Cow genome map
| Conread name: | reje03b_g17.y1 |
| Conread position: | 1-244 |
| Cow position: | chrX:42855107-42855365 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 1-258 |
| Cow position: | chrX:4123531-4123802 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-261 |
| Cow position: | chrX:45658384-45658112 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-277 |
| Cow position: | chrX:12249497-12249786 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 76, 224 |
| Conread position: | 1-280 |
| Cow position: | chrX:21665895-21665605 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 41 |
| Conread position: | 1-282 |
| Cow position: | chrX:15485929-15485633 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 1-283 |
| Cow position: | chrX:15545593-15545884 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 101 |
| Conread position: | 1-291 |
| Cow position: | chrX:13868393-13868703 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 1-293 |
| Cow position: | chrX:19188632-19188937 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 224 |
| Conread position: | 1-293 |
| Cow position: | chrX:38227394-38227090 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 165 |
| Conread position: | 1-296 |
| Cow position: | chrX:11614417-11614704 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 139 |
| Conread position: | 1-296 |
| Cow position: | chrX:21592982-21593293 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 1-296 |
| Cow position: | chrX:43527199-43527515 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 1-298 |
| Cow position: | chrX:35681031-35681347 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 65, 303 |
| Conread position: | 1-299 |
| Cow position: | chrX:8796947-8797261 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 15 |
| Conread position: | 1-300 |
| Cow position: | chrX:41743609-41743919 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 220 |
| Conread position: | 1-312 |
| Cow position: | chrX:39704401-39704717 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 1-335 |
| Cow position: | chrX:41198782-41199145 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 324 |
| Conread position: | 1-335 |
| Cow position: | chrX:42171600-42171255 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 146, 55 |
| Conread position: | 1-336 |
| Cow position: | chrX:5017710-5017371 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 71 |
| Conread position: | 1-336 |
| Cow position: | chrX:17497792-17498125 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 183 |
| Conread position: | 1-337 |
| Cow position: | chrX:14924696-14925041 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 125 |
| Conread position: | 1-351 |
| Cow position: | chrX:13785682-13785305 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 236 |
| Conread position: | 1-387 |
| Cow position: | chrX:33855544-33855128 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 1-388 |
| Cow position: | chrX:34401694-34402092 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 1-390 |
| Cow position: | chrX:20029943-20030348 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 233 |
| Conread position: | 1-392 |
| Cow position: | chrX:40481176-40480776 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 1-393 |
| Cow position: | chrX:3654304-3654705 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 48 |
| Conread position: | 1-394 |
| Cow position: | chrX:34663163-34662748 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 73, 175 |
| Conread position: | 1-394 |
| Cow position: | chrX:40827051-40826653 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 145 |
| Conread position: | 1-395 |
| Cow position: | chrX:22821110-22821517 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 298 |
| Conread position: | 1-397 |
| Cow position: | chrX:7571602-7572006 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 218 |
| Conread position: | 1-398 |
| Cow position: | chrX:21063982-21064385 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 237 |
| Conread position: | 1-398 |
| Cow position: | chrX:23564101-23563689 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 296 |
| Conread position: | 1-398 |
| Cow position: | chrX:31949235-31948833 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 241 |
| Conread position: | 1-399 |
| Cow position: | chrX:5872009-5872420 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 1-399 |
| Cow position: | chrX:11082918-11082519 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 243 |
| Conread position: | 1-399 |
| Cow position: | chrX:11844542-11844138 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 55 |
| Conread position: | 1-399 |
| Cow position: | chrX:12309692-12309283 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 55 |
| Conread position: | 1-399 |
| Cow position: | chrX:14599229-14599636 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 286 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 1-399 |
| Cow position: | chrX:15147488-15147094 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 34 |
| Conread position: | 1-399 |
| Cow position: | chrX:18695225-18694828 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 292 |
| Conread position: | 1-399 |
| Cow position: | chrX:27705289-27705689 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 101 |
| Conread position: | 1-399 |
| Cow position: | chrX:31250088-31250491 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 1-399 |
| Cow position: | chrX:31436176-31436577 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 222 |
| Conread position: | 1-399 |
| Cow position: | chrX:31443124-31442726 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 23 |
| Conread position: | 1-399 |
| Cow position: | chrX:34441751-34441351 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 54 |
| Conread position: | 1-399 |
| Cow position: | chrX:35268586-35268964 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 127 |
| Conread position: | 1-399 |
| Cow position: | chrX:42247480-42247079 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 2-296 |
| Cow position: | chrX:42462051-42461738 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 225 |
| Conread position: | 2-335 |
| Cow position: | chrX:37843417-37843758 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 266 |
| Conread position: | 2-399 |
| Cow position: | chrX:4044161-4043764 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 281 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 58, 201 |
| Conread position: | 2-399 |
| Cow position: | chrX:20340194-20339791 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 157 |
| Conread position: | 3-187 |
| Cow position: | chrX:1655178-1655363 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-275 |
| Cow position: | chrX:40452515-40452225 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 3-278 |
| Cow position: | chrX:28866291-28866017 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 3-280 |
| Cow position: | chrX:45113334-45113608 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 3-290 |
| Cow position: | chrX:10866169-10865868 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 225 |
| Conread position: | 3-341 |
| Cow position: | chrX:12115739-12116092 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 3-350 |
| Cow position: | chrX:28845542-28845887 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 148 |
| Conread position: | 3-398 |
| Cow position: | chrX:47873643-47873234 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 100, 131 |
| Conread position: | 3-399 |
| Cow position: | chrX:151599-152004 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 298 |
| Conread position: | 3-399 |
| Cow position: | chrX:161126-161515 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 114 |
| Conread position: | 3-399 |
| Cow position: | chrX:6543954-6544357 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 285 |
| Conread position: | 3-399 |
| Cow position: | chrX:15007453-15007046 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 300 |
| Conread position: | 3-399 |
| Cow position: | chrX:30133626-30133215 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 141 |
| Conread position: | 3-399 |
| Cow position: | chrX:44054503-44054905 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 3-399 |
| Cow position: | chrX:47967298-47967710 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 66 |
| Conread position: | 4-300 |
| Cow position: | chrX:23061153-23061445 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 150 |
| Conread position: | 5-254 |
| Cow position: | chrX:35937369-35937120 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 160, 51 |
| Conread position: | 5-349 |
| Cow position: | chrX:6234735-6234398 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 139, 80 |
| Conread position: | 5-399 |
| Cow position: | chrX:45089137-45089549 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 72, 129 |
| Conread position: | 6-261 |
| Cow position: | chrX:38967353-38967615 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 7-342 |
| Cow position: | chrX:19015144-19015482 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 211 |
| Conread position: | 12-336 |
| Cow position: | chrX:25237885-25238219 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 68 |
| Conread position: | 17-398 |
| Cow position: | chrX:46723029-46722632 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 289 |
| Conread position: | 22-394 |
| Cow position: | chrX:2467597-2467982 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 24-296 |
| Cow position: | chrX:42874697-42874989 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 25-296 |
| Cow position: | chrX:9997611-9997328 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 27-286 |
| Cow position: | chrX:8925428-8925698 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 38-297 |
| Cow position: | chrX:32020389-32020113 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 39-336 |
| Cow position: | chrX:40647712-40648026 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 271 |
| Conread position: | 40-181 |
| Cow position: | chrX:47247173-47247029 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 46-399 |
| Cow position: | chrX:20151591-20151959 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 321 |
| Conread position: | 48-387 |
| Cow position: | chrX:45598861-45598514 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 253 |
| Conread position: | 51-280 |
| Cow position: | chrX:28878416-28878179 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 51-388 |
| Cow position: | chrX:24366083-24365729 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 53-296 |
| Cow position: | chrX:23497915-23497661 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 49 |
| Conread position: | 53-296 |
| Cow position: | chrX:42339188-42338943 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 209 |
| Conread position: | 53-398 |
| Cow position: | chrX:44873802-44873459 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 55-336 |
| Cow position: | chrX:9635430-9635150 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 56-187 |
| Cow position: | chrX:5556080-5555946 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 63-296 |
| Cow position: | chrX:35284375-35284625 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 64-261 |
| Cow position: | chrX:21663068-21663272 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 64-292 |
| Cow position: | chrX:30833079-30832847 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 80, 35 |
| Conread position: | 65-246 |
| Cow position: | chrX:6639884-6640082 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 65-383 |
| Cow position: | chrX:39558588-39558261 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 32, 231 |
| Conread position: | 67-286 |
| Cow position: | chrX:19019348-19019110 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 67-320 |
| Cow position: | chrX:41167202-41166938 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 235 |
| Conread position: | 67-351 |
| Cow position: | chrX:26876119-26875826 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 80, 49 |
| Conread position: | 68-298 |
| Cow position: | chrX:40116188-40116422 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 69-295 |
| Cow position: | chrX:11589828-11589583 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 69-399 |
| Cow position: | chrX:27394250-27393923 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 219 |
| Conread position: | 71-350 |
| Cow position: | chrX:11455286-11454988 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 71-397 |
| Cow position: | chrX:11856195-11856531 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 71-397 |
| Cow position: | chrX:48010360-48010705 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 237 |
| Conread position: | 71-399 |
| Cow position: | chrX:30963106-30962774 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 223 |
| Conread position: | 72-386 |
| Cow position: | chrX:12405602-12405291 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 30 |
| Conread position: | 73-262 |
| Cow position: | chrX:2206776-2206582 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 30, 143 |
| Conread position: | 73-291 |
| Cow position: | chrX:44961515-44961749 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 73-398 |
| Cow position: | chrX:23514250-23513915 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 73-399 |
| Cow position: | chrX:6278738-6278395 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 73-399 |
| Cow position: | chrX:21004452-21004787 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 73-399 |
| Cow position: | chrX:34543555-34543887 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 24, 140 |
| Conread position: | 73-399 |
| Cow position: | chrX:36975717-36976054 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 27, 189 |
| Conread position: | 73-399 |
| Cow position: | chrX:38549216-38549550 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 78-262 |
| Cow position: | chrX:48684450-48684257 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 143 |
| Conread position: | 80-337 |
| Cow position: | chrX:29509669-29509397 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 227 |
| Conread position: | 81-252 |
| Cow position: | chrX:16324187-16324006 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 81-299 |
| Cow position: | chrX:10437889-10437662 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 82-296 |
| Cow position: | chrX:6488363-6488585 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 82-387 |
| Cow position: | chrX:6265809-6265508 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 83-399 |
| Cow position: | chrX:46073044-46072714 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 142 |
| Conread position: | 84-399 |
| Cow position: | chrX:23091660-23091974 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 85-187 |
| Cow position: | chrX:29193788-29193891 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 85-399 |
| Cow position: | chrX:29602053-29601725 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 218 |
| Conread position: | 85-399 |
| Cow position: | chrX:37574636-37574943 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 93-399 |
| Cow position: | chrX:8869623-8869299 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 210 |
| Conread position: | 95-399 |
| Cow position: | chrX:27174785-27175101 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 194 |
| Conread position: | 96-315 |
| Cow position: | chrX:29542427-29542191 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 96-399 |
| Cow position: | chrX:34411631-34411949 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 131 |
| Conread position: | 97-340 |
| Cow position: | chrX:26285772-26286025 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 98-399 |
| Cow position: | chrX:46587611-46587925 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 208 |
| Conread position: | 99-399 |
| Cow position: | chrX:33000697-33001008 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 5, 126 |
| Conread position: | 103-399 |
| Cow position: | chrX:1499468-1499768 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 106-394 |
| Cow position: | chrX:29545078-29544779 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 116-399 |
| Cow position: | chrX:42235722-42235421 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 191 |
| Conread position: | 139-399 |
| Cow position: | chrX:29680422-29680158 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 140-399 |
| Cow position: | chrX:27227962-27228229 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 164 |
| Conread position: | 144-399 |
| Cow position: | chrX:41068570-41068828 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 186-399 |
| Cow position: | chrX:35885835-35885624 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 99 |
Show alignments to all cow chromosomes.