Cow genome map

Conread name: reje28b_a18.y1

Conread position: 317-588
Cow position: chr11:33409000-33409279 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 50

Conread position: 352-580
Cow position: chr11:73353857-73354069 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 369-588
Cow position: chr11:67312979-67312763 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 99, 42

Conread position: 370-583
Cow position: chr11:17083119-17083322 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 52

Conread position: 370-588
Cow position: chr11:39250157-39249955 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 379-576
Cow position: chr11:66104209-66104401 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 41

Conread position: 379-577
Cow position: chr11:63485116-63484932 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 379-584
Cow position: chr11:32782690-32782897 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 54, 41

Conread position: 379-584
Cow position: chr11:39854838-39855027 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 379-588
Cow position: chr11:63435709-63435504 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 44

Conread position: 379-588
Cow position: chr11:63917286-63917494 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 65

Conread position: 379-589
Cow position: chr11:74379077-74378856 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 41

Conread position: 380-581
Cow position: chr11:46999169-46998972 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 43

Conread position: 380-582
Cow position: chr11:21843956-21844144 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 380-584
Cow position: chr11:41313479-41313670 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 380-588
Cow position: chr11:13042965-13043163 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 381-571
Cow position: chr11:4436943-4436747 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 39

Conread position: 381-588
Cow position: chr11:50073137-50072920 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 42

Conread position: 382-581
Cow position: chr11:17074047-17074229 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 383-515
Cow position: chr11:70824530-70824658 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 37

Conread position: 383-571
Cow position: chr11:85186348-85186528 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 383-582
Cow position: chr11:60486236-60486430 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 85, 37

Conread position: 384-583
Cow position: chr11:48474888-48474691 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 42

Conread position: 385-588
Cow position: chr11:41549159-41549350 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 155, 26

Conread position: 386-587
Cow position: chr11:7874317-7874122 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 34

Conread position: 387-558
Cow position: chr11:37042150-37041984 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 387-575
Cow position: chr11:61454327-61454521 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 33

Conread position: 387-583
Cow position: chr11:39060429-39060614 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 387-583
Cow position: chr11:62812776-62812962 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 25

Conread position: 387-583
Cow position: chr11:71345140-71345336 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 33

Conread position: 387-584
Cow position: chr11:86895548-86895363 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 387-585
Cow position: chr11:77758585-77758775 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 387-588
Cow position: chr11:3896522-3896716 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 387-588
Cow position: chr11:65826578-65826768 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 388-532
Cow position: chr11:2830831-2830695 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-546
Cow position: chr11:62102271-62102423 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 32

Conread position: 388-561
Cow position: chr11:38223618-38223778 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 388-563
Cow position: chr11:77208262-77208082 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 32

Conread position: 388-564
Cow position: chr11:18777418-18777592 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 32

Conread position: 388-570
Cow position: chr11:43360612-43360781 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 388-571
Cow position: chr11:9836280-9836457 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 388-571
Cow position: chr11:58186047-58185882 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 388-572
Cow position: chr11:26535959-26535786 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 32

Conread position: 388-572
Cow position: chr11:52297048-52297222 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 388-572
Cow position: chr11:77241877-77241704 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 388-574
Cow position: chr11:71456005-71455821 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 32

Conread position: 388-575
Cow position: chr11:17721626-17721806 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 388-575
Cow position: chr11:18924922-18924741 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 32

Conread position: 388-575
Cow position: chr11:57767364-57767186 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 388-575
Cow position: chr11:63498956-63499131 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 388-577
Cow position: chr11:65607516-65607695 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 388-578
Cow position: chr11:49210642-49210829 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 32

Conread position: 388-578
Cow position: chr11:79869519-79869318 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 89

Conread position: 388-579
Cow position: chr11:1932313-1932500 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 32

Conread position: 388-580
Cow position: chr11:40608418-40608603 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 34

Conread position: 388-581
Cow position: chr11:11125840-11125653 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 23

Conread position: 388-581
Cow position: chr11:47110431-47110242 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 32

Conread position: 388-583
Cow position: chr11:15382320-15382515 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 32

Conread position: 388-583
Cow position: chr11:17227476-17227654 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr11:18699045-18698867 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr11:20205683-20205864 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr11:27248663-27248481 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr11:29786318-29786511 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 32

Conread position: 388-583
Cow position: chr11:30172474-30172297 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr11:35212996-35213180 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 388-583
Cow position: chr11:41576698-41576880 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr11:42067039-42066847 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 164, 32

Conread position: 388-583
Cow position: chr11:44032181-44031999 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 388-583
Cow position: chr11:82730809-82731010 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 34

Conread position: 388-584
Cow position: chr11:28078664-28078490 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 388-584
Cow position: chr11:46922712-46922899 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 119, 32

Conread position: 388-584
Cow position: chr11:48650161-48649959 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 32

Conread position: 388-584
Cow position: chr11:49396351-49396539 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 388-584
Cow position: chr11:52415624-52415422 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 32

Conread position: 388-584
Cow position: chr11:62742473-62742656 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 388-584
Cow position: chr11:69307705-69307500 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 23

Conread position: 388-584
Cow position: chr11:73983815-73984017 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 32

Conread position: 388-584
Cow position: chr11:80412834-80413026 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 32

Conread position: 388-587
Cow position: chr11:8683903-8684096 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 388-587
Cow position: chr11:38334696-38334507 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-587
Cow position: chr11:41215908-41215716 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 32

Conread position: 388-588
Cow position: chr11:4199449-4199254 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 32

Conread position: 388-588
Cow position: chr11:6233703-6233897 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 388-588
Cow position: chr11:15369564-15369370 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 388-588
Cow position: chr11:17831032-17831238 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 34

Conread position: 388-588
Cow position: chr11:21886005-21885816 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 388-588
Cow position: chr11:32398816-32398621 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 32

Conread position: 388-588
Cow position: chr11:46427232-46427425 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 23

Conread position: 388-588
Cow position: chr11:53778795-53778599 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 70, 32

Conread position: 388-588
Cow position: chr11:67600953-67600767 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-588
Cow position: chr11:70206490-70206303 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 388-588
Cow position: chr11:70978560-70978751 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 20

Conread position: 388-588
Cow position: chr11:72375491-72375700 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 32

Conread position: 388-588
Cow position: chr11:79466397-79466194 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 32

Conread position: 388-589
Cow position: chr11:32260706-32260516 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 388-590
Cow position: chr11:36092744-36092936 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 153, 32

Conread position: 388-590
Cow position: chr11:74152574-74152773 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 389-541
Cow position: chr11:51683390-51683245 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 389-557
Cow position: chr11:35732909-35733070 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-558
Cow position: chr11:26057473-26057638 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 31

Conread position: 389-564
Cow position: chr11:19147968-19148130 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 389-565
Cow position: chr11:63849776-63849946 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 31

Conread position: 389-569
Cow position: chr11:41278361-41278187 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 389-570
Cow position: chr11:3714996-3714821 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 389-570
Cow position: chr11:53817029-53816853 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 93, 30

Conread position: 389-572
Cow position: chr11:13940361-13940183 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 31

Conread position: 389-572
Cow position: chr11:30322320-30322494 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 389-578
Cow position: chr11:36300410-36300585 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 389-579
Cow position: chr11:30986810-30986633 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 389-579
Cow position: chr11:52380698-52380880 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 389-579
Cow position: chr11:70483677-70483860 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 389-580
Cow position: chr11:64781262-64781077 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 389-581
Cow position: chr11:25620216-25620407 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 165, 31

Conread position: 389-583
Cow position: chr11:1980091-1980280 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 31

Conread position: 389-583
Cow position: chr11:13500184-13500003 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 389-583
Cow position: chr11:15366804-15366985 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 389-583
Cow position: chr11:19591822-19592007 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 98, 22

Conread position: 389-583
Cow position: chr11:25604127-25603935 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 389-583
Cow position: chr11:25791519-25791708 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 190, 31

Conread position: 389-583
Cow position: chr11:45619524-45619340 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 389-583
Cow position: chr11:60296912-60296718 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 31

Conread position: 389-583
Cow position: chr11:66939417-66939605 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 389-583
Cow position: chr11:87171902-87172089 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 389-584
Cow position: chr11:30165685-30165496 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 389-584
Cow position: chr11:37099998-37100182 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 389-584
Cow position: chr11:68913317-68913127 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 31

Conread position: 389-584
Cow position: chr11:77017404-77017228 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 389-584
Cow position: chr11:79548759-79548950 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 47

Conread position: 389-585
Cow position: chr11:30209649-30209834 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 389-587
Cow position: chr11:1380851-1380659 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr11:16315048-16314856 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 95, 31

Conread position: 389-587
Cow position: chr11:18119676-18119485 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 29

Conread position: 389-587
Cow position: chr11:19247031-19247215 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 389-587
Cow position: chr11:21830037-21830226 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 389-587
Cow position: chr11:21893975-21894174 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 31

Conread position: 389-587
Cow position: chr11:25968679-25968867 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 389-587
Cow position: chr11:30638778-30638966 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr11:34968439-34968630 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 31

Conread position: 389-587
Cow position: chr11:35351859-35352055 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 31

Conread position: 389-587
Cow position: chr11:37804378-37804570 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 389-587
Cow position: chr11:42084499-42084692 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 31

Conread position: 389-587
Cow position: chr11:45350336-45350528 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr11:55334093-55333893 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 31

Conread position: 389-587
Cow position: chr11:55744643-55744451 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr11:59024179-59024376 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 33

Conread position: 389-587
Cow position: chr11:74427853-74427661 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 389-587
Cow position: chr11:78380895-78381077 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-588
Cow position: chr11:2084319-2084126 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 389-588
Cow position: chr11:6395927-6395738 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 389-588
Cow position: chr11:6633900-6633693 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 31

Conread position: 389-588
Cow position: chr11:17517573-17517381 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 79, 22

Conread position: 389-588
Cow position: chr11:35109366-35109555 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 152, 22

Conread position: 389-588
Cow position: chr11:39462793-39462606 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 389-588
Cow position: chr11:49153114-49152932 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 389-589
Cow position: chr11:12555130-12555324 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 389-589
Cow position: chr11:30708679-30708488 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 105, 31

Conread position: 389-590
Cow position: chr11:40792519-40792724 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 34

Conread position: 389-591
Cow position: chr11:6319957-6320153 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 31

Conread position: 390-570
Cow position: chr11:42206589-42206422 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 390-574
Cow position: chr11:79666089-79666265 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 390-575
Cow position: chr11:49149219-49149044 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 153, 30

Conread position: 390-580
Cow position: chr11:48272382-48272191 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 390-580
Cow position: chr11:62620549-62620367 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 390-581
Cow position: chr11:41980031-41980215 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 21

Conread position: 390-581
Cow position: chr11:49207884-49207700 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 390-583
Cow position: chr11:8437517-8437706 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 390-583
Cow position: chr11:46746809-46746619 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 36

Conread position: 390-587
Cow position: chr11:41213225-41213026 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 30

Conread position: 390-587
Cow position: chr11:57503653-57503466 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 30

Conread position: 390-588
Cow position: chr11:35347578-35347770 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 390-588
Cow position: chr11:43914466-43914274 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 390-588
Cow position: chr11:47837492-47837303 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 27

Conread position: 390-588
Cow position: chr11:66099684-66099880 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 30

Conread position: 390-588
Cow position: chr11:77013943-77013767 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 391-549
Cow position: chr11:43641560-43641408 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 391-553
Cow position: chr11:63475499-63475655 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 391-556
Cow position: chr11:33369324-33369165 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 391-560
Cow position: chr11:68570209-68570370 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 391-569
Cow position: chr11:44620125-44619956 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 391-569
Cow position: chr11:70600655-70600827 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 391-571
Cow position: chr11:5218993-5219160 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 391-571
Cow position: chr11:26343274-26343101 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 391-571
Cow position: chr11:33374138-33373965 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 391-572
Cow position: chr11:68909681-68909857 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 29

Conread position: 391-573
Cow position: chr11:29677379-29677204 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 391-573
Cow position: chr11:66041444-66041276 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 391-575
Cow position: chr11:60720282-60720460 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 391-576
Cow position: chr11:21173265-21173443 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 391-576
Cow position: chr11:58102586-58102766 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 29

Conread position: 391-576
Cow position: chr11:71854112-71854284 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 391-577
Cow position: chr11:36920406-36920584 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 23

Conread position: 391-577
Cow position: chr11:80586438-80586268 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 391-579
Cow position: chr11:19578850-19579024 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 391-581
Cow position: chr11:34644830-34644645 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 29

Conread position: 391-582
Cow position: chr11:1067266-1067451 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 391-583
Cow position: chr11:3740136-3739941 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 29

Conread position: 391-583
Cow position: chr11:12080015-12079824 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 29

Conread position: 391-583
Cow position: chr11:13863930-13864117 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 29

Conread position: 391-583
Cow position: chr11:36521052-36520862 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 141, 29

Conread position: 391-584
Cow position: chr11:17889555-17889744 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 148, 29

Conread position: 391-584
Cow position: chr11:42016467-42016652 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 391-587
Cow position: chr11:8670189-8669994 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 29

Conread position: 391-587
Cow position: chr11:13592911-13592719 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 77, 29

Conread position: 391-587
Cow position: chr11:21508183-21507986 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 33

Conread position: 391-587
Cow position: chr11:25783887-25783696 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 391-587
Cow position: chr11:26143927-26144112 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 391-587
Cow position: chr11:46884547-46884357 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 391-587
Cow position: chr11:50472490-50472301 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 391-587
Cow position: chr11:62230360-62230164 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 29

Conread position: 391-587
Cow position: chr11:71934776-71934971 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 28

Conread position: 391-588
Cow position: chr11:27913458-27913267 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 391-588
Cow position: chr11:58173807-58173608 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 158

Conread position: 391-588
Cow position: chr11:62889720-62889911 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 391-588
Cow position: chr11:66188149-66188334 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 391-591
Cow position: chr11:47412014-47411821 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 392-577
Cow position: chr11:37435819-37435994 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 392-580
Cow position: chr11:2836031-2835849 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 392-583
Cow position: chr11:28993577-28993750 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 392-585
Cow position: chr11:6094233-6094417 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 30

Conread position: 392-587
Cow position: chr11:10095514-10095327 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 392-587
Cow position: chr11:77745078-77745268 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 28

Conread position: 392-588
Cow position: chr11:35149573-35149381 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 28

Conread position: 392-588
Cow position: chr11:71111069-71110874 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 25

Conread position: 392-591
Cow position: chr11:40459276-40459087 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 15

Conread position: 393-581
Cow position: chr11:19549646-19549474 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 393-583
Cow position: chr11:17321835-17321635 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 27

Conread position: 393-587
Cow position: chr11:29659729-29659543 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 393-588
Cow position: chr11:41985878-41986063 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 394-537
Cow position: chr11:34144750-34144891 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 26

Conread position: 394-584
Cow position: chr11:26632844-26633027 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 394-584
Cow position: chr11:44017153-44016961 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 26

Conread position: 394-588
Cow position: chr11:35363666-35363464 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 74, 39

Conread position: 395-588
Cow position: chr11:32436513-32436317 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 23

Conread position: 395-588
Cow position: chr11:78820317-78820134 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 396-572
Cow position: chr11:83066659-83066486 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 24

Conread position: 397-583
Cow position: chr11:81406001-81406182 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 142, 23

Conread position: 399-584
Cow position: chr11:18508865-18509044 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 399-584
Cow position: chr11:31875258-31875079 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 408-588
Cow position: chr11:18791908-18792085 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 15

Conread position: 411-574
Cow position: chr11:34136393-34136237 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 9

Conread position: 420-573
Cow position: chr11:37982425-37982580 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 420-584
Cow position: chr11:58938593-58938758 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 37

Conread position: 420-588
Cow position: chr11:17278532-17278689 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 420-588
Cow position: chr11:33311132-33310956 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 424-576
Cow position: chr11:81614369-81614519 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 426-588
Cow position: chr11:34692996-34692836 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 56

Conread position: 428-541
Cow position: chr11:34279885-34279772 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 429-584
Cow position: chr11:35140049-35139894 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 39

Conread position: 429-588
Cow position: chr11:35536723-35536570 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 430-583
Cow position: chr11:36112556-36112411 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 430-584
Cow position: chr11:46747721-46747874 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 431-587
Cow position: chr11:2344389-2344234 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 41

Conread position: 431-590
Cow position: chr11:29482295-29482455 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 432-583
Cow position: chr11:31410744-31410890 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 435-587
Cow position: chr11:38236386-38236235 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 440-583
Cow position: chr11:79728537-79728680 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 28

Conread position: 445-581
Cow position: chr11:30211034-30210894 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 445-588
Cow position: chr11:48512287-48512147 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 445-588
Cow position: chr11:53717683-53717824 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 447-577
Cow position: chr11:33345566-33345439 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 448-577
Cow position: chr11:54334450-54334322 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 448-582
Cow position: chr11:34113390-34113253 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 449-588
Cow position: chr11:35669830-35669969 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 68

Conread position: 450-584
Cow position: chr11:65842951-65843087 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 87

Conread position: 450-588
Cow position: chr11:18587476-18587613 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 450-588
Cow position: chr11:61958621-61958761 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 18, 50

Conread position: 450-588
Cow position: chr11:71807444-71807586 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 134

Conread position: 451-568
Cow position: chr11:42067174-42067056 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 451-573
Cow position: chr11:16796344-16796222 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 13

Conread position: 451-583
Cow position: chr11:56290632-56290499 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 451-583
Cow position: chr11:70826069-70825936 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 451-583
Cow position: chr11:74720844-74720712 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 29

Conread position: 451-584
Cow position: chr11:41983047-41983180 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 451-584
Cow position: chr11:47585944-47586072 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 451-588
Cow position: chr11:5789779-5789917 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 451-588
Cow position: chr11:28644206-28644070 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 451-588
Cow position: chr11:63909548-63909681 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 451-588
Cow position: chr11:64867899-64868038 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 452-569
Cow position: chr11:61178477-61178359 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 452-583
Cow position: chr11:31228082-31227950 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 452-588
Cow position: chr11:62168214-62168348 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 454-577
Cow position: chr11:59916263-59916140 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 121

Conread position: 454-583
Cow position: chr11:62778559-62778430 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 114

Conread position: 454-583
Cow position: chr11:79018943-79019071 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 454-588
Cow position: chr11:16906933-16907066 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 98

Conread position: 455-584
Cow position: chr11:71767720-71767588 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 458-583
Cow position: chr11:70639958-70639833 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 29

Conread position: 458-588
Cow position: chr11:40478741-40478870 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 458-588
Cow position: chr11:62155750-62155621 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 459-583
Cow position: chr11:30805022-30805145 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 29

Conread position: 460-583
Cow position: chr11:51729398-51729274 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 460-588
Cow position: chr11:63919944-63920071 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 461-588
Cow position: chr11:84775182-84775057 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 464-587
Cow position: chr11:29946807-29946930 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 467-587
Cow position: chr11:3769205-3769325 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 467-588
Cow position: chr11:15373943-15373821 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 35

Conread position: 467-588
Cow position: chr11:62609708-62609587 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 470-583
Cow position: chr11:27565431-27565321 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 18

Conread position: 470-584
Cow position: chr11:62808406-62808519 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 470-588
Cow position: chr11:1362367-1362485 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 472-588
Cow position: chr11:15682881-15682997 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 472-588
Cow position: chr11:20602325-20602210 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 475-583
Cow position: chr11:377546-377654 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 484-588
Cow position: chr11:33527139-33527034 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 484-588
Cow position: chr11:36987036-36986932 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 485-588
Cow position: chr11:34106584-34106687 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.