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Cow genome map

           
Conread name:
           
reje03b_g17.y1
        

               
Conread position:
               
1-186
               

               
Cow position:
               
chr3:58383608-58383803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr3:55110197-55109990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr3:53223002-53222733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr3:45523911-45524181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr3:364562-364295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr3:18393737-18393471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr3:48530284-48530568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr3:2483102-2483385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr3:22872406-22872108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr3:14552525-14552817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr3:15662052-15661758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr3:31419342-31419643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 228
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr3:57763853-57764171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
60, 312
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr3:59691550-59691846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 168
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr3:77271631-77271322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr3:42177802-42178109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr3:6853857-6853551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 301
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr3:19708451-19708149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr3:26903763-26904065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr3:45312698-45313004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 220
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr3:49218661-49218359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 214
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr3:48296357-48296666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr3:79208345-79208040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr3:17952302-17952613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 303
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr3:61678337-61678660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr3:46350293-46350659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 320
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr3:42423689-42423340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 343
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr3:33698371-33698720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr3:39328058-39328389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 101
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:28675635-28675977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 273
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:41367337-41366990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:60892277-60892613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr3:59603613-59604010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 270
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr3:68586687-68587068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr3:11986977-11987376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr3:14263041-14263440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr3:53593053-53592642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr3:79220495-79220905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 327
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr3:15954430-15954034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr3:31206519-31206927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr3:34270580-34270964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
218, 55
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr3:56582493-56582899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr3:70566092-70565687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
102, 214
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr3:79592242-79591840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr3:80053888-80053491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 160
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:2674675-2675081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 298
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:7566768-7566365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:14626504-14626098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 101
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:18066780-18067184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 298
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:30179730-30180138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:48241267-48241666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 298
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:49650027-49650440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:53046995-53046611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:55085544-55085117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 319
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:57577346-57577749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:59001099-59000705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 220
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:71231052-71231447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 173
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr3:20129594-20129862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr3:66610191-66609888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 215
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr3:49461290-49460874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 312
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr3:9663539-9663351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr3:54808807-54808996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr3:38346851-38347107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr3:8148014-8147751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr3:61361065-61361323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr3:31047294-31046999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 114
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr3:26894319-26894617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr3:522373-522659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
259, 154
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr3:80581324-80581617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr3:2903650-2903339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 171
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr3:20802980-20802666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr3:69849854-69849518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 217
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr3:43528589-43528246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 227
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr3:60933080-60933464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr3:10958577-10958190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr3:61539445-61539852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr3:72675736-72676142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr3:5365333-5365729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 159
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr3:72390731-72391134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr3:62826964-62826568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr3:11254502-11254219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr3:9843228-9843540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr3:2007924-2008256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
142, 84
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr3:48252546-48252937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr3:83816150-83815749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 312
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr3:72018775-72019091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
96, 81
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr3:79292491-79292784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
12-225
               

               
Cow position:
               
chr3:27553208-27553438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
14-398
               

               
Cow position:
               
chr3:61857155-61857557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 261
               

               
Conread position:
               
15-177
               

               
Cow position:
               
chr3:42191175-42191016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
15-291
               

               
Cow position:
               
chr3:61171842-61171555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr3:59514775-59515056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
17-399
               

               
Cow position:
               
chr3:15052281-15051898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
23-334
               

               
Cow position:
               
chr3:59596873-59597179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
24-337
               

               
Cow position:
               
chr3:59271228-59271533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
26-315
               

               
Cow position:
               
chr3:82657414-82657112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
26-399
               

               
Cow position:
               
chr3:31309691-31309302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
33, 256
               

               
Conread position:
               
26-399
               

               
Cow position:
               
chr3:55970178-55970559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
28-286
               

               
Cow position:
               
chr3:7678349-7678613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
37-398
               

               
Cow position:
               
chr3:57754798-57754425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
37-399
               

               
Cow position:
               
chr3:2024866-2025250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 352
               

               
Conread position:
               
37-399
               

               
Cow position:
               
chr3:67704218-67704598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
31, 269
               

               
Conread position:
               
38-399
               

               
Cow position:
               
chr3:53112851-53113227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 265
               

               
Conread position:
               
39-252
               

               
Cow position:
               
chr3:18700514-18700308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
46-336
               

               
Cow position:
               
chr3:65800286-65800581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
48-388
               

               
Cow position:
               
chr3:82460876-82461220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
49-398
               

               
Cow position:
               
chr3:39661756-39661406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
49-399
               

               
Cow position:
               
chr3:52863489-52863132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
51-290
               

               
Cow position:
               
chr3:18763590-18763843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 231
               

               
Conread position:
               
51-399
               

               
Cow position:
               
chr3:37041125-37041471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
55-261
               

               
Cow position:
               
chr3:18854794-18855012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
58-399
               

               
Cow position:
               
chr3:53739488-53739133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 245
               

               
Conread position:
               
59-292
               

               
Cow position:
               
chr3:25691452-25691705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr3:70333769-70333492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
61-272
               

               
Cow position:
               
chr3:19198387-19198601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 199
               

               
Conread position:
               
64-261
               

               
Cow position:
               
chr3:33253169-33252960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
64-270
               

               
Cow position:
               
chr3:51609525-51609745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 206
               

               
Conread position:
               
64-294
               

               
Cow position:
               
chr3:71430502-71430254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
64-296
               

               
Cow position:
               
chr3:3985039-3985282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 232
               

               
Conread position:
               
64-397
               

               
Cow position:
               
chr3:56059516-56059861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
64-399
               

               
Cow position:
               
chr3:65413566-65413226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
65-261
               

               
Cow position:
               
chr3:56704827-56704627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
65-298
               

               
Cow position:
               
chr3:4031678-4031928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-296
               

               
Cow position:
               
chr3:29812956-29813200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
67-398
               

               
Cow position:
               
chr3:29596107-29596441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
68-399
               

               
Cow position:
               
chr3:66292465-66292124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 155
               

               
Conread position:
               
69-296
               

               
Cow position:
               
chr3:38691692-38691453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 234
               

               
Conread position:
               
69-383
               

               
Cow position:
               
chr3:76138202-76138507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 145
               

               
Conread position:
               
71-280
               

               
Cow position:
               
chr3:59208530-59208753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
71-398
               

               
Cow position:
               
chr3:18497741-18498067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
71-398
               

               
Cow position:
               
chr3:68583286-68582948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 225
               

               
Conread position:
               
72-298
               

               
Cow position:
               
chr3:39171767-39171526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
73-277
               

               
Cow position:
               
chr3:54740153-54739953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
73-296
               

               
Cow position:
               
chr3:78894596-78894370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
73-299
               

               
Cow position:
               
chr3:13330054-13329819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 147
               

               
Conread position:
               
73-335
               

               
Cow position:
               
chr3:30701040-30701298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
73-377
               

               
Cow position:
               
chr3:63179586-63179887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
73-388
               

               
Cow position:
               
chr3:5096921-5097248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 230
               

               
Conread position:
               
73-391
               

               
Cow position:
               
chr3:17957185-17957511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
73-399
               

               
Cow position:
               
chr3:56651-56325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
74-399
               

               
Cow position:
               
chr3:77365575-77365238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
75-260
               

               
Cow position:
               
chr3:34392376-34392181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
75-275
               

               
Cow position:
               
chr3:49482984-49482773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
75-299
               

               
Cow position:
               
chr3:75158085-75158316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
76-286
               

               
Cow position:
               
chr3:42588070-42588302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
76-288
               

               
Cow position:
               
chr3:49731916-49731694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
76-336
               

               
Cow position:
               
chr3:42483621-42483897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
78-399
               

               
Cow position:
               
chr3:73394843-73395168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr3:57760244-57760550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
81-260
               

               
Cow position:
               
chr3:30055720-30055530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
81-351
               

               
Cow position:
               
chr3:54945851-54946135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 218
               

               
Conread position:
               
81-397
               

               
Cow position:
               
chr3:70334977-70334645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
84-336
               

               
Cow position:
               
chr3:84000341-84000602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 211
               

               
Conread position:
               
85-292
               

               
Cow position:
               
chr3:51578591-51578369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
91-340
               

               
Cow position:
               
chr3:73590262-73590001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
93-285
               

               
Cow position:
               
chr3:28692691-28692489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
93-399
               

               
Cow position:
               
chr3:59621893-59621596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
94-398
               

               
Cow position:
               
chr3:43233239-43233557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 204
               

               
Conread position:
               
95-387
               

               
Cow position:
               
chr3:8060873-8061166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
96-300
               

               
Cow position:
               
chr3:4087424-4087205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
96-394
               

               
Cow position:
               
chr3:23448389-23448090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
96-398
               

               
Cow position:
               
chr3:71237899-71238204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr3:56476425-56476672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
98-261
               

               
Cow position:
               
chr3:23269846-23270015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 109
               

               
Conread position:
               
99-333
               

               
Cow position:
               
chr3:48578586-48578827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
103-399
               

               
Cow position:
               
chr3:11711702-11712017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
104-299
               

               
Cow position:
               
chr3:15752878-15752677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
105-399
               

               
Cow position:
               
chr3:74878838-74878537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
116-280
               

               
Cow position:
               
chr3:4861451-4861622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
144-334
               

               
Cow position:
               
chr3:3062355-3062555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr3:76713529-76713273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
170-387
               

               
Cow position:
               
chr3:59884244-59884029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
178-398
               

               
Cow position:
               
chr3:3913614-3913391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
178-398
               

               
Cow position:
               
chr3:25944918-25945144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
180-388
               

               
Cow position:
               
chr3:55819586-55819799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
180-394
               

               
Cow position:
               
chr3:75687600-75687390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 29
               
Show alignments to all cow chromosomes.