Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-175
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 59

Conread position: 1-187
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 1-189
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 53

Conread position: 1-225
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 47

Conread position: 1-250
Cow position:
Alignm length: 265
Alignm identity: 200
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 96, 0

Conread position: 1-253
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 143, 95

Conread position: 1-255
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 17

Conread position: 1-260
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 55

Conread position: 1-261
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 158, 101

Conread position: 1-261
Cow position:
Alignm length: 269
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 183, 88

Conread position: 1-278
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 97, 26

Conread position: 1-282
Cow position:
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 184

Conread position: 1-292
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 217

Conread position: 1-293
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 187, 92

Conread position: 1-293
Cow position:
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 23

Conread position: 1-296
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 92

Conread position: 1-296
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 68

Conread position: 1-296
Cow position:
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 55

Conread position: 1-296
Cow position:
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 1-299
Cow position:
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 27

Conread position: 1-299
Cow position:
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 150

Conread position: 1-325
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 55

Conread position: 1-336
Cow position:
Alignm length: 356
Alignm identity: 251
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 49

Conread position: 1-337
Cow position:
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 55

Conread position: 1-388
Cow position:
Alignm length: 410
Alignm identity: 278
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 134

Conread position: 1-391
Cow position:
Alignm length: 414
Alignm identity: 285
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 100, 304

Conread position: 1-394
Cow position:
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 50

Conread position: 1-394
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 278

Conread position: 1-394
Cow position:
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 299

Conread position: 1-397
Cow position:
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 26

Conread position: 1-397
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 222

Conread position: 1-397
Cow position:
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 90

Conread position: 1-398
Cow position:
Alignm length: 409
Alignm identity: 273
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 160

Conread position: 1-398
Cow position:
Alignm length: 410
Alignm identity: 278
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 285

Conread position: 1-398
Cow position:
Alignm length: 411
Alignm identity: 272
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 147, 350

Conread position: 1-398
Cow position:
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 43

Conread position: 1-399
Cow position:
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 102

Conread position: 1-399
Cow position:
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-399
Cow position:
Alignm length: 410
Alignm identity: 276
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 146, 36

Conread position: 1-399
Cow position:
Alignm length: 421
Alignm identity: 287
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 101

Conread position: 1-399
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 58

Conread position: 1-399
Cow position:
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 55

Conread position: 1-399
Cow position:
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 302

Conread position: 1-399
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 241

Conread position: 1-399
Cow position:
Alignm length: 425
Alignm identity: 292
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 66, 113

Conread position: 1-399
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 96, 44

Conread position: 1-399
Cow position:
Alignm length: 415
Alignm identity: 279
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 66, 222

Conread position: 1-399
Cow position:
Alignm length: 420
Alignm identity: 285
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 143, 66

Conread position: 1-399
Cow position:
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 1-399
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 134, 79

Conread position: 2-228
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 44

Conread position: 2-278
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 2-293
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 143, 119

Conread position: 2-295
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 101, 7

Conread position: 2-399
Cow position:
Alignm length: 410
Alignm identity: 276
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 71

Conread position: 2-399
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 46

Conread position: 2-399
Cow position:
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 3-187
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 3-253
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 87

Conread position: 3-261
Cow position:
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 6

Conread position: 3-280
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 55

Conread position: 3-280
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 220

Conread position: 3-280
Cow position:
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 44

Conread position: 3-282
Cow position:
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 12

Conread position: 3-291
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 99

Conread position: 3-293
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 55

Conread position: 3-293
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 6

Conread position: 3-320
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 294

Conread position: 3-336
Cow position:
Alignm length: 348
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 97, 12

Conread position: 3-382
Cow position:
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 304

Conread position: 3-397
Cow position:
Alignm length: 406
Alignm identity: 276
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 12

Conread position: 3-399
Cow position:
Alignm length: 421
Alignm identity: 287
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 53

Conread position: 5-336
Cow position:
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 295

Conread position: 6-399
Cow position:
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 96

Conread position: 7-279
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 48

Conread position: 7-296
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 7-334
Cow position:
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 49

Conread position: 8-336
Cow position:
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 95, 115

Conread position: 10-399
Cow position:
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 33

Conread position: 11-253
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 97

Conread position: 17-307
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 104

Conread position: 18-252
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 202

Conread position: 21-399
Cow position:
Alignm length: 415
Alignm identity: 287
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 62

Conread position: 25-296
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 78, 31

Conread position: 25-399
Cow position:
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 78

Conread position: 37-261
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 80

Conread position: 37-280
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 183

Conread position: 37-336
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 46

Conread position: 37-384
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 53-398
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 139

Conread position: 53-399
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 8

Conread position: 56-255
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 19

Conread position: 56-278
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 34

Conread position: 56-286
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 59-295
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 26

Conread position: 59-296
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 5, 104

Conread position: 59-298
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 168

Conread position: 59-336
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 141

Conread position: 59-393
Cow position:
Alignm length: 343
Alignm identity: 233
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 5, 147

Conread position: 61-399
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 224

Conread position: 63-297
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 120

Conread position: 64-311
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 221

Conread position: 64-320
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 135

Conread position: 64-399
Cow position:
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 168

Conread position: 65-291
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 80, 0

Conread position: 66-296
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 78, 201

Conread position: 66-296
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 144

Conread position: 67-399
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 77, 35

Conread position: 67-399
Cow position:
Alignm length: 347
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 222

Conread position: 67-399
Cow position:
Alignm length: 352
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 234

Conread position: 68-399
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 236

Conread position: 70-296
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 58

Conread position: 72-186
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 31

Conread position: 73-286
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 73-292
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 73-296
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 148

Conread position: 74-334
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 12

Conread position: 79-208
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 79-261
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 80-279
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 143

Conread position: 80-291
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 80-294
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 150

Conread position: 80-336
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 64, 22

Conread position: 80-398
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 216

Conread position: 82-393
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 143

Conread position: 84-293
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 141

Conread position: 86-277
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 70, 16

Conread position: 88-399
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 62, 208

Conread position: 90-399
Cow position:
Alignm length: 323
Alignm identity: 214
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 156

Conread position: 93-300
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 94-281
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 96-279
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 96-280
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 118

Conread position: 96-295
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 102-279
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 102-336
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 41

Conread position: 152-387
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 5

Conread position: 164-394
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 97, 15

Conread position: 178-397
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 115

Show alignments to all cow chromosomes.