584665-15584281 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 2-399 |
| Cow position: | chr21:5898661-5898262 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 2-399 |
| Cow position: | chr21:9415977-9416391 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 2-399 |
| Cow position: | chr21:24297029-24296627 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 145, 75 |
| Conread position: | 2-399 |
| Cow position: | chr21:34391232-34390835 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 22 |
| Conread position: | 2-399 |
| Cow position: | chr21:45971421-45971034 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 3-187 |
| Cow position: | chr21:612032-611846 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 3-234 |
| Cow position: | chr21:34254545-34254302 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 3-274 |
| Cow position: | chr21:34658769-34659054 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 3-282 |
| Cow position: | chr21:26829500-26829230 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 185, 53 |
| Conread position: | 3-297 |
| Cow position: | chr21:26648269-26647968 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 141, 93 |
| Conread position: | 3-299 |
| Cow position: | chr21:13751122-13751435 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 3-332 |
| Cow position: | chr21:28881884-28882210 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 3-333 |
| Cow position: | chr21:45866671-45867008 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 95, 126 |
| Conread position: | 3-336 |
| Cow position: | chr21:17417028-17416682 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 298 |
| Conread position: | 3-337 |
| Cow position: | chr21:27743476-27743827 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 3-352 |
| Cow position: | chr21:16188060-16187714 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 3-391 |
| Cow position: | chr21:7564587-7564175 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 117 |
| Conread position: | 3-394 |
| Cow position: | chr21:13048461-13048058 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 3-397 |
| Cow position: | chr21:28734177-28733775 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 241 |
| Conread position: | 3-398 |
| Cow position: | chr21:33729168-33729569 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 244 |
| Conread position: | 3-399 |
| Cow position: | chr21:4282129-4281735 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 3-399 |
| Cow position: | chr21:25382733-25383166 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 145 |
| Conread position: | 4-397 |
| Cow position: | chr21:17722761-17723151 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 4-399 |
| Cow position: | chr21:43357525-43357116 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 100 |
| Conread position: | 5-336 |
| Cow position: | chr21:36756352-36756677 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 100, 29 |
| Conread position: | 5-336 |
| Cow position: | chr21:47802525-47802182 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 270 |
| Conread position: | 5-384 |
| Cow position: | chr21:10966970-10967357 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 98, 304 |
| Conread position: | 6-388 |
| Cow position: | chr21:4399538-4399932 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 6-399 |
| Cow position: | chr21:30607365-30606946 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 56, 321 |
| Conread position: | 7-261 |
| Cow position: | chr21:363394-363654 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 96, 136 |
| Conread position: | 9-399 |
| Cow position: | chr21:20160425-20160816 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 271 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 135, 217 |
| Conread position: | 14-295 |
| Cow position: | chr21:13128348-13128059 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 16-288 |
| Cow position: | chr21:42190419-42190141 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 17-325 |
| Cow position: | chr21:912215-911900 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 21-394 |
| Cow position: | chr21:10151548-10151940 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 126, 202 |
| Conread position: | 22-399 |
| Cow position: | chr21:38900527-38900913 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 75, 266 |
| Conread position: | 24-279 |
| Cow position: | chr21:5636965-5636693 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 24-292 |
| Cow position: | chr21:26244683-26244957 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 68 |
| Conread position: | 35-399 |
| Cow position: | chr21:33489-33859 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 37-296 |
| Cow position: | chr21:41878245-41878514 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 182 |
| Conread position: | 37-297 |
| Cow position: | chr21:15445310-15445029 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 56-261 |
| Cow position: | chr21:13303607-13303823 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 64-282 |
| Cow position: | chr21:24094948-24094721 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 64-289 |
| Cow position: | chr21:40133951-40134195 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 64-292 |
| Cow position: | chr21:33791573-33791327 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 64-303 |
| Cow position: | chr21:2927407-2927154 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 64-308 |
| Cow position: | chr21:8618070-8618330 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 250 |
| Conread position: | 64-335 |
| Cow position: | chr21:37361678-37361388 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 157 |
| Conread position: | 64-336 |
| Cow position: | chr21:29484780-29485059 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 64-398 |
| Cow position: | chr21:7709960-7710301 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 5, 160 |
| Conread position: | 64-399 |
| Cow position: | chr21:1058873-1059215 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 160 |
| Conread position: | 64-399 |
| Cow position: | chr21:6051302-6051643 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 159 |
| Conread position: | 65-350 |
| Cow position: | chr21:3381284-3380987 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 85, 235 |
| Conread position: | 65-399 |
| Cow position: | chr21:15610952-15611280 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 66-288 |
| Cow position: | chr21:27521527-27521298 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 67-394 |
| Cow position: | chr21:9310842-9311187 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 46, 205 |
| Conread position: | 68-341 |
| Cow position: | chr21:31676298-31676581 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 229 |
| Conread position: | 68-399 |
| Cow position: | chr21:3763936-3763603 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 71-399 |
| Cow position: | chr21:32339932-32339600 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 72-336 |
| Cow position: | chr21:38449648-38449368 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 31, 235 |
| Conread position: | 73-261 |
| Cow position: | chr21:34835618-34835430 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 73-294 |
| Cow position: | chr21:45330803-45330562 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 30, 236 |
| Conread position: | 73-387 |
| Cow position: | chr21:45355641-45355961 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 73-399 |
| Cow position: | chr21:42135819-42135476 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 74-308 |
| Cow position: | chr21:31277627-31277876 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 75-253 |
| Cow position: | chr21:10118360-10118555 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 75-256 |
| Cow position: | chr21:13163700-13163890 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 76-299 |
| Cow position: | chr21:17193952-17193709 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 239 |
| Conread position: | 77-258 |
| Cow position: | chr21:40065506-40065313 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 78-399 |
| Cow position: | chr21:13365151-13365482 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 131 |
| Conread position: | 79-296 |
| Cow position: | chr21:47764301-47764074 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 79-299 |
| Cow position: | chr21:3813672-3813441 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 189 |
| Conread position: | 79-399 |
| Cow position: | chr21:14452041-14452374 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 80-335 |
| Cow position: | chr21:40589671-40589408 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 143 |
| Conread position: | 81-258 |
| Cow position: | chr21:4268686-4268877 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 81-263 |
| Cow position: | chr21:28027616-28027813 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 84-399 |
| Cow position: | chr21:37345286-37344961 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 219 |
| Conread position: | 86-399 |
| Cow position: | chr21:15911218-15911540 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 87-336 |
| Cow position: | chr21:39450349-39450084 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 87-397 |
| Cow position: | chr21:9990333-9990648 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 88-399 |
| Cow position: | chr21:17183741-17184057 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 90-296 |
| Cow position: | chr21:8235722-8235512 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 98 |
| Conread position: | 95-398 |
| Cow position: | chr21:41198583-41198260 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 96-353 |
| Cow position: | chr21:9872796-9873054 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 96-399 |
| Cow position: | chr21:27146163-27145853 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 97-299 |
| Cow position: | chr21:712764-712971 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 99-399 |
| Cow position: | chr21:10000912-10001215 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 102-399 |
| Cow position: | chr21:28244311-28244610 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 103-399 |
| Cow position: | chr21:10114493-10114194 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 149 |
| Conread position: | 109-394 |
| Cow position: | chr21:13840164-13840461 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 191 |
| Conread position: | 113-395 |
| Cow position: | chr21:24642364-24642656 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 125-399 |
| Cow position: | chr21:42007602-42007322 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 19, 171 |
| Conread position: | 144-399 |
| Cow position: | chr21:20152827-20153096 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 163 |
| Conread position: | 144-399 |
| Cow position: | chr21:30835253-30835503 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 150-399 |
| Cow position: | chr21:36789679-36789935 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 178-397 |
| Cow position: | chr21:9698162-9697942 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 109 |
| Conread position: | 178-398 |
| Cow position: | chr21:46140965-46141187 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 109 |
| Conread position: | 182-399 |
| Cow position: | chr21:40266049-40266261 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 200-399 |
| Cow position: | chr21:17890246-17890442 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 87 |
Show alignments to all cow chromosomes.