Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-186
Cow position: chr24:29606422-29606233 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 27

Conread position: 1-253
Cow position: chr24:16267423-16267686 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 174

Conread position: 1-253
Cow position: chr24:18257425-18257165 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 95, 0

Conread position: 1-261
Cow position: chr24:25320637-25320912 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 55

Conread position: 1-261
Cow position: chr24:25664775-25665043 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 102, 147

Conread position: 1-261
Cow position: chr24:38374933-38375201 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 146, 55

Conread position: 1-275
Cow position: chr24:21264861-21264575 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 146, 92

Conread position: 1-275
Cow position: chr24:27270441-27270715 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 96, 33

Conread position: 1-279
Cow position: chr24:20970147-20969862 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 204

Conread position: 1-292
Cow position: chr24:27809824-27810137 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 1-292
Cow position: chr24:33098842-33098535 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 74

Conread position: 1-293
Cow position: chr24:34564769-34565074 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 1-293
Cow position: chr24:39440912-39440602 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 50

Conread position: 1-296
Cow position: chr24:3493539-3493839 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 24

Conread position: 1-297
Cow position: chr24:40129757-40130080 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 114

Conread position: 1-299
Cow position: chr24:6340662-6340968 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 268

Conread position: 1-299
Cow position: chr24:39492942-39493251 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 96, 49

Conread position: 1-303
Cow position: chr24:6450177-6450458 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 260, 55

Conread position: 1-311
Cow position: chr24:43733616-43733940 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 102, 14

Conread position: 1-325
Cow position: chr24:28062591-28062934 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 75, 43

Conread position: 1-335
Cow position: chr24:18266521-18266176 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 19

Conread position: 1-336
Cow position: chr24:814617-814272 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 55

Conread position: 1-336
Cow position: chr24:36555183-36554844 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 112

Conread position: 1-343
Cow position: chr24:24137215-24136865 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 37

Conread position: 1-350
Cow position: chr24:27052846-27052491 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 48

Conread position: 1-386
Cow position: chr24:27290525-27290910 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 55

Conread position: 1-388
Cow position: chr24:32054316-32054702 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 167

Conread position: 1-397
Cow position: chr24:44041361-44040955 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 42

Conread position: 1-398
Cow position: chr24:43364005-43364409 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 1-399
Cow position: chr24:24491365-24490966 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 272
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 55

Conread position: 1-399
Cow position: chr24:27906073-27906491 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 232

Conread position: 1-399
Cow position: chr24:29596163-29595757 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 290
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 144, 24

Conread position: 1-399
Cow position: chr24:32205151-32204743 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 87, 225

Conread position: 2-187
Cow position: chr24:39900675-39900487 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 93

Conread position: 2-261
Cow position: chr24:27267284-27267550 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 54

Conread position: 2-308
Cow position: chr24:14648681-14648381 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 49

Conread position: 2-331
Cow position: chr24:29027698-29028025 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 142, 54

Conread position: 2-336
Cow position: chr24:42103016-42103363 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 90

Conread position: 2-380
Cow position: chr24:18485354-18484961 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 223

Conread position: 2-383
Cow position: chr24:20024253-20024649 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 297

Conread position: 2-397
Cow position: chr24:2674978-2675365 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 25

Conread position: 2-399
Cow position: chr24:27844874-27844476 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 213

Conread position: 2-399
Cow position: chr24:29673165-29673574 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 297

Conread position: 3-295
Cow position: chr24:44054495-44054209 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 178

Conread position: 3-334
Cow position: chr24:27149054-27149386 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 147, 61

Conread position: 3-397
Cow position: chr24:17104917-17104520 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 101, 51

Conread position: 3-399
Cow position: chr24:33944040-33944453 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 241

Conread position: 7-285
Cow position: chr24:27720098-27719812 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 138, 45

Conread position: 7-399
Cow position: chr24:44987723-44987323 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 292

Conread position: 9-398
Cow position: chr24:38814627-38815018 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 89, 47

Conread position: 11-296
Cow position: chr24:5435387-5435090 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 46

Conread position: 12-399
Cow position: chr24:5754497-5754888 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 267
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 91, 275

Conread position: 16-282
Cow position: chr24:38347339-38347625 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 21-261
Cow position: chr24:27465900-27465661 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 22

Conread position: 21-394
Cow position: chr24:3663850-3664223 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 76, 112

Conread position: 21-399
Cow position: chr24:3430387-3430785 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 148

Conread position: 32-294
Cow position: chr24:18970812-18970556 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 71, 39

Conread position: 39-287
Cow position: chr24:18734677-18734410 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 96

Conread position: 46-332
Cow position: chr24:30177926-30178226 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 117

Conread position: 46-399
Cow position: chr24:15861907-15861542 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 17

Conread position: 47-253
Cow position: chr24:44808936-44809157 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 28

Conread position: 48-295
Cow position: chr24:43683765-43683514 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 12, 113

Conread position: 51-260
Cow position: chr24:28600918-28600699 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 91

Conread position: 51-296
Cow position: chr24:31159321-31159574 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 113

Conread position: 56-253
Cow position: chr24:8770284-8770493 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 56-398
Cow position: chr24:28600154-28599809 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 40, 90

Conread position: 63-286
Cow position: chr24:29388957-29389185 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 26

Conread position: 63-294
Cow position: chr24:43432509-43432745 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 142

Conread position: 64-307
Cow position: chr24:16556923-16556674 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 29

Conread position: 64-337
Cow position: chr24:17294479-17294200 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 154

Conread position: 65-250
Cow position: chr24:2730861-2730664 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 158

Conread position: 66-281
Cow position: chr24:591620-591853 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 66-297
Cow position: chr24:21860511-21860270 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 222

Conread position: 69-337
Cow position: chr24:14729122-14729393 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 142

Conread position: 70-279
Cow position: chr24:18324328-18324559 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 70-291
Cow position: chr24:35073806-35074042 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 153

Conread position: 71-399
Cow position: chr24:6102548-6102879 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 54

Conread position: 72-349
Cow position: chr24:20942893-20943168 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 73, 30

Conread position: 73-183
Cow position: chr24:6677219-6677332 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 73-398
Cow position: chr24:27096403-27096740 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 9

Conread position: 76-312
Cow position: chr24:6900544-6900793 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 216

Conread position: 79-282
Cow position: chr24:30545133-30544918 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 82-291
Cow position: chr24:18390562-18390339 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 221

Conread position: 88-320
Cow position: chr24:5151967-5152209 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 25

Conread position: 89-261
Cow position: chr24:25950934-25950750 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 155

Conread position: 96-380
Cow position: chr24:27608357-27608065 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 141

Conread position: 107-399
Cow position: chr24:2096137-2095830 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 120-336
Cow position: chr24:31382673-31382890 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 51

Conread position: 144-399
Cow position: chr24:16645530-16645268 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 151

Conread position: 178-398
Cow position: chr24:18343885-18344114 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 178-398
Cow position: chr24:26554765-26554546 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 108

Conread position: 182-397
Cow position: chr24:29586833-29587050 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 29

Show alignments to all cow chromosomes.