Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-182
Cow position: chr28:16925536-16925351 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-234
Cow position: chr28:3479940-3480191 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 1-255
Cow position: chr28:16441065-16441323 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 102, 55

Conread position: 1-292
Cow position: chr28:19222919-19222618 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 74

Conread position: 1-292
Cow position: chr28:21363433-21363726 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 123

Conread position: 1-298
Cow position: chr28:23839887-23840185 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 143, 57

Conread position: 1-308
Cow position: chr28:14933637-14933965 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 225

Conread position: 1-320
Cow position: chr28:22171054-22170707 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 63

Conread position: 1-334
Cow position: chr28:33163782-33163444 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 143, 33

Conread position: 1-336
Cow position: chr28:8787225-8787558 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 101

Conread position: 1-336
Cow position: chr28:18790687-18791034 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 100, 50

Conread position: 1-337
Cow position: chr28:4022057-4022407 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 1-337
Cow position: chr28:23480586-23480239 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 63

Conread position: 1-352
Cow position: chr28:3256476-3256832 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 143, 93

Conread position: 1-355
Cow position: chr28:5904411-5904769 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 149, 160

Conread position: 1-385
Cow position: chr28:22322940-22323335 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 272

Conread position: 1-388
Cow position: chr28:5684379-5684773 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 96, 270

Conread position: 1-397
Cow position: chr28:5817527-5817921 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 1-398
Cow position: chr28:12946620-12947029 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 29

Conread position: 1-398
Cow position: chr28:19222470-19222071 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 171

Conread position: 1-398
Cow position: chr28:25806272-25806653 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 274
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 149, 55

Conread position: 1-399
Cow position: chr28:3144212-3143797 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 55

Conread position: 1-399
Cow position: chr28:3914385-3914798 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 299

Conread position: 1-399
Cow position: chr28:5203880-5204276 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 149, 36

Conread position: 1-399
Cow position: chr28:8022436-8022022 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 102, 223

Conread position: 1-399
Cow position: chr28:11787031-11786636 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 74

Conread position: 1-399
Cow position: chr28:21598578-21598171 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 301

Conread position: 1-399
Cow position: chr28:21868126-21868538 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 302

Conread position: 2-266
Cow position: chr28:22304533-22304799 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 95, 54

Conread position: 2-394
Cow position: chr28:17638188-17637789 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 100, 52

Conread position: 2-398
Cow position: chr28:10682146-10681745 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 2-398
Cow position: chr28:10744881-10745294 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 302

Conread position: 2-399
Cow position: chr28:21354900-21355312 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 372

Conread position: 3-299
Cow position: chr28:10606935-10606642 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 141, 76

Conread position: 3-299
Cow position: chr28:17030032-17029734 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 144, 42

Conread position: 3-303
Cow position: chr28:31648754-31649068 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 141, 43

Conread position: 3-315
Cow position: chr28:22500809-22500493 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 104

Conread position: 3-398
Cow position: chr28:7512913-7512504 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 54

Conread position: 3-398
Cow position: chr28:26922693-26922288 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 25

Conread position: 3-399
Cow position: chr28:7865008-7865410 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 142, 53

Conread position: 3-399
Cow position: chr28:8347399-8347812 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 284
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 308

Conread position: 3-399
Cow position: chr28:13267458-13267870 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 43

Conread position: 3-399
Cow position: chr28:20312951-20313358 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 3-399
Cow position: chr28:30327407-30327010 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 273
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 12

Conread position: 4-300
Cow position: chr28:11827164-11827476 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 106

Conread position: 6-399
Cow position: chr28:4308218-4307816 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 105

Conread position: 7-297
Cow position: chr28:2124120-2124411 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 135, 104

Conread position: 7-399
Cow position: chr28:26684796-26685198 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 57, 53

Conread position: 15-252
Cow position: chr28:22279492-22279260 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 39

Conread position: 34-295
Cow position: chr28:9390657-9390381 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 209

Conread position: 37-399
Cow position: chr28:31110294-31109923 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 187

Conread position: 43-291
Cow position: chr28:26784751-26784485 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 23, 173

Conread position: 64-286
Cow position: chr28:24996851-24996615 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 9, 61

Conread position: 64-296
Cow position: chr28:23410587-23410341 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 159

Conread position: 64-336
Cow position: chr28:16253117-16252838 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 38

Conread position: 64-398
Cow position: chr28:26533280-26533623 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 182

Conread position: 64-399
Cow position: chr28:2862599-2862949 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 39, 224

Conread position: 64-399
Cow position: chr28:8408473-8408815 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 77

Conread position: 65-337
Cow position: chr28:5773381-5773655 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 37

Conread position: 65-367
Cow position: chr28:25424564-25424244 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 250

Conread position: 65-399
Cow position: chr28:19026264-19025924 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 141

Conread position: 67-181
Cow position: chr28:1099901-1099783 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 68-306
Cow position: chr28:6861695-6861947 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 63

Conread position: 68-388
Cow position: chr28:21502137-21502462 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 76, 155

Conread position: 69-323
Cow position: chr28:27428495-27428752 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 105

Conread position: 69-382
Cow position: chr28:22484991-22485317 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 48

Conread position: 70-246
Cow position: chr28:32813255-32813063 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 64

Conread position: 73-279
Cow position: chr28:26719107-26719317 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 47

Conread position: 73-337
Cow position: chr28:4057733-4058001 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 220

Conread position: 74-320
Cow position: chr28:13607633-13607891 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 226

Conread position: 76-296
Cow position: chr28:22321172-22321411 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 77-252
Cow position: chr28:34636429-34636605 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 151

Conread position: 77-275
Cow position: chr28:2898746-2898961 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 78-255
Cow position: chr28:4914350-4914155 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 78-294
Cow position: chr28:10529731-10529507 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 144

Conread position: 80-300
Cow position: chr28:17356110-17355875 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 194

Conread position: 89-351
Cow position: chr28:9285615-9285337 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 205

Conread position: 90-394
Cow position: chr28:34430663-34430347 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 185

Conread position: 92-261
Cow position: chr28:3077759-3077935 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 125

Conread position: 92-399
Cow position: chr28:11884757-11884440 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 64

Conread position: 95-336
Cow position: chr28:22739570-22739810 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 85, 103

Conread position: 96-232
Cow position: chr28:34844479-34844339 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 98-399
Cow position: chr28:10053566-10053244 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 215

Conread position: 99-295
Cow position: chr28:13447482-13447680 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 51, 84

Conread position: 105-282
Cow position: chr28:5188622-5188434 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 144-336
Cow position: chr28:28903845-28903645 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 8

Conread position: 186-399
Cow position: chr28:26982869-26982657 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 108

Conread position: 195-399
Cow position: chr28:3011394-3011189 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 118

Show alignments to all cow chromosomes.