Cow genome map

Conread name: reje03b_g17.y1

Conread position: 1-244
Cow position: chrX:42855107-42855365 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 55

Conread position: 1-258
Cow position: chrX:4123531-4123802 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-261
Cow position: chrX:45658384-45658112 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 1-277
Cow position: chrX:12249497-12249786 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 76, 224

Conread position: 1-280
Cow position: chrX:21665895-21665605 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 41

Conread position: 1-282
Cow position: chrX:15485929-15485633 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 55

Conread position: 1-283
Cow position: chrX:15545593-15545884 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 101

Conread position: 1-291
Cow position: chrX:13868393-13868703 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 143, 55

Conread position: 1-293
Cow position: chrX:19188632-19188937 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 224

Conread position: 1-293
Cow position: chrX:38227394-38227090 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 165

Conread position: 1-296
Cow position: chrX:11614417-11614704 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 139

Conread position: 1-296
Cow position: chrX:21592982-21593293 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 55

Conread position: 1-296
Cow position: chrX:43527199-43527515 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 49

Conread position: 1-298
Cow position: chrX:35681031-35681347 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 65, 303

Conread position: 1-299
Cow position: chrX:8796947-8797261 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 15

Conread position: 1-300
Cow position: chrX:41743609-41743919 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 220

Conread position: 1-312
Cow position: chrX:39704401-39704717 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 24

Conread position: 1-335
Cow position: chrX:41198782-41199145 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 324

Conread position: 1-335
Cow position: chrX:42171600-42171255 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 146, 55

Conread position: 1-336
Cow position: chrX:5017710-5017371 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 71

Conread position: 1-336
Cow position: chrX:17497792-17498125 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 183

Conread position: 1-337
Cow position: chrX:14924696-14925041 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 125

Conread position: 1-351
Cow position: chrX:13785682-13785305 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 236

Conread position: 1-387
Cow position: chrX:33855544-33855128 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 277
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 21

Conread position: 1-388
Cow position: chrX:34401694-34402092 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 28

Conread position: 1-390
Cow position: chrX:20029943-20030348 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 268
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 233

Conread position: 1-392
Cow position: chrX:40481176-40480776 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 20

Conread position: 1-393
Cow position: chrX:3654304-3654705 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 279
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 48

Conread position: 1-394
Cow position: chrX:34663163-34662748 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 290
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 73, 175

Conread position: 1-394
Cow position: chrX:40827051-40826653 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 1-395
Cow position: chrX:22821110-22821517 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 264
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 298

Conread position: 1-397
Cow position: chrX:7571602-7572006 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 218

Conread position: 1-398
Cow position: chrX:21063982-21064385 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 237

Conread position: 1-398
Cow position: chrX:23564101-23563689 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 296

Conread position: 1-398
Cow position: chrX:31949235-31948833 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 241

Conread position: 1-399
Cow position: chrX:5872009-5872420 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 58

Conread position: 1-399
Cow position: chrX:11082918-11082519 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 243

Conread position: 1-399
Cow position: chrX:11844542-11844138 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 55

Conread position: 1-399
Cow position: chrX:12309692-12309283 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 55

Conread position: 1-399
Cow position: chrX:14599229-14599636 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 286
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 27

Conread position: 1-399
Cow position: chrX:15147488-15147094 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 34

Conread position: 1-399
Cow position: chrX:18695225-18694828 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 292

Conread position: 1-399
Cow position: chrX:27705289-27705689 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 101

Conread position: 1-399
Cow position: chrX:31250088-31250491 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 9

Conread position: 1-399
Cow position: chrX:31436176-31436577 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 222

Conread position: 1-399
Cow position: chrX:31443124-31442726 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 23

Conread position: 1-399
Cow position: chrX:34441751-34441351 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 1-399
Cow position: chrX:35268586-35268964 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 127

Conread position: 1-399
Cow position: chrX:42247480-42247079 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 55

Conread position: 2-296
Cow position: chrX:42462051-42461738 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 225

Conread position: 2-335
Cow position: chrX:37843417-37843758 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 266

Conread position: 2-399
Cow position: chrX:4044161-4043764 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 58, 201

Conread position: 2-399
Cow position: chrX:20340194-20339791 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 157

Conread position: 3-187
Cow position: chrX:1655178-1655363 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 3-275
Cow position: chrX:40452515-40452225 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 3-278
Cow position: chrX:28866291-28866017 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 47

Conread position: 3-280
Cow position: chrX:45113334-45113608 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 45

Conread position: 3-290
Cow position: chrX:10866169-10865868 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 225

Conread position: 3-341
Cow position: chrX:12115739-12116092 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 72

Conread position: 3-350
Cow position: chrX:28845542-28845887 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 148

Conread position: 3-398
Cow position: chrX:47873643-47873234 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 131

Conread position: 3-399
Cow position: chrX:151599-152004 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 298

Conread position: 3-399
Cow position: chrX:161126-161515 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 114

Conread position: 3-399
Cow position: chrX:6543954-6544357 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 285

Conread position: 3-399
Cow position: chrX:15007453-15007046 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 300

Conread position: 3-399
Cow position: chrX:30133626-30133215 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 94, 141

Conread position: 3-399
Cow position: chrX:44054503-44054905 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 53

Conread position: 3-399
Cow position: chrX:47967298-47967710 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 66

Conread position: 4-300
Cow position: chrX:23061153-23061445 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 150

Conread position: 5-254
Cow position: chrX:35937369-35937120 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 160, 51

Conread position: 5-349
Cow position: chrX:6234735-6234398 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 139, 80

Conread position: 5-399
Cow position: chrX:45089137-45089549 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 129

Conread position: 6-261
Cow position: chrX:38967353-38967615 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 7-342
Cow position: chrX:19015144-19015482 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 211

Conread position: 12-336
Cow position: chrX:25237885-25238219 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 68

Conread position: 17-398
Cow position: chrX:46723029-46722632 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 289

Conread position: 22-394
Cow position: chrX:2467597-2467982 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 48

Conread position: 24-296
Cow position: chrX:42874697-42874989 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 25-296
Cow position: chrX:9997611-9997328 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 30

Conread position: 27-286
Cow position: chrX:8925428-8925698 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 29

Conread position: 38-297
Cow position: chrX:32020389-32020113 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 39-336
Cow position: chrX:40647712-40648026 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 271

Conread position: 40-181
Cow position: chrX:47247173-47247029 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 7

Conread position: 46-399
Cow position: chrX:20151591-20151959 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 321

Conread position: 48-387
Cow position: chrX:45598861-45598514 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 253

Conread position: 51-280
Cow position: chrX:28878416-28878179 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 115

Conread position: 51-388
Cow position: chrX:24366083-24365729 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 95, 36

Conread position: 53-296
Cow position: chrX:23497915-23497661 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 49

Conread position: 53-296
Cow position: chrX:42339188-42338943 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 50, 209

Conread position: 53-398
Cow position: chrX:44873802-44873459 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 25

Conread position: 55-336
Cow position: chrX:9635430-9635150 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 7

Conread position: 56-187
Cow position: chrX:5556080-5555946 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 63-296
Cow position: chrX:35284375-35284625 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 33, 163

Conread position: 64-261
Cow position: chrX:21663068-21663272 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 56

Conread position: 64-292
Cow position: chrX:30833079-30832847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 80, 35

Conread position: 65-246
Cow position: chrX:6639884-6640082 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 65-383
Cow position: chrX:39558588-39558261 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 231

Conread position: 67-286
Cow position: chrX:19019348-19019110 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 17

Conread position: 67-320
Cow position: chrX:41167202-41166938 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 235

Conread position: 67-351
Cow position: chrX:26876119-26875826 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 80, 49

Conread position: 68-298
Cow position: chrX:40116188-40116422 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 34

Conread position: 69-295
Cow position: chrX:11589828-11589583 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 69-399
Cow position: chrX:27394250-27393923 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 219

Conread position: 71-350
Cow position: chrX:11455286-11454988 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 35

Conread position: 71-397
Cow position: chrX:11856195-11856531 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 49

Conread position: 71-397
Cow position: chrX:48010360-48010705 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 237

Conread position: 71-399
Cow position: chrX:30963106-30962774 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 223

Conread position: 72-386
Cow position: chrX:12405602-12405291 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 30

Conread position: 73-262
Cow position: chrX:2206776-2206582 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 143

Conread position: 73-291
Cow position: chrX:44961515-44961749 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 153

Conread position: 73-398
Cow position: chrX:23514250-23513915 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 49

Conread position: 73-399
Cow position: chrX:6278738-6278395 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 154

Conread position: 73-399
Cow position: chrX:21004452-21004787 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 31

Conread position: 73-399
Cow position: chrX:34543555-34543887 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 140

Conread position: 73-399
Cow position: chrX:36975717-36976054 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 27, 189

Conread position: 73-399
Cow position: chrX:38549216-38549550 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 125

Conread position: 78-262
Cow position: chrX:48684450-48684257 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 143

Conread position: 80-337
Cow position: chrX:29509669-29509397 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 227

Conread position: 81-252
Cow position: chrX:16324187-16324006 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 81-299
Cow position: chrX:10437889-10437662 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 173

Conread position: 82-296
Cow position: chrX:6488363-6488585 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 123

Conread position: 82-387
Cow position: chrX:6265809-6265508 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 18, 102

Conread position: 83-399
Cow position: chrX:46073044-46072714 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 142

Conread position: 84-399
Cow position: chrX:23091660-23091974 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 134

Conread position: 85-187
Cow position: chrX:29193788-29193891 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 85-399
Cow position: chrX:29602053-29601725 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 218

Conread position: 85-399
Cow position: chrX:37574636-37574943 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 134

Conread position: 93-399
Cow position: chrX:8869623-8869299 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 210

Conread position: 95-399
Cow position: chrX:27174785-27175101 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 194

Conread position: 96-315
Cow position: chrX:29542427-29542191 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 96-399
Cow position: chrX:34411631-34411949 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 131

Conread position: 97-340
Cow position: chrX:26285772-26286025 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 139

Conread position: 98-399
Cow position: chrX:46587611-46587925 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 208

Conread position: 99-399
Cow position: chrX:33000697-33001008 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 5, 126

Conread position: 103-399
Cow position: chrX:1499468-1499768 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 117

Conread position: 106-394
Cow position: chrX:29545078-29544779 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 118

Conread position: 116-399
Cow position: chrX:42235722-42235421 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 191

Conread position: 139-399
Cow position: chrX:29680422-29680158 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 9

Conread position: 140-399
Cow position: chrX:27227962-27228229 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 164

Conread position: 144-399
Cow position: chrX:41068570-41068828 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 15

Conread position: 186-399
Cow position: chrX:35885835-35885624 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 99

Show alignments to all cow chromosomes.