Cow genome map
| Conread name: | reje03b_g17.y1 |
| Conread position: | 1-181 |
| Cow position: | chr26:2994984-2994803 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 143, 49 |
| Conread position: | 1-186 |
| Cow position: | chr26:32653043-32652851 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 1-228 |
| Cow position: | chr26:3684548-3684777 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 1-255 |
| Cow position: | chr26:13270992-13270722 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-261 |
| Cow position: | chr26:7961318-7961589 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 222 |
| Conread position: | 1-261 |
| Cow position: | chr26:19447749-19447467 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 1-282 |
| Cow position: | chr26:14395549-14395261 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 100, 240 |
| Conread position: | 1-296 |
| Cow position: | chr26:9604228-9604558 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-297 |
| Cow position: | chr26:34108456-34108755 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 1-300 |
| Cow position: | chr26:32553367-32553680 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 100, 193 |
| Conread position: | 1-308 |
| Cow position: | chr26:12807829-12807508 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 1-336 |
| Cow position: | chr26:6447916-6447567 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 1-337 |
| Cow position: | chr26:33044770-33045112 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 1-388 |
| Cow position: | chr26:20291996-20291610 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 1-394 |
| Cow position: | chr26:6714597-6714214 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 1-399 |
| Cow position: | chr26:2531488-2531094 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 76 |
| Conread position: | 2-252 |
| Cow position: | chr26:7525791-7525520 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-334 |
| Cow position: | chr26:3182251-3181911 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 3-274 |
| Cow position: | chr26:28442322-28442036 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 104 |
| Conread position: | 3-280 |
| Cow position: | chr26:27594344-27594612 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 173, 40 |
| Conread position: | 3-297 |
| Cow position: | chr26:9867440-9867121 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 183 |
| Conread position: | 3-336 |
| Cow position: | chr26:25393721-25394063 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 3-337 |
| Cow position: | chr26:15561281-15560943 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 143, 90 |
| Conread position: | 3-384 |
| Cow position: | chr26:32776818-32776432 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 135 |
| Conread position: | 3-388 |
| Cow position: | chr26:21418764-21418370 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 3-398 |
| Cow position: | chr26:14173985-14174392 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 3-398 |
| Cow position: | chr26:21912475-21912892 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 36, 118 |
| Conread position: | 3-399 |
| Cow position: | chr26:32955932-32955537 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 6-399 |
| Cow position: | chr26:14951461-14951050 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 248 |
| Conread position: | 8-183 |
| Cow position: | chr26:16585083-16585260 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 89, 166 |
| Conread position: | 15-255 |
| Cow position: | chr26:29576090-29576339 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 17-341 |
| Cow position: | chr26:755404-755069 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 281 |
| Conread position: | 24-388 |
| Cow position: | chr26:6188005-6188380 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 279 |
| Conread position: | 35-398 |
| Cow position: | chr26:16549703-16550080 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 37-297 |
| Cow position: | chr26:16796508-16796234 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 37-399 |
| Cow position: | chr26:7642855-7642480 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 84, 251 |
| Conread position: | 38-335 |
| Cow position: | chr26:32013353-32013662 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 182 |
| Conread position: | 46-399 |
| Cow position: | chr26:33567310-33566951 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 98, 56 |
| Conread position: | 56-296 |
| Cow position: | chr26:12155370-12155122 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 108 |
| Conread position: | 63-319 |
| Cow position: | chr26:32898123-32897856 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 40, 235 |
| Conread position: | 63-394 |
| Cow position: | chr26:29332848-29333181 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 64-282 |
| Cow position: | chr26:9104532-9104299 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 64-294 |
| Cow position: | chr26:20846372-20846618 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 33, 243 |
| Conread position: | 64-299 |
| Cow position: | chr26:23097429-23097185 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 64-394 |
| Cow position: | chr26:21991864-21992190 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 65-297 |
| Cow position: | chr26:10768151-10767915 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 65-399 |
| Cow position: | chr26:8810882-8811220 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 33, 155 |
| Conread position: | 73-261 |
| Cow position: | chr26:25442132-25441928 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 75-286 |
| Cow position: | chr26:613913-613692 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 29, 142 |
| Conread position: | 76-339 |
| Cow position: | chr26:9850332-9850064 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 76-339 |
| Cow position: | chr26:9853842-9853574 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 77-261 |
| Cow position: | chr26:30034643-30034449 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 77-299 |
| Cow position: | chr26:21351450-21351686 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 228 |
| Conread position: | 78-391 |
| Cow position: | chr26:33096803-33096473 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 227 |
| Conread position: | 80-388 |
| Cow position: | chr26:17057448-17057761 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 64, 206 |
| Conread position: | 81-296 |
| Cow position: | chr26:18692201-18692417 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 81-399 |
| Cow position: | chr26:6793906-6794238 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 207 |
| Conread position: | 85-399 |
| Cow position: | chr26:21242874-21243188 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 136 |
| Conread position: | 87-399 |
| Cow position: | chr26:19774531-19774206 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 57, 213 |
| Conread position: | 92-399 |
| Cow position: | chr26:15200739-15200423 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 96-399 |
| Cow position: | chr26:8642740-8643034 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 99-301 |
| Cow position: | chr26:8186435-8186651 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 102-294 |
| Cow position: | chr26:20448760-20448956 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 106-399 |
| Cow position: | chr26:25526038-25526342 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 116-352 |
| Cow position: | chr26:10747810-10747584 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 180-399 |
| Cow position: | chr26:31903043-31903260 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 31 |
| Conread position: | 186-399 |
| Cow position: | chr26:34314574-34314784 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 23 |
Show alignments to all cow chromosomes.