Cow genome map
| Conread name: | reje03b_g17.y1 |
| Conread position: | 1-186 |
| Cow position: | chr6:6117847-6117651 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-242 |
| Cow position: | chr6:10649309-10649063 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 112 |
| Conread position: | 1-252 |
| Cow position: | chr6:55608097-55607841 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-258 |
| Cow position: | chr6:32210920-32210651 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 162 |
| Conread position: | 1-260 |
| Cow position: | chr6:19508722-19508461 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 192 |
| Conread position: | 1-261 |
| Cow position: | chr6:1784056-1783797 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 1-261 |
| Cow position: | chr6:50120076-50119806 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 1-273 |
| Cow position: | chr6:25407697-25407395 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 67, 239 |
| Conread position: | 1-280 |
| Cow position: | chr6:50446050-50445758 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 110 |
| Conread position: | 1-282 |
| Cow position: | chr6:2607323-2607619 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 96, 56 |
| Conread position: | 1-282 |
| Cow position: | chr6:10332397-10332086 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-282 |
| Cow position: | chr6:32916211-32915918 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 217 |
| Conread position: | 1-291 |
| Cow position: | chr6:58075937-58076242 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 149, 55 |
| Conread position: | 1-294 |
| Cow position: | chr6:51674619-51674928 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-295 |
| Cow position: | chr6:66304131-66303823 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 1-296 |
| Cow position: | chr6:44098797-44099106 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 1-298 |
| Cow position: | chr6:4864829-4864529 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 97 |
| Conread position: | 1-299 |
| Cow position: | chr6:48567633-48567328 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 244 |
| Conread position: | 1-306 |
| Cow position: | chr6:32867497-32867183 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 98, 201 |
| Conread position: | 1-308 |
| Cow position: | chr6:24902428-24902114 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 1-315 |
| Cow position: | chr6:54369187-54368865 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 146, 55 |
| Conread position: | 1-337 |
| Cow position: | chr6:46205727-46206067 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 134, 271 |
| Conread position: | 1-351 |
| Cow position: | chr6:12629723-12630088 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 33, 276 |
| Conread position: | 1-351 |
| Cow position: | chr6:18961811-18961447 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 168, 23 |
| Conread position: | 1-352 |
| Cow position: | chr6:8636984-8637348 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 100, 289 |
| Conread position: | 1-386 |
| Cow position: | chr6:55040508-55040111 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 99, 275 |
| Conread position: | 1-388 |
| Cow position: | chr6:12337694-12338098 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 301 |
| Conread position: | 1-388 |
| Cow position: | chr6:66532093-66531717 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 65, 103 |
| Conread position: | 1-391 |
| Cow position: | chr6:35842370-35842766 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 92 |
| Conread position: | 1-397 |
| Cow position: | chr6:32121620-32122021 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 224 |
| Conread position: | 1-397 |
| Cow position: | chr6:36470856-36470448 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 1-398 |
| Cow position: | chr6:8562425-8562835 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 99, 310 |
| Conread position: | 1-398 |
| Cow position: | chr6:21590427-21590822 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 101, 63 |
| Conread position: | 1-399 |
| Cow position: | chr6:6343137-6343546 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 33 |
| Conread position: | 1-399 |
| Cow position: | chr6:18987926-18988324 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 277 |
| Conread position: | 1-399 |
| Cow position: | chr6:19681807-19681409 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 164, 70 |
| Conread position: | 1-399 |
| Cow position: | chr6:36195923-36196326 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 253 |
| Conread position: | 1-399 |
| Cow position: | chr6:40031903-40032306 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 104 |
| Conread position: | 1-399 |
| Cow position: | chr6:42565395-42565804 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 121 |
| Conread position: | 1-399 |
| Cow position: | chr6:44078225-44078630 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 288 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 76, 225 |
| Conread position: | 1-399 |
| Cow position: | chr6:46557767-46558173 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 97, 88 |
| Conread position: | 1-399 |
| Cow position: | chr6:47305037-47305456 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 86 |
| Conread position: | 1-399 |
| Cow position: | chr6:61269044-61269428 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 2-296 |
| Cow position: | chr6:9008897-9008593 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 69 |
| Conread position: | 2-296 |
| Cow position: | chr6:63047287-63047597 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 2-399 |
| Cow position: | chr6:11169418-11169817 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 102 |
| Conread position: | 2-399 |
| Cow position: | chr6:35103614-35103212 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 3-262 |
| Cow position: | chr6:28476889-28477159 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 195 |
| Conread position: | 3-280 |
| Cow position: | chr6:6067977-6067693 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 3-281 |
| Cow position: | chr6:12927834-12928122 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 3-291 |
| Cow position: | chr6:10176587-10176283 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 3-292 |
| Cow position: | chr6:35990517-35990221 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 3-295 |
| Cow position: | chr6:20231114-20230811 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 117 |
| Conread position: | 3-296 |
| Cow position: | chr6:34196437-34196132 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 100, 217 |
| Conread position: | 3-298 |
| Cow position: | chr6:16410907-16411209 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 214 |
| Conread position: | 3-352 |
| Cow position: | chr6:36928364-36928730 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 138, 58 |
| Conread position: | 3-398 |
| Cow position: | chr6:66363533-66363120 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 3-399 |
| Cow position: | chr6:15938153-15937739 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 3-399 |
| Cow position: | chr6:51835112-51835515 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 4-399 |
| Cow position: | chr6:5095842-5095426 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 307 |
| Conread position: | 5-337 |
| Cow position: | chr6:9733117-9732785 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 6-252 |
| Cow position: | chr6:69500044-69500295 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 6-298 |
| Cow position: | chr6:14839312-14839007 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 104 |
| Conread position: | 6-398 |
| Cow position: | chr6:38218378-38218781 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 205 |
| Conread position: | 6-399 |
| Cow position: | chr6:54867226-54867633 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 95, 50 |
| Conread position: | 6-399 |
| Cow position: | chr6:57164141-57164545 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 7-399 |
| Cow position: | chr6:23695713-23696116 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 211 |
| Conread position: | 8-292 |
| Cow position: | chr6:5302683-5302401 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 10-298 |
| Cow position: | chr6:61515481-61515172 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 302 |
| Conread position: | 12-282 |
| Cow position: | chr6:53178360-53178640 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 134, 90 |
| Conread position: | 14-176 |
| Cow position: | chr6:3591848-3592011 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 17-398 |
| Cow position: | chr6:27240253-27239891 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 21-388 |
| Cow position: | chr6:48281724-48282097 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 82, 240 |
| Conread position: | 21-399 |
| Cow position: | chr6:54365594-54365212 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 92 |
| Conread position: | 23-261 |
| Cow position: | chr6:35471795-35471539 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 25-294 |
| Cow position: | chr6:52248404-52248115 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 35-399 |
| Cow position: | chr6:3952268-3952634 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 112, 67 |
| Conread position: | 37-180 |
| Cow position: | chr6:35769737-35769590 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 37-286 |
| Cow position: | chr6:54293856-54294116 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 63, 183 |
| Conread position: | 37-293 |
| Cow position: | chr6:57411391-57411648 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 107, 99 |
| Conread position: | 37-296 |
| Cow position: | chr6:64449137-64449409 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 90 |
| Conread position: | 46-297 |
| Cow position: | chr6:56849772-56850033 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 57, 105 |
| Conread position: | 49-299 |
| Cow position: | chr6:8804770-8804511 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 50-398 |
| Cow position: | chr6:20098206-20097844 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 172 |
| Conread position: | 51-187 |
| Cow position: | chr6:17549091-17549224 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 51-398 |
| Cow position: | chr6:61113509-61113882 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 298 |
| Conread position: | 54-261 |
| Cow position: | chr6:21110730-21110945 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 167 |
| Conread position: | 54-388 |
| Cow position: | chr6:3929084-3929423 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 59-336 |
| Cow position: | chr6:38614590-38614872 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 5, 126 |
| Conread position: | 61-334 |
| Cow position: | chr6:29239712-29239992 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 158 |
| Conread position: | 63-286 |
| Cow position: | chr6:45160520-45160286 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 157 |
| Conread position: | 63-294 |
| Cow position: | chr6:49002953-49002715 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 63-336 |
| Cow position: | chr6:130393-130108 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 81, 260 |
| Conread position: | 64-261 |
| Cow position: | chr6:388943-389150 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 64-295 |
| Cow position: | chr6:68049208-68049449 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 80, 160 |
| Conread position: | 64-398 |
| Cow position: | chr6:16746112-16746458 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 64-399 |
| Cow position: | chr6:8788264-8787921 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 64-399 |
| Cow position: | chr6:24468620-24468280 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 166 |
| Conread position: | 65-244 |
| Cow position: | chr6:51398574-51398764 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 180 |
| Conread position: | 66-262 |
| Cow position: | chr6:20605708-20605917 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 66-294 |
| Cow position: | chr6:60239614-60239378 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 67-399 |
| Cow position: | chr6:46865824-46865476 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 213 |
| Conread position: | 67-399 |
| Cow position: | chr6:66874137-66874467 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 36, 126 |
| Conread position: | 68-277 |
| Cow position: | chr6:66453578-66453798 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 69-298 |
| Cow position: | chr6:14850934-14850694 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 69-332 |
| Cow position: | chr6:49685362-49685634 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 233 |
| Conread position: | 69-399 |
| Cow position: | chr6:37148974-37149305 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 70-388 |
| Cow position: | chr6:38207717-38207385 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 74, 157 |
| Conread position: | 70-397 |
| Cow position: | chr6:4383271-4383593 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 74, 145 |
| Conread position: | 71-291 |
| Cow position: | chr6:30786369-30786142 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 71-399 |
| Cow position: | chr6:7190340-7190003 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 73-294 |
| Cow position: | chr6:15301036-15300811 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 148 |
| Conread position: | 73-383 |
| Cow position: | chr6:66433729-66434049 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 171 |
| Conread position: | 73-388 |
| Cow position: | chr6:36202609-36202923 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 73-391 |
| Cow position: | chr6:24110085-24110389 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 73-399 |
| Cow position: | chr6:35613628-35613301 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 75-399 |
| Cow position: | chr6:38440965-38441288 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 22, 221 |
| Conread position: | 77-399 |
| Cow position: | chr6:17997530-17997204 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 220 |
| Conread position: | 78-261 |
| Cow position: | chr6:59620455-59620649 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 166 |
| Conread position: | 80-248 |
| Cow position: | chr6:2896539-2896723 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 80-295 |
| Cow position: | chr6:57405336-57405108 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 80-296 |
| Cow position: | chr6:24515405-24515179 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 143 |
| Conread position: | 81-296 |
| Cow position: | chr6:46400616-46400394 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 82-323 |
| Cow position: | chr6:58732524-58732263 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 216 |
| Conread position: | 84-350 |
| Cow position: | chr6:54864874-54864589 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 84-399 |
| Cow position: | chr6:7989621-7989299 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 84-399 |
| Cow position: | chr6:21231329-21231640 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 5 |
| Conread position: | 85-296 |
| Cow position: | chr6:61137158-61137394 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 86-399 |
| Cow position: | chr6:38641292-38641608 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 87-388 |
| Cow position: | chr6:20157120-20157438 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 53, 222 |
| Conread position: | 89-296 |
| Cow position: | chr6:66131105-66131326 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 72 |
| Conread position: | 89-333 |
| Cow position: | chr6:48425524-48425274 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 10, 202 |
| Conread position: | 95-280 |
| Cow position: | chr6:48187777-48187577 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 95-301 |
| Cow position: | chr6:33276843-33277064 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 95-394 |
| Cow position: | chr6:55546356-55546064 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 95-399 |
| Cow position: | chr6:12092180-12091877 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 96-300 |
| Cow position: | chr6:16191472-16191696 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 96-352 |
| Cow position: | chr6:16423504-16423771 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 167 |
| Conread position: | 96-398 |
| Cow position: | chr6:52412659-52412974 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 208 |
| Conread position: | 98-296 |
| Cow position: | chr6:53519816-53519605 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 123 |
| Conread position: | 103-399 |
| Cow position: | chr6:47799110-47799409 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 116-399 |
| Cow position: | chr6:8125157-8125442 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 126 |
| Conread position: | 119-399 |
| Cow position: | chr6:65264707-65264430 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 125-399 |
| Cow position: | chr6:16764808-16764530 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 128-398 |
| Cow position: | chr6:14914402-14914121 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 172 |
| Conread position: | 132-394 |
| Cow position: | chr6:3595634-3595902 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 151 |
| Conread position: | 178-399 |
| Cow position: | chr6:4692080-4691859 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 180-398 |
| Cow position: | chr6:16266621-16266839 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 109 |
| Conread position: | 183-399 |
| Cow position: | chr6:15447298-15447082 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 192-397 |
| Cow position: | chr6:37395496-37395287 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 203-398 |
| Cow position: | chr6:13565006-13565201 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 103 |
Show alignments to all cow chromosomes.